Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq26979 91.5 3e-13 seq343850 87.8 3e-12 seq614033 84.2 4e-11 >seq26979 Length=899 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 11/140 (8%) Strand=Plus/Minus Query 81643 CAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTC--------TACAGTC---T 81691 || |||| ||||||| || ||||||||||| || || || | | |||| | Sbjct 279 CAAAGTAGATTCCTTTTGGATATTATAATCTGACAGTGTGCGTCCATCTTCCAGTTGCTT 220 Query 81692 TCTAACAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGC 81751 || | | || || |||||||||||| ||||| | || ||||||| |||||||||||||| Sbjct 219 TCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGC 160 Query 81752 TTTTATATTTTCAATCGTAT 81771 || | ||||||||| |||| Sbjct 159 CTTAACATTTTCAATTGTAT 140 >seq343850 Length=927 Score = 87.8 bits (96), Expect = 3e-12 Identities = 106/143 (74%), Gaps = 6/143 (4%) Strand=Plus/Minus Query 182419 CAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAATACGGT 182478 |||||||| ||||||||| | || || ||||||| || ||||| ||| | ||||| Sbjct 578 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCATCTGATAAACAGGAATATTCA 519 Query 182479 GCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAATTTCCT 182538 |||||||| ||||||| || || | ||||||| | ||||| | |||||||||||| Sbjct 518 GCAAGAACAATAAGAAATAAAATCAATTCTAAGTTAGACGAATACCTCACAGAATTTCCT 459 Query 182539 ---GTTATACGTAAACACCCATA 182558 ||||| |||||| || || Sbjct 458 CCAGTTAT---TAAACATCCTTA 439 >seq614033 Length=636 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 182419 CAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAATACGGT 182478 |||||||| ||||||||| | || || ||||||| || ||||| ||| | ||||| Sbjct 315 CAGGTAGATGCTCACAATGTGGTTCCATGTTGGGTGGCATCTGATAAACAGGAATATTCA 256 Query 182479 GCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAATTTCC 182537 |||||||| ||||||| || || | ||||||| |||| || | ||||||||||| Sbjct 255 GCAAGAACAATAAGAAATAAAATCAATTCTAAGTTAGATGAGTACCTCACAGAATTTCC 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896272264015360