Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq14063 253 2e-62 seq19446 172 4e-38 seq26980 98.7 8e-16 seq26979 96.9 3e-15 seq422991 93.3 3e-14 seq78339 86.0 5e-12 >seq14063 Length=7913 Score = 253 bits (280), Expect = 2e-62 Identities = 373/526 (71%), Gaps = 34/526 (6%) Strand=Plus/Plus Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627 || || |||| ||| ||||||||||||| ||||| |||||||||||||| ||||| || Sbjct 6654 AATGGCTTCTATTACCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 6713 Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687 |||||| |||| ||| ||||| || || ||||| ||| |||||||||| ||| Sbjct 6714 ATTATGAAATGGGTTCCGGGTGACGATCCCGCGAAGGATCACCAGCGGTGGGCGCCCCAG 6773 Query 103688 TGTCCGTTCCTGaaaaaaaCGGCTGCTGGCGCGCTGC---------CCGCCGG---CCTT 103735 || || |||||| |||| || |||| || | |||| | || | Sbjct 6774 TGCCCCTTCCTG-------CGGCGGCAGGCGGACTCCGGCAACGTGCCGCGTGAGTCCGT 6826 Query 103736 GCG-------ATG---GACGGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCGTCCACCAA 103785 || | | | ||| || || |||||||| ||| |||||| ||| | || Sbjct 6827 GCCCGCGCCCACGCCCGCCGGCCACGATGAGTGCGGGGTGCGCGCGC--CCG--CGCCCG 6882 Query 103786 CGCCTGCGTGC-GCATGCCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGT 103844 ||||||| | ||||||||||||||| |||| | || | |||||||||||| | | Sbjct 6883 CGCCTGCCCCCCGCATGCCCGGCCCCGTGCACGCGCGCTACGCCTCCGAGGCGGCCCGCC 6942 Query 103845 TACAAACTTTTAAGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAG 103904 | | | || | || ||||| || ||| ||||||||||||| ||| | | ||||||| Sbjct 6943 TGCGCTCCTTCAGCGACTGGCCACGCAGTATGAAACAGAAACCCGAGGAACTCGCCGAAG 7002 Query 103905 CCGGATTCTACTACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTC 103964 | ||||||| ||||||||||| | ||||| || || ||||||||||| ||||| || | Sbjct 7003 CGGGATTCTTTTACACCGGCCAGGGTGACAAAACAAAGTGCTTCTACTGTGACGGCGGCC 7062 Query 103965 TAAAGGATTGGGAGCACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTT 104024 | ||||| |||||| | || || | ||||||| | || ||||||| | || ||| | Sbjct 7063 TCAAGGACTGGGAGAATGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGT 7122 Query 104025 GCGCATACGTGCTACTTGTCAAGGGCCACGATTATGTACAAAAGGT 104070 |||| ||||||| ||| |||||||| | || || || || ||||| Sbjct 7123 GCGCTTACGTGCAACTGGTCAAGGGTCGAGAGTACGTCCAGAAGGT 7168 >seq19446 Length=4212 Score = 172 bits (190), Expect = 4e-38 Identities = 337/496 (68%), Gaps = 14/496 (3%) Strand=Plus/Plus Query 29072 TGCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGTGCCGCT 29131 ||| || || |||||||||||||| ||| | || || || || || | || | Sbjct 1654 TGCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGATCGCATACCTAT 1713 Query 29132 GCCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGGCTCAA 29191 || || || | ||| || | ||||| || || || ||||||||||| ||||| |||| Sbjct 1714 ACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 1773 Query 29192 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAGGGCCG 29251 ||| | | ||| ||| ||||||||| | || ||||| || || |||| ||||| Sbjct 1774 TGACAGCTTAAAAGAGATTGAAGGCAGTTTTCAAGCACTGCAGCGGTCCTGCAGCGGCCG 1833 Query 29252 TTCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAAAAGGG 29311 | || ||||||||| | || |||||||| ||||| || |||||||||| ||||| || Sbjct 1834 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1893 Query 29312 CGTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGC----GGCCA 29367 ||||| | |||||||||||||||||||| ||||| || || ||||| | || Sbjct 1894 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCATTAAAACA 1953 Query 29368 AGCTGGCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGACC 29427 |||| || || | | || ||||| || || || || || ||||| | | || | Sbjct 1954 AGCTCGC----CCTGAATTAAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATC 2009 Query 29428 C---GTTCTATTTCATGCACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAG 29484 | |||| ||| | || | | | | | || |||||| | || || | | Sbjct 2010 CTTTCTTCTTTTTTGTTGACAAATCTAAGAGAACACG---ATTTGTGCAGTCAGTAAAGG 