Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq78339 138 7e-28 seq78338 111 1e-19 seq26981 104 2e-17 seq26980 102 5e-17 seq26979 102 5e-17 >seq78339 Length=2434 Score = 138 bits (152), Expect = 7e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || ||||| || ||||| |||||||| |||||||| ||||| Sbjct 1507 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 1448 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||||||| ||||| |||||||||||||| || |||||| | || Sbjct 1447 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 1388 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||||||| | || |||| || | |||||| | ||| || Sbjct 1387 ATGCCTTCCTTGTCTTGAATTTTC-GCTTTTACATTTTCGATAGTGTCGGAAGGTTCAAC 1329 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || |||||||| || | ||||| || || |||||||| Sbjct 1328 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 1281 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||| ||| | |||||||| || || |||||||| || ||||| || || Sbjct 1964 ACCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATTGTAGTCAGA 1905 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||||||| || || || ||||| | ||| || |||||| | || Sbjct 1904 CAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGG 1845 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| | | |||| || | ||||| | ||| | Sbjct 1844 AATGCCTTCTTTGTCTTGGATTTT-AGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAA 1786 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||| || ||||| || || | ||||| |||||||| |||||| Sbjct 1785 CTTCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 1736 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || || ||||||||||| || ||||| || || ||||| || | ||| || | Sbjct 1724 ACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCC 1665 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||||||| ||||| |||||||| | | ||| || ||| | || | ||||||||| Sbjct 1664 ATCTTCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTT 1605 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || || | || | || | ||||| | || || || | ||||| Sbjct 1604 GTCTTGGATCTT-TGCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTACTTCTAACGTGA 1546 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || || | || || |||||||||||||| Sbjct 1545 TGGTTTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 1509 >seq78338 Length=1389 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| || |||||| ||||| || | |||| |||||| || || ||||| || || Sbjct 939 ACCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 880 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| || || || || ||||| | || || || ||| | || Sbjct 879 GAGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGG 820 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||| |||||||| || || || || ||||| ||| ||||| | ||| | Sbjct 819 AATACCCTCTTTGTCTTGGATCTT-TGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAA 761 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| ||||| | || |||||||||||||||||| Sbjct 760 CTTCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCATA 711 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| || ||| | |||||||| || ||| |||||||| || ||||| || || Sbjct 255 ACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGA 196 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||||||| || || || ||||| | ||| || ||||| | || Sbjct 195 CAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGG 136 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||||| | || |||| || | ||||| | |||| Sbjct 135 GATGCCTTCTTTGTCTTGGATTTT-AGCTTTTACATTTTCAATAGTGTCAGAGGGCTCCA 77 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || |||| ||||| ||||| ||||||||| Sbjct 76 CTTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 27 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | || ||||| | ||| |||||||| |||||||| || || Sbjct 1166 CCACCACGAAGACGAAGAACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGAC 1107 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||| ||||| || ||||| || | |||||| || ||| | || Sbjct 1106 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 1047 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || ||||| || | ||||||| || ||||| Sbjct 1046 ATGCCCTCCTTGTCTTGGATCTTAGCCTT-AACATTTTCGATGGTGTCGGATGGCTCCAC 988 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || ||||||||||||||| Sbjct 987 TTCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACAAAGATCTGCATA 939 >seq26981 Length=233 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 33526 CCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGT 33585 ||||| ||||| | || ||||| | ||| |||||||| || ||||| || || ||| Sbjct 233 CCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGT 174 Query 33586 GTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACA 33645 || ||| | || |||||||| || || || ||||| | ||| || |||||| | || | Sbjct 173 GTACGTCCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATG 114 Query 33646 CCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTC 33704 ||||||||||| |||||| | | |||| || | ||||| | ||| || || Sbjct 113 CCTTCTTTGTCTTGAATTTT-AGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTC 55 Query 33705 AACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || ||||| || || | ||||| |||||||| |||||| Sbjct 54 TAATGTAATTGTTTTTCCAGTAAGTGTTTTGACAAAGATTTGCATA 9 >seq26980 Length=2195 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | || ||||||| ||| || |||||||| || || |||||| Sbjct 2096 CCACCTCTCAGACGCAGTACTAAATGTAAAGTAGATTCCTTTTGTATATTATAGTCGGAG 2037 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||||||| | || || | ||||||||| |||||||| | | || |||||| | || Sbjct 2036 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGATCTGGAGGA 1977 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || ||| || | | |||| || | ||||| | |||||| Sbjct 1976 ATGCCTTCTTTATCCTGAATCTT-GGCCTTGACATTTTCAATTGTGTCAGAAGCTTCCAC 1918 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || ||||| || || | || || ||||| || ||||| Sbjct 1917 TTCTAAAGTAATAGTTTTGCCAGTAAGTGTCTTCACAAAAATTTGCAT 1870 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || || ||||| || ||||| ||| | || |||| |||||||| |||||| Sbjct 1604 TCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAA 1545 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | | ||| || || | || | |||||||||||| |||||| || | ||||| Sbjct 1544 ATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGAATTTT-TGCCTTAACATT 1486 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | || || | ||| || || | ||||| ||||| || || || || ||||| Sbjct 1485 TTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTGCCAGTCAATGTCTTTAC 1426 Query 33738 AAAGATCTGCAT 33749 ||| || ||||| Sbjct 1425 AAAAATTTGCAT 1414 >seq26979 Length=899 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| ||||| || || | ||| || ||||| || || ||||| || Sbjct 305 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATAATCTGAC 246 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||||||| | || |||| ||| ||||| || ||||||| | || |||||| | || Sbjct 245 AGTGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGA 186 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||| || || | ||||| ||| || || | |||||| Sbjct 185 ATGCCTTCCTTGTCTTGAATCTT-TGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 127 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || |||||||| || || | ||||||||||| || ||||| Sbjct 126 TTCTAAAGTAATCGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 326171452369920