Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1160 141 1e-27 seq123104 102 1e-15 >seq1160 Length=2104 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | || | ||||| |||||| | ||| | | || Sbjct 1899 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 1840 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| |||||||| |||| || || || ||||||| | ||||||| |||| | Sbjct 1839 TCGTGGACCGCTTGTTGTAGTGAGCGAGTCGCGACGCCTCGGCGGCGATGCGCTCGAAGA 1780 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||||| |||| |||||||||| ||| |||| Sbjct 1779 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATGCCGGTGTCCGGGT 1720 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || |||||||| ||||||||| Sbjct 1719 GGACTTGTTTGAGCACTTTGTAGATG 1694 >seq123104 Length=909 Score = 102 bits (112), Expect = 1e-15 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || || || |||| |||||| | || | || |||||| Sbjct 322 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGAACTTCCCTCGACGTGATCGTT 381 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | |||||| |||||||||||||| ||||||| ||||||| || | || ||| Sbjct 382 GACCTCTTGTTGTAGTGCGCCAGACGGGACGCCTCGGCCGCGATGCGTTCAAAAATATCG 441 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 || ||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| ||| Sbjct 442 TTAACAAAGGAATTCATAATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 501 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||| || || ||| Sbjct 502 TGCTTCAGCACTTTATAAATG 522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6055259876959792