Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq14063 147 2e-30 seq78338 134 1e-26 seq26979 116 3e-21 seq78339 107 2e-18 seq78340 105 5e-18 seq26981 100 2e-16 seq26980 100 2e-16 >seq14063 Length=7913 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 99911 GATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTAC 99970 || ||||| | |||| ||||||| ||||| ||| || | |||||||| || || | |||| Sbjct 6957 GACTGGCCACGCAGTATGAAACAGAAACCCGAGGAACTCGCCGAAGCGGGATTCTTTTAC 7016 Query 99971 ACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAA 100030 |||||| | ||||||||| || || || | || |||||||||||||| |||||||| Sbjct 7017 ACCGGCCAGGGTGACAAAACAAAGTGCTTCTACTGTGACGGCGGCCTCAAGGACTGGGAG 7076 Query 100031 AGCACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGG 100090 | ||||| ||||||| | | ||||| || ||||| || || ||| | ||||||| Sbjct 7077 AATGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCTTACGTGCAA 7136 Query 100091 CTTGTAAAGGGTTACGACTACGTGCAGCGCGTGCTTAGCGAAGCGTGCG 100139 || || |||||| || ||||| ||| ||| | | || ||||||| Sbjct 7137 CTGGTCAAGGGTCGAGAGTACGTCCAGAAGGTGATCACGGAGGCGTGCG 7185 >seq78338 Length=1389 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||||||||| | ||||| ||||| |||||| ||||| || ||| Sbjct 28 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACTATTACCCTGGAAGTGGAGCCCTCT 87 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | || ||| ||||| |||||||||||| | || ||||||| Sbjct 88 GACACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATCCCACCTGATCAA 147 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| |||||||| ||||| |||||| | || || || ||||| Sbjct 148 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAT 207 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| ||||| ||||| ||| || | | |||||||| Sbjct 208 ATTCAAAAAGAATCCACACTTCATTTGGTACTGCGTCTGCGAGGAGG 254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || | || ||||||||||||||| ||||| |||||| Sbjct 256 ATGCAAATATTTGTCAAGACCCTAACAGGCAAGACCATTACCCTGGAAGTAGAACCATCT 315 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | ||||| || || || || || ||| | ||| || ||| Sbjct 316 GACACAATTGAGAATGTGAAGGCTAAGATACAGGATAAGGAGGGCATCCCCCCAGACCAA 375 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| ||| || || ||||| |||||| | ||| || |||||||| Sbjct 376 CAGCGTCTCATTTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 435 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || |||||||| || || || || ||||| Sbjct 436 ATTCAAAAAGAGTCGACTCTGCACTTAGT 464 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| |||||| | |||||||| || || ||| ||||| || || Sbjct 483 AATGCAAATATTTGTCAAAACACTTACTGGCAAAACAATAACCTTGGAAGTTGAGCCATC 542 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || ||| | || ||| || ||| ||||||||||| | || ||||| Sbjct 543 TGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATTCCTCCAGATCA 602 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||| | || || | ||| ||||| || | |||||| ||| || || ||||| Sbjct 603 ACAACGTCTCATCTTTGCAGGCAAGCAGCTTGAAGATGGCCGCACTCTGTCTGACTACAA 662 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| || || || || || ||| | | | |||||||| Sbjct 663 TATCCAGAAAGAGTCCACCCTGCACTTGGTACTCCGTCTCCGAGGAGG 710 >seq26979 Length=899 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||||||||||||| | ||||||||||| |||||| | ||| || || Sbjct 534 AATGCAAATTTTTGTTAAAACACTTACTGGCAAGACTATTACCCTTGAAGTTGAGCCTTC 593 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | || ||| ||||||| || || || || | ||| || || Sbjct 594 TGACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCA 653 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| |||||||||| ||| || |||||| | |||||| ||| || || ||||| Sbjct 654 ACAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGACGCACTTTGTCAGACTACAA 713 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || |||||||||||||| | || || ||| || || || |||| ||| Sbjct 714 TATTCAAAAAGAATCTACCTTGCACTTGGTACTGCGGCTAAGAGGTGGA 762 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||||||||||||| |||| ||||| || || || | ||| ||| | Sbjct 306 AATGCAAATTTTTGTTAAAACACTGACAGGCAAAACAATCACATTAGAAGTGGAAGCTTC 365 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| || || ||||| | || ||||| Sbjct 366 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGATAAGGAAGGTATTCCTCCAGATCA 425 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||||||||| |||| || |||||||| |||||||| ||| || || || || Sbjct 426 ACAAAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 485 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| ||||||||||| || ||||| Sbjct 486 TATTCAAAAGGAATCTACACTGCACTTAGT 515 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| |||||| ||||||| || || ||||| | ||| ||| | Sbjct 79 ATGCAAATTTTTGTAAAAACACTGACTGGAAAAACGATTACTTTAGAAGTGGAAGCTTCT 138 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || ||| ||| ||||| |||||| | || |||||| Sbjct 139 GATACAATTGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 198 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| || |||| || || || ||| | |||||| || || ||||| || Sbjct 199 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGACGCACACTGTCAGATTATAAT 258 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||| |||||||| | || ||||| ||| Sbjct 259 ATCCAAAAGGAATCTACTTTGCACTTAGTGTTG 291 >seq78339 Length=2434 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||||||| | ||||| || || ||||| | ||| ||| || Sbjct 1737 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACTATTACGTTAGAAGTTGAAGCCTCT 1796 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||||| |||||||||||| | || |||||| Sbjct 