Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1160 185 1e-40 seq123104 111 2e-18 >seq1160 Length=2104 Score = 185 bits (204), Expect = 1e-40 Identities = 188/243 (77%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||| |||||| |||||| ||| Sbjct 1938 TGTACTTGGTGACGGCCTTGGTGCCCTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 1879 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 | || | ||||| |||||| | ||| | || ||||||| |||||||| ||| Sbjct 1878 ACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGATCGTGGACCGCTTGTTGTAGT 1819 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| ||| | ||||||| | ||||||| |||| |||||||| || |||||||| Sbjct 1818 GAGCGAGTCGCGAC--GCCTCGGCGGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTT 1761 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||||| ||| |||||||||| ||| ||||| || || |||||||| || Sbjct 1760 CATGATGGACATCGCCTTGCTGGAGATGCCGGTGTCCGGGTGGACTTGTTTGAGCACTTT 1701 Query 1485708 GTA 1485710 ||| Sbjct 1700 GTA 1698 >seq123104 Length=909 Score = 111 bits (122), Expect = 2e-18 Identities = 169/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 || || ||||||||||| || ||||| ||| ||||| | || || |||||| | | | Sbjct 280 TATTTAGTGACGGCCTTCGTTCCCTCGCTGACAGCGTGTTTCGCGAGCTCGCCGGGAAGG 339 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || || |||| |||||| | || | | |||||| | |||||| | || Sbjct 340 AGGAGACGGACGGAGGTCTGAACTTCCCTCGACGTGATCGTTGACCTCTTGTTGTAGTGC 399 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||||| ||| ||||||| ||||||| || | || ||||| ||||| || ||||| Sbjct 400 GCCAGACGGGACGCCTCGGCCGCGATGCGTTCAAAAATATCGTTAACAAAGGAATTCATA 459 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||||| | || | ||||| || ||| ||||| |||||||| ||||| || ||| Sbjct 460 ATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACCTGCTTCAGCACTTTATAA 519 Query 1485712 A 1485712 | Sbjct 520 A 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7848998955525264