Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq26980 168 1e-36 seq78338 150 3e-31 seq78340 147 4e-30 seq78339 147 4e-30 seq26979 132 9e-26 seq589241 89.7 9e-13 seq161571 84.2 4e-11 >seq26980 Length=2195 Score = 168 bits (186), Expect = 1e-36 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||||| ||| ||||||| || || |||| ||| || |||||| Sbjct 1422 AATTTGCATTCCACCTCTCAGTCGTAGTACCAAGTGTAAAGTAGACTCCTTCTGAATATT 1363 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| |||| || | ||| || | || ||||| |||||||| | ||| || || Sbjct 1362 GTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCTGCAAAAATAAGTCTTTGCTG 1303 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || ||||| |||||||| || ||||| | ||| | |||| ||| ||||| || Sbjct 1302 ATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGA 1243 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || ||||||||||||||| ||||| || || || || || || || || ||||||||| Sbjct 1242 AGGCTCAACTTCTAGAGTGATAGTCTTGCCAGTCAGTGTCTTCACGAAAATTTGCATT 1185 Score = 159 bits (176), Expect = 6e-34 Identities = 178/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||||| || ||||| | ||| || |||| || || ||||| Sbjct 2106 AATTTGCATCCCACCTCTCAGACGCAGTACTAAATGTAAAGTAGATTCCTTTTGTATATT 2047 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||||||| | || | ||| || | ||||||||| |||||||| | || ||||| Sbjct 2046 ATAGTCGGAGAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTG 1987 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||||||||| || || |||| || | |||| ||| || || || Sbjct 1986 ATCTGGAGGAATGCCTTCTTTATCCTGAATCTTGGCCTTGACATTTTCAATTGTGTCAGA 1927 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||||| ||| |||||||| || || || || || ||||| ||||||||| Sbjct 1926 AGCTTCCACTTCTAAAGTAATAGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCATT 1869 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| || | || || || | ||||| |||| || || ||||| Sbjct 1194 AATTTGCATTCCACCCCTGAGACGCAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATT 1135 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| |||| || | ||| || | ||| |||||||| ||||||| ||||||||| Sbjct 1134 ATAGTCCGATAGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTG 1075 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| || || | || | || || ||||| || Sbjct 1074 ATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTCACGTTCTCGATTGTATCAGA 1015 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| | || || ||||| || |||| |||||||| || |||||||| Sbjct 1014 AGCTTCTACTTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTACGAAAATTTGCAT 958 >seq78338 Length=1389 Score = 150 bits (166), Expect = 3e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||| || || ||||||| ||| | ||| | ||||| |||||| Sbjct 263 ATTTGCATACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTG 204 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | | ||| || ||||| || || || ||||| | | |||||| Sbjct 203 TAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGA 144 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || || |||||||| ||||| ||||| | ||||| |||| |||||| || || Sbjct 143 TCAGGTGGGATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGTCAGAG 84 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||| || || ||||| || || ||||| ||||| ||||| || ||||| Sbjct 83 GGCTCCACTTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| |||| | || ||||||| |||| || | |||||| ||||| ||||| Sbjct 713 ATACCTCCTCGGAGACGGAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCA 654 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || || || ||||| || | | |||||||| ||| Sbjct 653 GACAGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGA 594 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| ||||| || || | ||| | |||| ||||||||| || | |||| Sbjct 593 GGAATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCA 534 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| | ||||| ||||| || || || ||||| ||||||||||||||| Sbjct 533 ACTTCCAAGGTTATTGTTTTGCCAGTAAGTGTTTTGACAAATATTTGCATT 483 Score = 111 bits (122), Expect = 3e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | ||||| || | |||| || | |||||| |||||| Sbjct 491 ATTTGCATTCCACCACGGAGACGAAGCACTAAGTGCAGAGTCGACTCTTTTTGAATATTG 432 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || || || | | ||| || ||||| || || |||||||| | | |||||| Sbjct 431 TAATCAGACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGG 372 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || || ||||| ||||| || | || | ||| ||| || || || Sbjct 371 TCTGGGGGGATGCCCTCCTTATCCTGTATCTTAGCCTTCACATTCTCAATTGTGTCAGAT 312 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || || || || || |||||||| || || |||||||||||||| Sbjct 311 GGTTCTACTTCCAGGGTAATGGTCTTGCCTGTTAGGGTCTTGACAAATATTTGCAT 256 >seq78340 Length=230 Score = 147 bits (162), Expect = 4e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 193137 CCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAAC 193196 ||||| || |||||||| | ||| || |||| ||||| |||||| ||||| || | Sbjct 230 CCTCTTAAACGAAGTACTAAATGTAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGT 171 Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256 || | | ||| || ||||| || || || ||||| | | |||||||| ||||| || Sbjct 170 