Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq14063 253 2e-62
seq19446 172 4e-38
seq26980 98.7 8e-16
seq26979 96.9 3e-15
seq422991 93.3 3e-14
seq78339 86.0 5e-12
>seq14063
Length=7913
Score = 253 bits (280), Expect = 2e-62
Identities = 373/526 (71%), Gaps = 34/526 (6%)
Strand=Plus/Plus
Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627
|| || |||| ||| ||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct 6654 AATGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 6713
Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687
|||||| |||| ||| ||||| || || ||||| ||| |||||||||| |||
Sbjct 6714 ATTATGAAATGGGTTCCGGGTGACGATCCCGCGAAGGATCACCAGCGGTGGGCGCCCCAG 6773
Query 103688 TGTCCGTTCCTGaaaaaaaCGGCTGCTGGCGCGCTGC---------CCGCCGG---CCTT 103735
|| || |||||| |||| || |||| || | |||| | || |
Sbjct 6774 TGCCCCTTCCTG-------CGGCGGCAGGCGGACTCCGGCAACGTGCCGCGTGAGTCCGT 6826
Query 103736 GCG-------ATG---GACGGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCGTCCACCAA 103785
|| | | | ||| || || |||||||| ||| |||||| ||| | ||
Sbjct 6827 GCCCGCGCCCACGCCCGCCGGCCACGATGAGTGCGGGGTGCGCGCGC--CCG--CGCCCG 6882
Query 103786 CGCCTGCGTGC-GCATGCCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGT 103844
||||||| | ||||||||||||||| |||| | || | |||||||||||| | |
Sbjct 6883 CGCCTGCCCCCCGCATGCCCGGCCCCGTGCACGCGCGCTACGCCTCCGAGGCGGCCCGCC 6942
Query 103845 TACAAACTTTTAAGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAG 103904
| | | || | || ||||| || ||| ||||||||||||| ||| | | |||||||
Sbjct 6943 TGCGCTCCTTCAGCGACTGGCCACGCAGTATGAAACAGAAACCCGAGGAACTCGCCGAAG 7002
Query 103905 CCGGATTCTACTACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTC 103964
| ||||||| ||||||||||| | ||||| || || ||||||||||| ||||| || |
Sbjct 7003 CGGGATTCTTTTACACCGGCCAGGGTGACAAAACAAAGTGCTTCTACTGTGACGGCGGCC 7062
Query 103965 TAAAGGATTGGGAGCACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTT 104024
| ||||| |||||| | || || | ||||||| | || ||||||| | || ||| |
Sbjct 7063 TCAAGGACTGGGAGAATGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGT 7122
Query 104025 GCGCATACGTGCTACTTGTCAAGGGCCACGATTATGTACAAAAGGT 104070
|||| ||||||| ||| |||||||| | || || || || |||||
Sbjct 7123 GCGCTTACGTGCAACTGGTCAAGGGTCGAGAGTACGTCCAGAAGGT 7168
>seq19446
Length=4212
Score = 172 bits (190), Expect = 4e-38
Identities = 337/496 (68%), Gaps = 14/496 (3%)
Strand=Plus/Plus
Query 29072 TGCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGTGCCGCT 29131
||| || || |||||||||||||| ||| | || || || || || | || |
Sbjct 1654 TGCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGATCGCATACCTAT 1713
Query 29132 GCCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGGCTCAA 29191
|| || || | ||| || | ||||| || || || ||||||||||| ||||| ||||
Sbjct 1714 ACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 1773
Query 29192 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAGGGCCG 29251
||| | | ||| ||| ||||||||| | || ||||| || || |||| |||||
Sbjct 1774 TGACAGCTTAAAAGAGATTGAAGGCAGTTTTCAAGCACTGCAGCGGTCCTGCAGCGGCCG 1833
Query 29252 TTCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAAAAGGG 29311
| || ||||||||| | || |||||||| ||||| || |||||||||| ||||| ||
Sbjct 1834 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1893
Query 29312 CGTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGC----GGCCA 29367
||||| | |||||||||||||||||||| ||||| || || ||||| | ||
Sbjct 1894 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCATTAAAACA 1953
Query 29368 AGCTGGCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGACC 29427
|||| || || | | || ||||| || || || || || ||||| | | || |
Sbjct 1954 AGCTCGC----CCTGAATTAAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATC 2009
Query 29428 C---GTTCTATTTCATGCACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAG 29484
| |||| ||| | || | | | | | || |||||| | || || | |
Sbjct 2010 CTTTCTTCTTTTTTGTTGACAAATCTAAGAGAACACG---ATTTGTGCAGTCAGTAAAGG 2066
Query 29485 AATTTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTG 29544
