Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq766 89.7 6e-13 seq8549 82.4 1e-10 >seq766 Length=9911 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/169 (74%), Gaps = 10/169 (6%) Strand=Plus/Minus Query 192952 ATTATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGA 193009 |||||||||| || || || || || ||| ||| | || || ||||| | ||||| || Sbjct 3466 ATTATCCACATAAGCCTCTGGTCACAACAAGATCTATGGAATATTTACGAT-TTAGA-GA 3409 Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069 | || |||||| ||| |||||||||| || || || ||||| || |||||||| Sbjct 3408 GTTGCCTGCTGGTATCAATTCTATTGTTGCAATTTTATGTTACACTGGATACAATCAAGA 3349 Query 193070 AGACAGTATTATTTTAAATAAAGCTTC---TATTGAAAGAGGATTATTT 193115 ||| ||| | ||||||||| ||||| | ||||||||||||| ||| Sbjct 3348 AGATAGTGTCATTTTAAAT---GCTTCAGCTGTTGAAAGAGGATTCTTT 3303 >seq8549 Length=4112 Score = 82.4 bits (90), Expect = 1e-10 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 51957 ACATTTAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 52016 |||||| ||||||||| | ||| |||| ||||| |||||||| || |||||| Sbjct 1097 ACATTTCGTATGAATTTGAGTTGCACTTCGCCATACAATGCCGATTTTGACGGTGATGAA 1156 Query 52017 ATGAATTTACATGTTCCTCAATCATATGG-AGCTACTGCTGAATTACAA 52064 |||||||||||||| ||||||||| |||| | || ||||||| || || Sbjct 1157 ATGAATTTACATGTACCTCAATCA-ATGGAAACTCGTGCTGAAGTAGAA 1204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 630158299569280