Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq78340 154 2e-32 seq78339 141 1e-28 seq26981 141 1e-28 seq26979 138 2e-27 seq78338 132 8e-26 seq26980 132 8e-26 seq422991 102 1e-16 >seq78340 Length=230 Score = 154 bits (170), Expect = 2e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || |||||||||||||| | || || ||| | Sbjct 8 TGCAAATCTTTGTTAAAACACTTACTGGAAAAACAATTACATTAGAAGTTGAAGCCTCTG 67 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||||||||| |||||| ||| ||||||||||||||| || ||||||| Sbjct 68 ACACAATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCAGATCAAC 127 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || ||||| ||||| || ||||| || ||| | | || | | || || |||| Sbjct 128 AACGTCTTATTTTCGCAGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAATA 187 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGG 146254 | ||||||||||| ||| | ||||||||| | || |||||||| Sbjct 188 TTCAAAAAGAATCTACTTTACATTTAGTACTTCGTTTAAGAGG 230 >seq78339 Length=2434 Score = 141 bits (156), Expect = 1e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || |||||||| ||||| | || || ||| | Sbjct 1738 TGCAAATCTTTGTTAAAACACTCACTGGAAAAACTATTACGTTAGAAGTTGAAGCCTCTG 1797 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||||||||| |||||| ||| |||||||||||||| || ||||||| Sbjct 1798 ACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAAC 1857 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || ||||| || || || ||||| || ||| | | || | | || || |||| Sbjct 1858 AACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAATA 1917 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | |||||||||||||| | ||||| ||| | || | |||||||||| ||||||| Sbjct 1918 TTCAAAAAGAATCGACACTTCATTTGGTACTGCGTCTGAGAGGAGGTATGCAAATATT 1975 Score = 120 bits (132), Expect = 5e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | |||||| | || || ||||| |||||| | || || |||| | || Sbjct 1282 TGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCG 1341 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||||||| ||||| ||| || ||||||||||| || ||||||| Sbjct 1342 ACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 1401 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || || ||||| || || | || | | || || || | Sbjct 1402 AACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTACAACA 1461 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || || ||||| || Sbjct 1462 TTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 1495 Score = 116 bits (128), Expect = 6e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | || |||||||| || || | || ||||| | | | Sbjct 1510 TGCAGATCTTTGTTAAGACTCTTACTGGAAAAACCATCACGTTAGAAGTAGAGCCTTCTG 1569 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| || || || || ||| |||||||| ||||| || || |||| Sbjct 1570 ACACAATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCAAC 1629 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || || ||||| || ||| | || ||| | |||||||||| Sbjct 1630 AGAGGCTCATTTTTGCTGGAAAGCAATTGGAAGATGGCCGTACATTATCTGATTATAATA 1689 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| ||| | ||||||||||| || Sbjct 1690 TTCAAAAGGAATCTACTCTACATTTAGTATTGCG 1723 >seq26981 Length=233 Score = 141 bits (156), Expect = 1e-28 Identities = 165/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || |||||||||||||| | || || ||| | Sbjct 11 TGCAAATCTTTGTCAAAACACTTACTGGAAAAACAATTACATTAGAAGTTGAAGCCTCTG 70 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||||||||| |||||| ||| |||||||||||||| || ||||||| Sbjct 71 ACACAATTGAAAATGTAAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAAC 130 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || ||||| || || || ||||| || ||| | || | | || || |||| Sbjct 131 AACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGACGTACACTTTCTGACTACAATA 190 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGG 146254 | ||||||||||| ||| | ||||||||| | || |||||||| Sbjct 191 TTCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGG 233 >seq26979 Length=899 Score = 138 bits (152), Expect = 2e-27 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||||||| | || |||||||| |||||| | || || ||| | | Sbjct 80 TGCAAATTTTTGTAAAAACACTGACTGGAAAAACGATTACTTTAGAAGTGGAAGCTTCTG 139 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| || || || ||| || ||||||||||| || ||||||| Sbjct 140 ATACAATTGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 199 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || | |||||||||||| Sbjct 200 AAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGACGCACACTGTCAGATTATAATA 259 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| ||| | || ||||| || || |||| || || Sbjct 260 TCCAAAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGG 305 Score = 114 bits (126), Expect = 2e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || || || || ||||| |||| || || | | | Sbjct 536 TGCAAATTTTTGTTAAAACACTTACTGGCAAGACTATTACCCTTGAAGTTGAGCCTTCTG 595 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||||| ||| ||| || || ||||| || || |||| Sbjct 596 ACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAAC 655 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||| | || ||| | || || |||| || |||| Sbjct 656 AGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGACGCACTTTGTCAGACTACAATA 715 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || | || || ||| | || ||||||| || Sbjct 716 TTCAAAAAGAATCTACCTTGCACTTGGTACTGCGGCTAAGAGGTGG 761 Score = 105 bits (116), Expect = 1e-17 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | ||||| |||||||| || | || || ||| | | Sbjct 308 TGCAAATTTTTGTTAAAACACTGACAGGCAAAACAATCACATTAGAAGTGGAAGCTTCTG 367 