2066 Query 29485 AATTTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTG 29544 | || || | ||||| || || || || || || || || |||||||| || |||| Sbjct 2067 AGTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTG 2126 Query 29545 GCAAAGGCGCCAACCC 29560 ||||||| || ||||| Sbjct 2127 GCAAAGGTGCTAACCC 2142 >seq26980 Length=2195 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 107540 TTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGT 107599 |||| | || || | ||||||||||| || ||||| ||||| || |||||||| || | Sbjct 942 TTATTACAGATTCATCATGCAAATTTTCGTAAAAACCTTAACTGGGAAAACCATCACATT 1001 Query 107600 CGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGG 107659 ||| || ||| ||||| ||| | || || ||||||| || || ||||| Sbjct 1002 GGAAGTAGAAGCTTCTGATACAATCGAGAACGTGAAGGCAAAGATTCAAGACAAGGAAGG 1061 Query 107660 CGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAAC 107719 | | || ||||| |||||||| |||| || || || || ||||| || | || Sbjct 1062 CATTCCTCCAGATCAACAGAGACTAATTTTCGCCGGAAAGCAACTGGAAGATGGGCGGAC 1121 Query 107720 AATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 | | ||||||| || || || ||||| ||||| |||||| | ||| || Sbjct 1122 ACTATCGGACTATAATATCCAGAAGGAATCTACTTTGCACTTAGTGCTG 1170 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||||||||| || || || | || ||||| || || || | ||| ||| || Sbjct 1185 AATGCAAATTTTCGTGAAGACACTGACTGGCAAGACTATCACTCTAGAAGTTGAGCCTTC 1244 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || ||| || ||| |||||||| || | ||| ||||| Sbjct 1245 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 1304 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730 ||| |||||||||| ||| || || ||||| || |||||| ||| | | |||| Sbjct 1305 GCAAAGACTTATTTTTGCAGGAAAGCAGCTTGAAGATGGACGC----ACACTATCTGACT 1360 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||| ||||| ||||||||||| || ||| |||| | || || |||| |||| Sbjct 1361 ACAATATTCAGAAGGAGTCTACTTTACACTTGGTACTACGACTGAGAGGTGGAA 1414 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| || || |||| |||||||| || || | ||| ||| || Sbjct 1641 AATGCAAATTTTTGTAAAGACACTAACTGGCAAAACTATCACACTGGAAGTTGAGCCTTC 1700 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || ||| |||||| ||||| || || | ||| ||||| Sbjct 1701 TGATACAATTGAAAATGTTAAAGCGAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCA 1760 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730 ||| |||||||||| ||| || || || || || |||||| ||| || | |||| Sbjct 1761 GCAAAGACTTATTTTTGCTGGAAAGCAACTTGAAGATGGACGC----ACACTGTCAGACT 1816 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||| ||||| || || ||||| || || |||| || | || |||| |||| Sbjct 1817 ACAATATTCAGAAAGAATCTACCTTACATTTGGTACTGCGCCTGAGAGGTGGAA 1870 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| || || || || ||||||||||| || | ||| || ||| Sbjct 1413 AATGCAAATTTTTGTAAAGACATTGACTGGCAAAACCATCACATTGGAAGTAGAAGCTTC 1472 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || || ||| ||| || |||||||| | || || || Sbjct 1473 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATCCCTCCTGACCA 1532 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| || |||| ||| || ||||||||||| || | ||| || | || || || Sbjct 1533 ACAGAGGCTAATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 1592 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 ||||| ||||| || || |||||| | ||| || Sbjct 1593 TATTCAGAAGGAATCAACCTTGCACTTAGTGCTG 1626 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/208 (69%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| || || | || |||||||| ||||| | ||| ||| ||| Sbjct 1869 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACTATTACTTTAGAAGTGGAAGCTTC 1928 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || |||||| |||||||||||| | || ||||| Sbjct 1929 TGACACAATTGAAAATGTCAAGGCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGATCA 1988 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730 || || ||||||| ||| || ||||| || || |||||| ||| | | |||| Sbjct 