Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq19446 120 2e-22 seq26980 107 1e-18 seq422991 102 5e-17 seq78338 102 5e-17 seq78339 96.9 2e-15 seq26979 93.3 3e-14 >seq19446 Length=4212 Score = 120 bits (132), Expect = 2e-22 Identities = 515/798 (65%), Gaps = 27/798 (3%) Strand=Plus/Minus Query 5743 GTGTACGTTTCGCCTGGG-TTCCACGATGGAGCGAACAGAGGTGTCTGGTGTCCCAGATC 5801 ||||| ||||| | |||| ||||| | || ||| ||| ||||| || ||||| ||| Sbjct 2427 GTGTAGGTTTC-CTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGT 2369 Query 5802 --CGTCAACGACCAGGCACCCTTGTAATCGTACGTCATGACAAATATGTGATCAAGGTAT 5859 ||| |||||||| |||||| | || || |||| | || || ||||| | || Sbjct 2368 ATCGTTT--GACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 2311 Query 5860 TTTTGTGCGGTGGCGTAGTCGACGACGTCGATCTTGTCGTGTCCCGCGCCGACGGCGCTC 5919 ||||| || || ||||||| ||||| | ||| || || ||| |||| | || Sbjct 2310 TTTTGAGCCTTGCCGTAGTCAACGACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAA 2251 Query 5920 GTCAACT-GTAGCCGTCTACCCCGCTTCTCGCCCAACTCATCAAGCATCACGCGAAGTTC 5978 || || | ||| | |||| ||| | | ||||| |||||| | || | ||| Sbjct 2250 GTTAATTCGTATTTCT-TACCATTCTTAGCTGAGAGTTCATCGAGCATCTCACGTAATTC 2192 Query 5979 CCGCAGCAAAAGAGTGTAGGTGTTGCGATCCACCTCGGCATTACCCAACACAGAATTGGC 6038 || |||| ||| | | ||| | | ||| |||| | ||| || || Sbjct 2191 TTTCATCAAACTTACATAGCAATCACCATCTTC-TGGGC--TACCGAGATCAGGGTTAGC 2135 Query 6039 ACCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCAGGTCTC 6098 ||| || ||||| || |||||||| ||||| || || || || ||||| ||||| || Sbjct 2134 ACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAG 2075 Query 6099 CAGAAACTCGCGGACGCTTGTGAC-GAACACCTCACG----CTTAGAGTCATCGTTCATG 6153 || ||||| || |||| | ||| || | |||||| | || || Sbjct 2074 AAGGAACTCCTTTAC-----TGACTGCACAAATCGTGTTCTCTTAGATTTGTCAA-CAAA 2021 Query 6154 AAATAA-AACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGAGGG 6212 ||| || || ||||| | ||||||||| || || || || || | | | || || Sbjct 2020 AAAGAAGAAAGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTAATTCAGG 1961 Query 6213 GTTGTGACGTTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTACGC 6272 | |||| | | ||| | ||||||||||| || ||||| ||||| | | Sbjct 1960 GCGAGCTTGTTTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGA 1901 Query 6273 CTCAACACCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTTGAA 6332 | ||||| ||||||||||| || || ||||| ||||| || || ||||| Sbjct 1900 AGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAA 1841 Query 6333 GTCATCGCGACCAGCGCAGGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCTTG 6390 ||| || || || |||||| ||| || || | ||| | || ||||| || Sbjct 1840 GTCCTCACGGCCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTC--AATCTCTTTT 1783 Query 6391 AGGGCGTCGTTTATGCCGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTC 6450 | | ||| || |||||| ||| || ||||||||||| || ||||| |||| || || Sbjct 1782 AAGCTGTCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTA 1723 Query 6451 AGATTAGGTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCACG 6510 ||||||||||| |||| || | ||| || | || ||| || ||||| || ||| Sbjct 1722 AGATTAGGTATAGGTATGCGATCCACGGGGAATTTCCTAGGATAGACGCCCCATTCTACG 1663 Query 6511 AAATACGCACCGACGACT 6528 || || ||||| || ||| Sbjct 1662 AAGTAGGCACCCACAACT 1645 >seq26980 Length=2195 Score = 107 bits (118), Expect = 1e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||| | | ||| || | ||| | || |||||||| || |||||||||| Sbjct 1186 TTCCACCCCTGAGACGCAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCCG 1127 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| | ||| |||| |||||||||||||||||||| || |||| || || ||| | | Sbjct 1126 ATAGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATCTGGAG 1067 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || ||| || ||| | || | ||| || || | Sbjct 1066 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTCACGTTCTCGATTGTATCAGAAGCTTCTA 1007 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | || | || ||||| || || || | ||| ||||| || || |||||||| Sbjct 1006 CTTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTACGAAAATTTGCATGAT 955 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | || |||| ||| | || |||||||||||| || ||||| | Sbjct 1414 TTCCACCTCTCAGTCGTAGTACCAAGTGTAAAGTAGACTCCTTCTGAATATTGTAGTCAG 1355 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| |||| |||| || || |||||||| || || || |||| |||||| ||| | | Sbjct 1354 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCTGCAAAAATAAGTCTTTGCTGATCTGGGG 1295 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | ||||| ||| || | | || | ||| | ||| | Sbjct 1294 GAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 1235 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || ||||| || || || ||||| || || || ||||| Sbjct 1234 CTTCTAGAGTGATAGTCTTGCCAGTCAGTGTCTTCACGAAAATTTGCAT 1186 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| | ||| |||| || | ||| || |||||||| || ||||| | Sbjct 1870 TTCCACCTCTCAGGCGCAGTACCAAATGTAAGGTAGATTCTTTCTGAATATTGTAGTCTG 1811 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| || ||||||||||| || || || |||| |||||| ||| | | Sbjct 1810 ACAGTGTGCGTCCATCTTCAAGTTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 1751 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | |||||||| || | || || ||| || | | || | ||| | ||| | Sbjct 1750 GAATACCCTCCTTATCCTGAATCTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 1691 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || || || || || ||||||||||| || ||||| Sbjct 1690 CTTCCAGTGTGATAGTTTTGCCAGTTAGTGTCTTTACAAAAATTTGCAT 1642 >seq422991 Length=614 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || | | || |||| || || || || || || ||| Sbjct 53 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 112 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||||||||||| | || | || ||||| || | || || ||| || | Sbjct 113 ATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTT 172 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| ||| || || |||| ||| ||||| || ||||| |||||||| || Sbjct 173 TCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 232 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 233 AAAATTTGCAT 243 >seq78338 Length=1389 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||| |||||||| || ||||| || || | || |||| ||| Sbjct 920 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCC 861 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||| || || ||||| |||||| | || | ||||| ||||| | Sbjct 860 AGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGAATACCCTCTTTGTCTTGG 801 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || ||| ||| || | | || | || || || || || | || || || || Sbjct 800 ATCTTTGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTG 741 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||||||||||||||| Sbjct 740 CCTGTGAGTGTCTTTACAAAGATCTGCAT 712 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||| |||||||| || |||| |||| |||| || || || || ||| Sbjct 1130 TCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAG 1071 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || || |||||| | || | ||||||||||| | || || || || | Sbjct 1070 ATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 1011 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || || | || |||||||| || || || ||||| ||| Sbjct 1010 TCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACA 951 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 950 AAGATCTGCAT 940 >seq78339 Length=2434 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||| ||||| || || ||||| || || |||| |||| Sbjct 2404 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGCCATCT 2345 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||||||||| || || ||||| || ||||| ||||| | || | |||||||| || Sbjct 2344 TCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCC 2285 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||| || || || || || || | ||| | || || || | ||| |||| Sbjct 2284 TGTATCTTAGCCTTCAC--ATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGG 2227 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || | || || ||||| || ||||| Sbjct 2226 TCTTTCCTGTCAATGTTTTGACAAATATTTGCAT 2193 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| ||||| ||||| || |||| | || |||| |||| ||||||||| || || Sbjct 1699 TCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAATTGCTTTCCAGCAAAA 1640 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || | || |||||| | || | || || ||||| | || ||| || ||| | Sbjct 1639 ATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTT 1580 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||| || || | || ||||| ||||| || || ||||| ||| Sbjct 1579 TCAATTGTGTCAGAAGGCTCTACTTCTAACGTGATGGTTTTTCCAGTAAGAGTCTTAACA 1520 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 1519 AAGATCTGCAT 1509 >seq26979 Length=899 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || || ||||| || || || |||| |||| |||||||||||||| ||||| Sbjct 269 TCCTTTTGGATATTATAATCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAA 210 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||||| ||| || ||| | || | || |||||||| | || ||| || || | Sbjct 209 ATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTT 150 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || || || || | || || || ||||| || || || |||||| Sbjct 149 TCAATTGTATCAGAAGCTTCCACTTCTAAAGTAATCGTTTTTCCAGTCAGTGTTTTTACA 90 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 89 AAAATTTGCAT 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323183452596944