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || ||||| || ||| ||||| ||||| || ||||||| Sbjct 368 ATACAATAGAAAATGTTAAGGCAAAAATTCAGGATAAGGAAGGTATTCCTCCAGATCAAC 427 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || ||||| || || ||||| |||| ||| | || | | || ||||||| Sbjct 428 AAAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAATA 487 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| || | || ||||| | || |||| || || Sbjct 488 TTCAAAAGGAATCTACACTGCACTTAGTCCTGCGTCTAAGGGGTGG 533 >seq78338 Length=1389 Score = 132 bits (146), Expect = 8e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| |||| ||||| || ||||| | || || || | | Sbjct 29 TGCAGATTTTTGTTAAAACCCTAACTGGAAAGACTATTACCCTGGAAGTGGAGCCCTCTG 88 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| |||||| ||| ||||||||||| ||||| ||||||| Sbjct 89 ACACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATCCCACCTGATCAAC 148 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || ||||| || || || ||||| || ||| | | || | | || || |||| Sbjct 149 AACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAATA 208 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||||||||| || | ||||| ||| | || | ||||||||| ||||||| Sbjct 209 TTCAAAAAGAATCCACACTTCATTTGGTACTGCGTCTGCGAGGAGGTATGCAAATATT 266 Score = 118 bits (130), Expect = 2e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || ||||||| || || ||||| | || ||||||| | Sbjct 257 TGCAAATATTTGTCAAGACCCTAACAGGCAAGACCATTACCCTGGAAGTAGAACCATCTG 316 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || ||| ||||| ||| || ||||| || || || |||| Sbjct 317 ACACAATTGAGAATGTGAAGGCTAAGATACAGGATAAGGAGGGCATCCCCCCAGACCAAC 376 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| ||||| ||||| || ||| | | || || | ||||| |||| Sbjct 377 AGCGTCTCATTTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATA 436 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | |||||||| |||||| | || ||||| Sbjct 437 TTCAAAAAGAGTCGACTCTGCACTTAGT 464 >seq26980 Length=2195 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||| | || || ||||| |||||| | || || ||| | | Sbjct 1871 TGCAAATTTTTGTGAAGACACTTACTGGCAAAACTATTACTTTAGAAGTGGAAGCTTCTG 1930 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || || ||||||||||||||| || ||||||| Sbjct 1931 ACACAATTGAAAATGTCAAGGCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGATCAAC 1990 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || ||||||||||| |||||| | || ||| | || | | || ||||||| Sbjct 1991 AAAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTCTCCGACTATAATA 2050 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 ||||||| ||||| ||| | ||||||||| | || | ||||| || Sbjct 2051 TACAAAAGGAATCTACTTTACATTTAGTACTGCGTCTGAGAGGTGG 2096 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || ||| | || || || || || ||| | || || || | | | Sbjct 1187 TGCAAATTTTCGTGAAGACACTGACTGGCAAGACTATCACTCTAGAAGTTGAGCCTTCTG 1246 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| || |||||| || ||||| || ||||| | Sbjct 1247 ATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAGC 1306 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||||||||| || || | || ||| | || || | || || |||| Sbjct 1307 AAAGACTTATTTTTGCAGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAATA 1366 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || ||| | || || ||| ||||| | ||||| || Sbjct 1367 TTCAGAAGGAGTCTACTTTACACTTGGTACTACGACTGAGAGGTGG 1412 Score = 105 bits (116), Expect = 1e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| ||||| || ||||| || || | || |||||| | | Sbjct 959 TGCAAATTTTCGTAAAAACCTTAACTGGGAAAACCATCACATTGGAAGTAGAAGCTTCTG 1018 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || || || ||| || ||||||||||| || ||||||| Sbjct 1019 ATACAATCGAGAACGTGAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 1078 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| ||||| || || || ||| | || ||| | || || | || ||||||| Sbjct 1079 AGAGACTAATTTTCGCCGGAAAGCAACTGGAAGATGGGCGGACACTATCGGACTATAATA 1138 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || || ||||| ||| | || ||||| Sbjct 1139 TCCAGAAGGAATCTACTTTGCACTTAGT 1166 Score = 105 bits (116), Expect = 1e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| ||||| || || ||||| || || | || |||||| | | Sbjct 1415 TGCAAATTTTTGTAAAGACATTGACTGGCAAAACCATCACATTGGAAGTAGAAGCTTCTG 1474 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || ||||| ||| |||||||| || || || || |||| Sbjct 1475 ATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATCCCTCCTGACCAAC 1534 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || ||||||||||| ||||| | || ||| | || | |||||||||||| Sbjct 1535 AGAGGCTAATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAATA 1594 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || || ||||| || | || ||||| Sbjct 1595 TTCAGAAGGAATCAACCTTGCACTTAGT 1622 >seq422991 Length=614 Score = 102 bits (112), Expect = 1e-16 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| ||||| |||| || ||| | Sbjct 242 TGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAAGCCTCTG 183 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||||||| ||| || ||| ||| ||||| |||||||| || || | Sbjct 182 ATACTATAGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACCAGC 123 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | || ||||| |||||||| |||| ||| | || || | || || || | Sbjct 122 AACGATTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTACAACA 63 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAA 146260 | ||||| ||||| || | ||| | || | || | | |||||||| Sbjct 62 TTCAAAAGGAATCCACATTACATCTTGTGCTTCGGCTTCGCGGAGGTAA 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779953955873920