Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq227148 610 9e-170 seq242670 104 3e-17 seq36366 102 1e-16 seq187312 87.8 2e-12 seq352311 86.0 9e-12 >seq227148 Length=2115 Score = 610 bits (676), Expect = 9e-170 Identities = 1219/1789 (68%), Gaps = 23/1789 (1%) Strand=Plus/Minus Query 68356 ATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAG 68415 |||||| | ||||| | ||||||||||| | | ||| |||||||| |||| ||| Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAG 1777 Query 68416 TACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAA 68475 ||||| || ||||| | ||| | |||| ||| |||||| ||| |||||||| | Sbjct 1776 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCA 1717 Query 68476 TAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTA 68535 || | || | || | ||| || || | ||||| ||||| || || || ||||||||| Sbjct 1716 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTA 1657 Query 68536 TCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCT--TAAAAATCT 68593 || |||||||| | ||| | || | | ||| ||||| | || | || |||||| Sbjct 1656 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 1597 Query 68594 GTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTA 68650 || || || | |||| | | ||| ||| || |||||| | | | || || | Sbjct 1596 CTT--ATTTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAA 1539 Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710 ||| || || || |||| ||| || | | || ||| | | || || || | | Sbjct 1538 GATTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGT 1479 Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770 | |||| ||||||| |||||||| ||||| | ||||||||| ||| | |||| Sbjct 1478 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 1419 Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830 | | ||||||| | || || |||||||| ||||| || ||||| |||||||| || | || Sbjct 1418 CAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCA 1359 Query 68831 ATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAA 68890 | | | ||| | | ||| ||| || || || ||||| || ||| ||||||| Sbjct 1358 ACAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAA 1299 Query 68891 GATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATC 68950 | || | || | ||| | ||| || ||||| || || | ||||| | || Sbjct 1298 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGC-TGGACTC 1240 Query 68951 CATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009 | || |||||| || | ||||| | ||| |||| ||||||||| || ||||||||| Sbjct 1239 CCTTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCA 1180 Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069 || |||||||||||||| || || | | |||||||| | ||||| | ||| ||| | Sbjct 1179 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAA 1120 Query 69070 GGATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128 || || | | | | | ||| |||||||||| |||||||| |||||||| |||||||| Sbjct 1119 GG-TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 1061 Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188 |||||| |||||||| ||| ||||| || | ||||||| | |||| ||| || | ||| Sbjct 1060 GTGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTT 1001 Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCC 69248 || | |||| | ||| | || | || |||| || ||||| ||||| Sbjct 1000 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTT 941 Query 69249 ATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTAC--CTCATTA 69306 || | ||||||||| || ||||||| || || || ||||||||||| || || || Sbjct 940 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTC 881 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | || ||||| | | ||| || || ||||| |||||||| || || || |||||| Sbjct 880 TGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTT 823 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 | ||||||||||| ||||||| || ||||| || | || | || |||||||| || Sbjct 822 TTTTGATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCT 763 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTAC-GGTCTTGTAA-- 69483 | || | ||| ||||| || ||||| | || || | | | || || || ||| Sbjct 762 ACTTGGGCTTCTATAATTGACTTCCATA--ACTCTTG-AGCTCGGACTTGTTTTATAAAT 706 Query 69484 CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCC 69543 || | |||| |||||||| |||||||| ||||||||| ||||| || ||| | Sbjct 705 CGTGTTTCTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATAACAGTCAGCG 646 Query 69544 AATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTC 69603 | || ||||| |||| |||||||| | ||| || ||||||| | |||| |||| Sbjct 645 AGGCCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTC 586 Query 69604 ATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTT 69663 ||||| ||||| |||||||| | ||| ||| || ||||| | ||| ||||||| || Sbjct 585 ATAAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 526 Query 69664 CCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 69723 |||||||| || || | ||| | ||||| | || || | |||||| || |||| ||| Sbjct 525 CCTGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATAA 466 Query 69724 ATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTA 69783 || || | | || || ||||| ||||| || ||||||| ||||||||||| || ||| Sbjct 465 ATTGCAAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 406 Query 69784 TAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTT 69843 || ||||||| ||| || | | |||||| || ||||| || |||| || ||| Sbjct 405 TACACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAA 346 Query 69844 CCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGA 69903 || || | || | || || |||||| || || || |||||| |||| Sbjct 345 CCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAAT 286 Query 69904 GCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGA 69963 ||||| |||| || || ||| | ||||| || |||||||| ||| |||| | ||| Sbjct 285 GCACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGG 226 Query 69964 AAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGA 70023 || || || | || | || || | || || | |||||| |||||| Sbjct 225 AAGCAAGAGGAAAGCTGTGGCCGTGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCGTGT 166 Query 70024 GTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTG 70082 || || |||| || || | || ||| || || | || || || || || ||| | Sbjct 165 GTAAAATATTTCTCCGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCG 106 Query 70083 ATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131 ||||| ||||| | ||| | ||| | ||| || ||||||| ||| ||| Sbjct 105 -TGAATACCTATTGAGACTCTCATAAGCATGTGTTGAGGTCTTTCAACC 58 >seq242670 Length=698 Score = 104 bits (114), Expect = 3e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||||| | ||| ||||||| |||||| |||||| ||||||||| ||||||||||||||| Sbjct 391 TTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 450 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 ||| ||||| || |||| ||| |||| | || ||| ||||||| ||| Sbjct 451 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500 >seq36366 Length=4232 Score = 102 bits (112), Expect = 1e-16 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||| ||| ||| | ||| || || || | ||| ||||| |||||||| |||| Sbjct 2356 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCACGTTTTT 2415 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | | ||||||||| | |||||| || || || || || ||||| ||||| ||||| | Sbjct 2416 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAAAG 2475 Query 39759 CAACAAGTCTCTCTCCGTAACTTGTA-TCATTATGT--ATCCACTTCTGTGCCCAATCAG 39815 ||| || | ||||| | | | | || | || ||||||| |||||| || | Sbjct 2476 CAATAATACGTTCTCCAAATGTAGCAGTCTTGCTGCCGATCCACTGTAATGCCCAGTCTG 2535 Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855 | |||||||||||||| || | || || || |||||||| Sbjct 2536 CCTTCTTCTTTACACACGGTAGAGTCTCAATTGCATTAAA 2575 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || |||| ||||||||||| || ||||||||||| || || || ||||| ||||| | | Sbjct 3607 TTGGATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3666 Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATT 40209 ||||| || ||||||| ||||| || ||||| || | ||||||| Sbjct 3667 CATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTTGGATT 3713 >seq187312 Length=1851 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/129 (76%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 162494 TTATGACCCC--TATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATT 162551 ||||||| || ||||| |||||| |||| ||| | ||| | || ||| | | ||| | Sbjct 1037 TTATGACTCCAGTATTA--CCTATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1094 Query 162552 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGT 162611 ||||||| |||| ||| |||||| | || | ||||||||||| ||||| || ||||| Sbjct 1095 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATTAAATATGATGGAGAACGGGTTCAAGT 1154 Query 162612 TCATAAAAA 162620 |||||||| Sbjct 1155 GCATAAAAA 1163 >seq352311 Length=307 Score = 86.0 bits (94), Expect = 9e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 70345 ttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404 || || || || ||||||||||| ||||| || |||||||| || | ||| ||||| || Sbjct 278 TTCTTGGTGTCTTTGTGTAAATTGGATATTGCGATTCTGGCAGCCAAAATGGCATAATCG 219 Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTA 70444 ||||| | ||| || ||||||||| ||||| ||||||| Sbjct 218 GGATGATCTGTTGTCTTAGTAGCTGCAATTTCAGCAGCTA 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 681480709280640