Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq227148 610 9e-170
seq242670 104 3e-17
seq36366 102 1e-16
seq187312 87.8 2e-12
seq352311 86.0 9e-12
>seq227148
Length=2115
Score = 610 bits (676), Expect = 9e-170
Identities = 1219/1789 (68%), Gaps = 23/1789 (1%)
Strand=Plus/Minus
Query 68356 ATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAG 68415
|||||| | ||||| | ||||||||||| | | ||| |||||||| |||| |||
Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAG 1777
Query 68416 TACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAA 68475
||||| || ||||| | ||| | |||| ||| |||||| ||| |||||||| |
Sbjct 1776 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCA 1717
Query 68476 TAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTA 68535
|| | || | || | ||| || || | ||||| ||||| || || || |||||||||
Sbjct 1716 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTA 1657
Query 68536 TCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCT--TAAAAATCT 68593
|| |||||||| | ||| | || | | ||| ||||| | || | || ||||||
Sbjct 1656 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 1597
Query 68594 GTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTA 68650
|| || || | |||| | | ||| ||| || |||||| | | | || || |
Sbjct 1596 CTT--ATTTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAA 1539
Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710
||| || || || |||| ||| || | | || ||| | | || || || | |
Sbjct 1538 GATTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGT 1479
Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770
| |||| ||||||| |||||||| ||||| | ||||||||| ||| | ||||
Sbjct 1478 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 1419
Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830
| | ||||||| | || || |||||||| ||||| || ||||| |||||||| || | ||
Sbjct 1418 CAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCA 1359
Query 68831 ATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAA 68890
| | | ||| | | ||| ||| || || || ||||| || ||| |||||||
Sbjct 1358 ACAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAA 1299
Query 68891 GATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATC 68950
| || | || | ||| | ||| || ||||| || || | ||||| | ||
Sbjct 1298 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGC-TGGACTC 1240
Query 68951 CATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCA 69009
| || |||||| || | ||||| | ||| |||| ||||||||| || |||||||||
Sbjct 1239 CCTTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCA 1180
Query 69010 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAAT 69069
|| |||||||||||||| || || | | |||||||| | ||||| | ||| ||| |
Sbjct 1179 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAA 1120
Query 69070 GGATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCT 69128
|| || | | | | | ||| |||||||||| |||||||| |||||||| ||||||||
Sbjct 1119 GG-TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 1061
Query 69129 ATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 69188
|||||| |||||||| ||| ||||| || | ||||||| | |||| ||| || | |||
Sbjct 1060 GTGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTT 1001
Query 69189 ATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCC 69248
|| | |||| | ||| | || | || |||| || ||||| |||||
Sbjct 1000 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTT 941
Query 69249 ATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTAC--CTCATTA 69306
|| | ||||||||| || ||||||| || || || ||||||||||| || || ||
Sbjct 940 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTC 881
Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366
| || ||||| | | ||| || || ||||| |||||||| || || || ||||||
Sbjct 880 TGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTT 823
Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426
| ||||||||||| ||||||| || ||||| || | || | || |||||||| ||
Sbjct 822 TTTTGATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCT 763
Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTAC-GGTCTTGTAA-- 69483
| || | ||| ||||| || ||||| | || || | | | || || || |||
Sbjct 762 ACTTGGGCTTCTATAATTGACTTCCATA--ACTCTTG-AGCTCGGACTTGTTTTATAAAT 706
Query 69484 CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCC 69543
|| | |||| |||||||| |||||||| ||||||||| ||||| || ||| |
Sbjct 705 CGTGTTTCTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATAACAGTCAGCG 646
Query 69544 AATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTC 69603
| || ||||| |||| |||||||| | ||| || ||||||| | |||| ||||
Sbjct 645 AGGCCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTC 586
Query 69604 ATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTT 69663
||||| ||||| |||||||| | ||| ||| || ||||| | ||| ||||||| ||
Sbjct 585 ATAAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 526
Query 69664 CCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 69723
|||||||| || || | ||| | ||||| | || || | |||||| || |||| |||
Sbjct 525 CCTGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATAA 466
Query 69724 ATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTA 69783
|| || | | || || ||||| ||||| || ||||||| ||||||||||| || |||
Sbjct 465 ATTGCAAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 406
Query 69784 TAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTT 69843
|| ||||||| ||| || | | |||||| || ||||| || |||| || |||
Sbjct 405 TACACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAA 346
Query 69844 CCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGA 69903
|| || | || | || || |||||| || || || |||||| ||||
Sbjct 345 CCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAAT 286
Query 69904 GCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGA 69963
||||| |||| || || ||| | ||||| || |||||||| ||| |||| | |||
Sbjct 285 GCACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGG 226
Query 69964 AAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGA 70023
|| || || | || | || || | || || | |||||| ||||||
Sbjct 225 AAGCAAGAGGAAAGCTGTGGCCGTGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCGTGT 166
Query 70024 GTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTG 70082
|| || |||| || || | || ||| || || | || || || || || ||| |
Sbjct 165 GTAAAATATTTCTCCGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCACCG 106
Query 70083 ATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131
||||| ||||| | ||| | ||| | ||| || ||||||| ||| |||
Sbjct 105 -TGAATACCTATTGAGACTCTCATAAGCATGTGTTGAGGTCTTTCAACC 58
>seq242670
Length=698
Score = 104 bits (114), Expect = 3e-17
Identities = 89/110 (81%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194
||||| | ||| ||||||| |||||| |||||| ||||||||| |||||||||||||||
Sbjct 391 TTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 450
Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
||| ||||| || |||| ||| |||| | || ||| ||||||| |||
Sbjct 451 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500
>seq36366
Length=4232
Score = 102 bits (112), Expect = 1e-16
Identities = 156/220 (71%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
||||||| ||| ||| | ||| || || || | ||| ||||| |||||||| ||||
Sbjct 2356 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCACGTTTTT 2415
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| | ||||||||| | |||||| || || || || || ||||| ||||| ||||| |
Sbjct 2416 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCTTCAACTGCCGCAAAAG 2475
Query 39759 CAACAAGTCTCTCTCCGTAACTTGTA-TCATTATGT--ATCCACTTCTGTGCCCAATCAG 39815
||| || | ||||| | | | | || | || ||||||| |||||| || |
Sbjct 2476 CAATAATACGTTCTCCAAATGTAGCAGTCTTGCTGCCGATCCACTGTAATGCCCAGTCTG 2535
Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855
| |||||||||||||| || | || || || ||||||||
Sbjct 2536 CCTTCTTCTTTACACACGGTAGAGTCTCAATTGCATTAAA 2575
Score = 89.7 bits (98), Expect = 7e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| |||| ||||||||||| || ||||||||||| || || || ||||| ||||| | |
Sbjct 3607 TTGGATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3666
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATT 40209
||||| || ||||||| ||||| || ||||| || | |||||||
Sbjct 3667 CATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTTGGATT 3713
>seq187312
Length=1851
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/129 (76%), Gaps = 4/129 (3%)
Strand=Plus/Plus
Query 162494 TTATGACCCC--TATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATT 162551
||||||| || ||||| |||||| |||| ||| | ||| | || ||| | | ||| |
Sbjct 1037 TTATGACTCCAGTATTA--CCTATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1094
Query 162552 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGT 162611
||||||| |||| ||| |||||| | || | ||||||||||| ||||| || |||||
Sbjct 1095 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATTAAATATGATGGAGAACGGGTTCAAGT 1154
Query 162612 TCATAAAAA 162620
||||||||
Sbjct 1155 GCATAAAAA 1163
>seq352311
Length=307
Score = 86.0 bits (94), Expect = 9e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 70345 ttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404
|| || || || ||||||||||| ||||| || |||||||| || | ||| ||||| ||
Sbjct 278 TTCTTGGTGTCTTTGTGTAAATTGGATATTGCGATTCTGGCAGCCAAAATGGCATAATCG 219
Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTA 70444
||||| | ||| || ||||||||| ||||| |||||||
Sbjct 218 GGATGATCTGTTGTCTTAGTAGCTGCAATTTCAGCAGCTA 179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 681480709280640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |