Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq78339 122 8e-23 seq78338 104 2e-17 seq422991 102 7e-17 >seq78339 Length=2434 Score = 122 bits (134), Expect = 8e-23 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | ||| ||||| || | ||| || |||||||||||||| |||| Sbjct 1509 TTCCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGG 1450 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || |||| |||| ||||| || ||||| ||||| || || || || | || Sbjct 1449 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAG 1390 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| || ||||||| | ||| ||| || || | | || | | |||||| | ||| Sbjct 1389 GAATGCCTTCCTTGT-CTTGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCA 1331 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || |||| || || ||||||||||| | |||||||| || ||||||||| || Sbjct 1330 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTG 1277 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | ||| || ||||||| ||| ||||||||||| || ||||| | Sbjct 1735 CCGCCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 1676 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || |||| ||||| || ||||| || | || ||| ||||| | ||| Sbjct 1675 AATGTACGGCCATCTTCCAATTGCTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGA 1616 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || ||||| ||||||| ||||| || | | ||||| | || || Sbjct 1615 ATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTACT 1556 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || | |||||| ||||| || || | ||| || ||||| |||||||||| Sbjct 1555 TCTAACGTGATGGTTTTTCCAGTAAGAGTCTTAACAAAGATCTGCATTC 1507 >seq78338 Length=1389 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||||||||| | | | || ||||| || ||| || ||||| |||||||| || Sbjct 1169 TTTCCACCACGAAGACGAAGAACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCC 1110 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || || || | || |||| ||| ||||| ||||| || | ||||| ||||| | Sbjct 1109 GACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGG 1050 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 |||| || ||||||||| |||||| ||| | | || | | |||||| | ||| Sbjct 1049 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATGGTGTCGGATGGCTCC 990 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| || || || || | || || ||||| |||||||| Sbjct 989 ACTTCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACAAAGATCTGCAT 940 >seq422991 Length=614 Score = 102 bits (112), Expect = 7e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 35505 TATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAAT 35564 |||| || || || | || | ||| | |||||| || ||||||||||||||||| | Sbjct 12 TATTACCTCCGCGAAGCCGAAGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGT 71 Query 35565 CGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCG 35624 | | ||| || || | || || ||||| ||||| ||||| ||||| || |||||||| | Sbjct 72 CAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTG 131 Query 35625 AAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATT 35684 |||| | ||||| || |||||| || | | || | | || || | || Sbjct 132 GTGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTT 191 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 ||||||| | || || ||||||||||| | || || || || || |||||| || Sbjct 192 CCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447231338814080