1989 ACAAAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGC----ACACTCTCCGACT 2044 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCA 107758 | || || |||||||| ||||| || || Sbjct 2045 ATAATATACAAAAGGAATCTACTTTACA 2072 >seq26979 Length=899 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| ||||| | || ||||| || |||||| | ||| ||| || Sbjct 534 AATGCAAATTTTTGTTAAAACACTTACTGGCAAGACTATTACCCTTGAAGTTGAGCCTTC 593 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || ||| ||| ||| ||||| || || | ||| || || Sbjct 594 TGACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCA 653 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730 ||||| ||||||| ||| || ||||| || || |||||| || || | |||| Sbjct 654 ACAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGACGC----ACTTTGTCAGACT 709 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||| |||||||| || ||||| |||||| |||| Sbjct 710 ACAATATTCAAAAAGAATCTACCTTGCACTTGGT 743 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| ||||| | || || ||||| ||||| | ||| ||| ||| Sbjct 79 ATGCAAATTTTTGTAAAAACACTGACTGGAAAAACGATTACTTTAGAAGTGGAAGCTTCT 138 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || ||||||| || || |||||| | || ||||| Sbjct 139 GATACAATTGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 198 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731 || ||||| |||| || || || || ||||| |||||| ||| || | || || Sbjct 199 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGACGC----ACACTGTCAGATTA 254 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || || |||||||| ||||| |||||| | |||||| Sbjct 255 TAATATCCAAAAGGAATCTACTTTGCACTTAGTGTTG 291 Score = 87.8 bits (96), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| ||||| | ||||||||||| || || | ||| ||| ||| Sbjct 306 AATGCAAATTTTTGTTAAAACACTGACAGGCAAAACAATCACATTAGAAGTGGAAGCTTC 365 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || || ||| ||| ||||| ||||| | || ||||| Sbjct 366 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGATAAGGAAGGTATTCCTCCAGATCA 425 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730 || || || |||| || || |||||||| || |||||| || || | |||| Sbjct 426 ACAAAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGC----ACTCTGTCTGACT 481 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCAC 107759 | || ||||||||||| ||||| ||||| Sbjct 482 ATAATATTCAAAAGGAATCTACACTGCAC 510 >seq422991 Length=614 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||||||||| ||||| || | || || |||||||||||| | || ||| || Sbjct 244 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAAGCCTC 185 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | |||||| ||||| ||||| ||||| | || || || Sbjct 184 TGATACTATAGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACCA 125 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| || | || | ||| ||||||||||| || || | ||| || | |||||||| Sbjct 124 GCAACGATTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAA 65 Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758 |||||||||||| || || || || Sbjct 64 CATTCAAAAGGAATCCACATTACA 41 >seq78339 Length=2434 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| ||||| || ||||| | || || ||||||||||| | ||| || || Sbjct 1278 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 1337 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| ||| ||| | |||||| || ||| || || |||||| | || ||| Sbjct 1338 TCCGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 1397 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || | | |||| ||| || || || |||| |||| | || | | |||||| Sbjct 1398 CAACAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTAC 1457 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||||||||| || ||||| | ||| |||| ||| | | || || |||| Sbjct 1458 AACATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTCCGTGGTGGAA 1509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395803595857264