Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq227148 140 9e-28 seq8549 113 1e-19 >seq227148 Length=2115 Score = 140 bits (154), Expect = 9e-28 Identities = 574/894 (64%), Gaps = 26/894 (3%) Strand=Plus/Minus Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACG 155531 || ||||| || |||||||| | || ||||||||| || || ||| ||| || | Sbjct 1026 GGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTTAC-AAT--CTTTGTGATT 970 Query 155532 TCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATA 155591 ||| ||| || | | | |||| | |||| ||| |||||||| ||| | || Sbjct 969 TCTTTTAACTTTTTAAAATTAAATCTCTTATTTTCA---ACAAACATGTTAAGTGCTATG 913 Query 155592 GACGCCAGATTACATACCGCAG--TCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGC 155649 || || || ||||| || || ||| ||| | | | |||||| |||| |||| || Sbjct 912 GAAGCAAGGTTACAAACTGCCACTTCTTCTTCT-GAAG-TGTATTGCACAACCTCAGTGC 855 Query 155650 ACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCAT 155709 | || || || || || ||||| | ||| || || ||| || ||||||||||||| Sbjct 854 AAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACTCTTCCTGTTACAAGCAT 795 Query 155710 CCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT---CTTTAGCC 155766 |||| |||| |||||||| || || ||||| | || || || | ||| ||| || Sbjct 794 CCTTATATAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATTGACTT---CC 738 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACA 155826 | | || | || | ||| || | ||| ||| |||||||| |||| | Sbjct 737 ATAACTCTTGAGCTCGGACTTGTTTTATAAATCGTGTTTCTTCTTCATATTTGGTATATA 678 Query 155827 GCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 | | | | ||||| || ||||| ||| || || || || | || || || | | Sbjct 677 GTTCTTCGAATTCCTCTCCATAACAGTCAGCGAGGCCGGGACAATCATGAGGACACATGA 618 Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 | ||||| | || | ||| | | |||||| | |||| ||| | ||||| Sbjct 617 GACTCCAAACGTCATCATTTTCTACTCTTTTCATAAACAGATCAGGAATCCATAAAGCAT 558 Query 155947 AGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATT 156006 | || || || || || | || || | || ||||||| || |||||||| | Sbjct 557 AAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTATTCTTCTTTAAATCTAAGAACT 498 Query 156007 CCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---C 156063 | || || | ||| ||||| | ||| || ||||| |||| | ||| | Sbjct 497 CAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCACCAGGGCGTTTGTTTC 438 Query 156064 CACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCAT 156123 |||| ||||||||||| | ||||| || || | || | | ||| || | | ||||| Sbjct 437 CACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCAT 378 Query 156124 TGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATT--ATGAATATG 156181 | || |||||| || || || | ||||| ||||| || ||| |||| Sbjct 377 TCGAGACGCCATTAGTGCCAGCTATGTAAGAACCC--TGAGCTCTGATGCAATGTGTATG 320 Query 156182 TAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 || || || ||||| | ||||||||||| || || | |||| ||||| ||||| Sbjct 319 TAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACACTGTTTTAAAGTATCAAAAAT 260 Query 156242 ACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGG 156301 ||||||||| ||| |||| ||| | || || |||| || | || || ||||| Sbjct 259 ACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAAGAGGAAAGCTGTGGCCGTGG 200 Query 156302 TGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 ||| | || ||| |||||||| |||| || ||||||| || | ||||| Sbjct 199 TGTAGCTGCTGAGAACAGTGTAGGGCTTGCGTGTGTAAAATATTTCTCCGACAT 146 >seq8549 Length=4112 Score = 113 bits (124), Expect = 1e-19 Identities = 190/272 (70%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| ||||||||||| ||||| ||||| ||| || |||||||| || ||| Sbjct 2262 TCCATAGCCTTTATTAAACGACGTTGAATGTAACCCGTTTCAGCAGTTTTTACTGCAGTA 2203 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| ||||| ||||||| ||||| || ||||| | | ||| ||| | || Sbjct 2202 TCAATAAGACCTTCACGACCTCCCATGGCGTGGAAATAAAACTCAGAGGGTGTCAAGCCG 2143 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751 ||| | || | || |||||||| | | || || || ||||||| ||| | Sbjct 2142 GCAAGGTATGAATTTTCGACGAAACCTCTAGATTCTGGACCGTAATCGTC---TTTGATG 2086 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || ||||||| || || || | | ||| | || ||||||||||| ||||||||||| Sbjct 2085 AAATGTGGCAATGTTCTTTTACGAAAACCGAAAGGAATACGCTTTCCTTCAACGTTCTGT 2026 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | || | ||| | ||| || || || Sbjct 2025 TGCCCTACACAAGCAATAACCTGTGAGATGTT 1994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1459896238035312