GTACGACCATCTTCCAATTGCTTGCCTGCGAAAATAAGACGTTGTTGATCTGGAGGAATG 111 Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 |||||||||||||| ||||| | |||| |||| ||| || || || | ||||||||| Sbjct 110 CCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCT 51 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || || ||||| || || || ||||| ||||| |||||||| Sbjct 50 AATGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAGATTTGCAT 7 >seq78339 Length=2434 Score = 147 bits (162), Expect = 4e-30 Identities = 174/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| ||| || ||||| ||||| | || | ||| || || || Sbjct 2200 ATTTGCATACCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTG 2141 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| ||||| || | ||| || ||||| || |||||||| || | | |||||| Sbjct 2140 TAGTCTGATAAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGA 2081 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || ||||||||||| || || | |||| |||| ||| || || || Sbjct 2080 TCTGGGGGAATGCCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGAT 2021 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || || |||||||| || |||||||| || || |||||||||||||| Sbjct 2020 GGCTCCACCTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 Score = 93.3 bits (102), Expect = 8e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||| | || ||||||| || | || | |||||| ||||| Sbjct 2428 ATTTGCATACCGCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTG 2369 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | ||| || | ||| || || ||||| || | | ||||| Sbjct 2368 TAGTCAGACAGAGTGCGGCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGG 2309 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || || || || ||||| ||||| || | || | ||| ||| || || || Sbjct 2308 TCAGGGGGGATACCCTCCTTATCCTGTATCTTAGCCTTCACATTCTCAATTGTGTCAGAT 2249 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || || || || || ||||| | ||||| |||||||||||||| Sbjct 2248 GGTTCTACTTCCAGGGTAATGGTCTTTCCTGTCAATGTTTTGACAAATATTTGCAT 2193 >seq26979 Length=899 Score = 132 bits (146), Expect = 9e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| || | || || || | |||| ||||| || || |||||| Sbjct 543 AATTTGCATTCCACCCCTTAGACGCAGGACTAAGTGCAGTGTAGATTCCTTTTGAATATT 484 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| |||| ||||| || || ||||| | || ||||| Sbjct 483 ATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTTTGTTG 424 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| ||||| || ||||| | || | |||| || ||||| || Sbjct 423 ATCTGGAGGAATACCTTCCTTATCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGA 364 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||||| || || ||||| ||||| || ||||| ||||| ||||||||| Sbjct 363 AGCTTCCACTTCTAATGTGATTGTTTTGCCTGTCAGTGTTTTAACAAAAATTTGCATT 306 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||| || | || | || | ||||| |||| || || ||||| Sbjct 315 AATTTGCATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTTTGGATATT 256 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | ||| || | ||| ||||| || ||||| | ||| ||||| Sbjct 255 ATAATCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTG 196 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| || || | || | |||| ||| ||||| || Sbjct 195 ATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCAATTGTATCAGA 136 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||||| ||| || ||||| || || || ||||||||||| |||||||| Sbjct 135 AGCTTCCACTTCTAAAGTAATCGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 Score = 109 bits (120), Expect = 1e-18 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 |||||||| ||||||||||| || || || || |||||||| ||||| ||||| | || Sbjct 899 GCAAAAATCAATCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTA 840 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | |||| || ||||| |||| |||||||| | || || ||||| || || || || Sbjct 839 ACATTTTCTATTGTATCTGAAGCTTCAACTTCCAATGTGATGGTTTTGCCAGTCAGTGTC 780 Query 193344 TTTACAAATATTTGCATT 193361 |||||||| ||||||||| Sbjct 779 TTTACAAAAATTTGCATT 762 >seq589241 Length=679 Score = 89.7 bits (98), Expect = 9e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 159886 TATCCGATGAAGTAATTCATCTATTATTTTCTGCAAATAGATGGGAAAAATATAATGAAA 159945 |||| |||||| || ||||| || ||||||||||| ||||||||||| ||| | | Sbjct 195 TATCTAATGAAGCTATCCATCTCTTGTTTTCTGCAAACCGATGGGAAAAAGTTAACTATA 136 Query 159946 TAATTAAAACGTTAGAAATGGGTATTACTATAATTATGGATAGATATTGCTATTCCGGAG 160005 ||| ||| ||| || ||| | ||| | ||| ||||| | ||||||||||| || | Sbjct 135 TAAAAGAAAAGTTGCTAAATGGTGTAACTGTTATTGTGGATCGTTATTGCTATTCAGGTG 76 Query 160006 TAGCTTATTCAGCATCTAAAGGTA 160029 | || ||||| || | ||||||| Sbjct 75 TGGCATATTCTGCTGCAAAAGGTA 52 >seq161571 Length=730 Score = 84.2 bits (92), Expect = 4e-11 Identities = 87/110 (79%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 263788 TAATAAAGGGAGGTCCGTAGCTACTATGTAAGCCGGTGCTGACGAGGAACCGGTCTAACT 263847 || ||| || |||||||||||||| |||| |||||| || | ||| |||| | | | Sbjct 194 TACTAACGGAGGGTCCGTAGCTACTGAGTAAACCGGTGATGGCAGGGAGCCGGCCAACTT 135 Query 263848 CCTTGTCATCAGATATGTTGAAGCG-TAT-AAGCAATCATATAATGGTAA 263895 || || || |||||||||||||||| ||| |||||||||||| |||||| Sbjct 134 CCCTGCCAACAGATATGTTGAAGCGTTATAAAGCAATCATAT-GTGGTAA 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 892545151000320