1797 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 1856 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| |||||||| ||||| |||||| | || || || ||||| Sbjct 1857 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAT 1916 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| ||||| ||||| ||| || | | ||||||| Sbjct 1917 ATTCAAAAAGAATCGACACTTCATTTGGTACTGCGTCTGAGAGGAGG 1963 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||| ||||| || |||||| | || || || |||||||| ||||| ||||| Sbjct 1278 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 1337 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| || | | | || ||| |||||| ||||| |||||| | || ||| Sbjct 1338 TCCGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 1397 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||| | | |||| ||| || || ||||| ||||| ||| | ||| ||| Sbjct 1398 CAACAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCCGACTAC 1457 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||||| |||||||||||||| || || || |||||| Sbjct 1458 AACATTCAAAAAGAATCTACTCTTCACTTGGTATTG 1493 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || |||||||| || | ||||| || ||||| || | ||| ||| || Sbjct 1508 AATGCAGATCTTTGTTAAGACTCTTACTGGAAAAACCATCACGTTAGAAGTAGAGCCTTC 1567 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | ||||| ||| || ||||||||||| | ||| || || Sbjct 1568 TGACACAATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCA 1627 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGATTAC 106436 ||| ||||| |||| ||| || || ||||| |||||| | | | ||| | |||| Sbjct 1628 ACAGAGGCTCATTTTTGCTGGAAAGCAATTGGAAGATGGCCGTACATTATCTG--ATTAT 1685 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || ||||| |||||||| ||||||||||||||| Sbjct 1686 AATATTCAAAAGGAATCTACTCTACATTTAGTATTG 1721 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||||||||| || |||||||||||| ||||| |||||| Sbjct 2193 ATGCAAATATTTGTCAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 2252 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | ||||| || || || || || || | ||| ||| ||| Sbjct 2253 GACACAATTGAGAATGTGAAGGCTAAGATACAGGATAAGGAGGGTATCCCCCCTGACCAA 2312 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| ||||| ||| | |||||| ||| || || ||||| Sbjct 2313 CAACGTCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGCACTCTGTCTGACTACAAT 2372 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTA 106469 || || ||||| || || || || || ||| Sbjct 2373 ATCCAGAAAGAGTCCACCCTTCACTTGGTA 2402 >seq78340 Length=230 Score = 105 bits (116), Expect = 5e-18 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||||||| | ||||| || || ||||| | ||| ||| || Sbjct 7 ATGCAAATCTTTGTTAAAACACTTACTGGAAAAACAATTACATTAGAAGTTGAAGCCTCT 66 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || |||||| || ||||||||| | || |||||| Sbjct 67 GACACAATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCAGATCAA 126 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 ||| | ||||||| || ||||| ||||| |||||| || | ||| | | | |||| Sbjct 127 CAACGTCTTATTTTCGCAGGCAAGCAATTGGAAGATGGTCGTACACTTTCTG--ACTACA 184 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGG 106483 | || |||||||||||||| ||||||||||| | | ||| |||| Sbjct 185 ATATTCAAAAAGAATCTACTTTACATTTAGTACTTCGTTTAAGAGG 230 >seq26981 Length=233 Score = 100 bits (110), Expect = 2e-16 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| |||||| | ||||| || || ||||| | ||| ||| || Sbjct 10 ATGCAAATCTTTGTCAAAACACTTACTGGAAAAACAATTACATTAGAAGTTGAAGCCTCT 69 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || |||||| |||||||||||| | || |||||| Sbjct 70 GACACAATTGAAAATGTAAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 129 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 ||| | ||||||| |||||||| ||||| |||||| | | ||| | || |||| Sbjct 130 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGACGTACACTTT--CTGACTACA 187 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGG 106483 | || |||||||||||||| | ||||||||| | | ||| |||| Sbjct 188 ATATTCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGG 233 >seq26980 Length=2195 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || ||| | |||||||| || ||||| | ||| ||| | Sbjct 1869 AATGCAAATTTTTGTGAAGACACTTACTGGCAAAACTATTACTTTAGAAGTGGAAGCTTC 1928 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | || || || ||| || ||||||||| | || ||||| Sbjct 1929 TGACACAATTGAAAATGTCAAGGCCAAGATTCAGGATAAAGAAGGCATTCCTCCAGATCA 1988 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 |||||||||||||| ||| || |||||| | |||||| | | ||| | ||| || Sbjct 1989 ACAAAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTCT--CCGACTAT 2046 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || |||||||| |||||||| ||||||||||| || Sbjct 2047 AATATACAAAAGGAATCTACTTTACATTTAGTACTG 2082 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || |||||||||||||| ||||| || ||||| |||| | Sbjct 1413 AATGCAAATTTTTGTAAAGACATTGACTGGCAAAACCATCACATTGGAAGTAGAAGCTTC 1472 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| ||||||||||| | || ||| || Sbjct 1473 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATCCCTCCTGACCA 1532 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| ||||| |||| ||| || ||||| | |||||| || || ||||| || Sbjct 1533 ACAGAGGCTAATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 1592 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 || || || ||||| || | || ||||| Sbjct 1593 TATTCAGAAGGAATCAACCTTGCACTTAGT 1622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399229793259008