| || || | ||||| || || || || || || || || |||||||| || ||||
Sbjct 2067 AGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTG 2126
Query 29545 GCAAAGGCGCCAACCC 29560
||||||| || |||||
Sbjct 2127 GCAAAGGTGCTAACCC 2142
>seq26980
Length=2195
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 107540 TTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGT 107599
|||| | || || | ||||||||||| || ||||| ||||| || |||||||| || |
Sbjct 942 TTATTACAGATTCATCATGCAAATTTTCGTAAAAACCTTAACTGGGAAAACCATCACATT 1001
Query 107600 CGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGG 107659
||| || ||| ||||| ||| | || || ||||||| || || |||||
Sbjct 1002 GGAAGTAGAAGCTTCTGATACAATCGAGAACGTGAAGGCAAAGATTCAAGACAAGGAAGG 1061
Query 107660 CGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAAC 107719
| | || ||||| |||||||| |||| || || || || ||||| || | ||
Sbjct 1062 CATTCCTCCAGATCAACAGAGACTAATTTTCGCCGGAAAGCAACTGGAAGATGGGCGGAC 1121
Query 107720 AATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
| | ||||||| || || || ||||| ||||| |||||| | ||| ||
Sbjct 1122 ACTATCGGACTATAATATCCAGAAGGAATCTACTTTGCACTTAGTGCTG 1170
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/234 (69%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| || || || | || ||||| || || || | ||| ||| ||
Sbjct 1185 AATGCAAATTTTCGTGAAGACACTGACTGGCAAGACTATCACTCTAGAAGTTGAGCCTTC 1244
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || ||| || ||| |||||||| || | ||| |||||
Sbjct 1245 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 1304
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
||| |||||||||| ||| || || ||||| || |||||| ||| | | ||||
Sbjct 1305 GCAAAGACTTATTTTTGCAGGAAAGCAGCTTGAAGATGGACGC----ACACTATCTGACT 1360
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|||| ||||| ||||||||||| || ||| |||| | || || |||| ||||
Sbjct 1361 ACAATATTCAGAAGGAGTCTACTTTACACTTGGTACTACGACTGAGAGGTGGAA 1414
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/234 (69%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || |||| |||||||| || || | ||| ||| ||
Sbjct 1641 AATGCAAATTTTTGTAAAGACACTAACTGGCAAAACTATCACACTGGAAGTTGAGCCTTC 1700
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || ||| |||||| ||||| || || | ||| |||||
Sbjct 1701 TGATACAATTGAAAATGTTAAAGCGAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCA 1760
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
||| |||||||||| ||| || || || || || |||||| ||| || | ||||
Sbjct 1761 GCAAAGACTTATTTTTGCTGGAAAGCAACTTGAAGATGGACGC----ACACTGTCAGACT 1816
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|||| ||||| || || ||||| || || |||| || | || |||| ||||
Sbjct 1817 ACAATATTCAGAAAGAATCTACCTTACATTTGGTACTGCGCCTGAGAGGTGGAA 1870
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || || || ||||||||||| || | ||| || |||
Sbjct 1413 AATGCAAATTTTTGTAAAGACATTGACTGGCAAAACCATCACATTGGAAGTAGAAGCTTC 1472
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || || ||| ||| || |||||||| | || || ||
Sbjct 1473 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATCCCTCCTGACCA 1532
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| || |||| ||| || ||||||||||| || | ||| || | || || ||
Sbjct 1533 ACAGAGGCTAATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 1592
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
||||| ||||| || || |||||| | ||| ||
Sbjct 1593 TATTCAGAAGGAATCAACCTTGCACTTAGTGCTG 1626
Score = 86.0 bits (94), Expect = 5e-12
Identities = 144/208 (69%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || | || |||||||| ||||| | ||| ||| |||
Sbjct 1869 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACTATTACTTTAGAAGTGGAAGCTTC 1928
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || || |||||| |||||||||||| | || |||||
Sbjct 1929 TGACACAATTGAAAATGTCAAGGCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGATCA 1988
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
|| || ||||||| ||| || ||||| || || |||||| ||| | | ||||
Sbjct 1989 ACAAAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGC----ACACTCTCCGACT 2044
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCA 107758
| || || |||||||| ||||| || ||
Sbjct 2045 ATAATATACAAAAGGAATCTACTTTACA 2072
>seq26979
Length=899
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| ||||| | || ||||| || |||||| | ||| ||| ||
Sbjct 534 AATGCAAATTTTTGTTAAAACACTTACTGGCAAGACTATTACCCTTGAAGTTGAGCCTTC 593
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || ||| ||| ||| ||||| || || | ||| || ||
Sbjct 594 TGACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCA 653
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
||||| ||||||| ||| || ||||| || || |||||| || || | ||||
Sbjct 654 ACAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGACGC----ACTTTGTCAGACT 709
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|||| |||||||| || ||||| |||||| ||||
Sbjct 710 ACAATATTCAAAAAGAATCTACCTTGCACTTGGT 743
Score = 93.3 bits (102), Expect = 3e-14
Identities = 151/217 (70%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||||||||| ||||| | || || ||||| ||||| | ||| ||| |||
Sbjct 79 ATGCAAATTTTTGTAAAAACACTGACTGGAAAAACGATTACTTTAGAAGTGGAAGCTTCT 138
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||||| || || |||||| | || |||||
Sbjct 139 GATACAATTGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 198
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731
|| ||||| |||| || || || || ||||| |||||| ||| || | || ||
Sbjct 199 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGACGC----ACACTGTCAGATTA 254
Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| || |||||||| ||||| |||||| | ||||||
Sbjct 255 TAATATCCAAAAGGAATCTACTTTGCACTTAGTGTTG 291
Score = 87.8 bits (96), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 8/209 (4%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| ||||| | ||||||||||| || || | ||| ||| |||
Sbjct 306 AATGCAAATTTTTGTTAAAACACTGACAGGCAAAACAATCACATTAGAAGTGGAAGCTTC 365
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || || ||| ||| ||||| ||||| | || |||||
Sbjct 366 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGATAAGGAAGGTATTCCTCCAGATCA 425
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
|| || || |||| || || |||||||| || |||||| || || | ||||
Sbjct 426 ACAAAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGC----ACTCTGTCTGACT 481
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCAC 107759
| || ||||||||||| ||||| |||||
Sbjct 482 ATAATATTCAAAAGGAATCTACACTGCAC 510
>seq422991
Length=614
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| ||||| || | || || |||||||||||| | || ||| ||
Sbjct 244 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAAGCCTC 185
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| | | | |||||| ||||| ||||| ||||| | || || ||
Sbjct 184 TGATACTATAGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACCA 125
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| || | || | ||| ||||||||||| || || | ||| || | ||||||||
Sbjct 124 GCAACGATTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAA 65
Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758
|||||||||||| || || || ||
Sbjct 64 CATTCAAAAGGAATCCACATTACA 41
>seq78339
Length=2434
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/232 (68%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||| ||||| || ||||| | || || ||||||||||| | ||| || ||
Sbjct 1278 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 1337
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||| ||| ||| | |||||| || ||| || || |||||| | || |||
Sbjct 1338 TCCGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 1397
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || | | |||| ||| || || || |||| |||| | || | | ||||||
Sbjct 1398 CAACAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTAC 1457
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||||||||||| || ||||| | ||| |||| ||| | | || || ||||
Sbjct 1458 AACATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTCCGTGGTGGAA 1509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395803595857264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |