Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq766 96.9 3e-15
seq36366 89.7 4e-13
seq129838 84.2 2e-11
>seq766
Length=9911
Score = 96.9 bits (106), Expect = 3e-15
Identities = 110/145 (76%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090
||| |||||||| ||||| | ||||| ||||||||||| | |||||| ||| || ||
Sbjct 2787 AATTGTCATACGAGAAGGGATGGCATGAGGATTAATAATGATATCTGGCGTTAAGCCCTC 2846
Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149
| ||| |||||||| || | || ||| ||| ||||||||||||||||||||| ||
Sbjct 2847 GCATGTAAACGGCATATC-TTCTTGTCGATACTGGATTCCACAAGTTCCTTTTTGACCGT 2905
Query 115150 TAAACGATGCAAATTTATCACCAAT 115174
| || || || ||||| |||||
Sbjct 2906 GACGGGAAGCGAACTTATCTCCAAT 2930
>seq36366
Length=4232
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853
||| ||||| ||||| |||||||| |||||||||||||| | | | || |
Sbjct 3458 GACCTAGCAGATTGGGAGACATTAAAAGATTGTGAAAAACATTTTATCAAGCAT--GTCT 3401
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
| || || ||||| || || || || || ||||| || || || || || | |
Sbjct 3400 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTAGTAGAGCGTTTCTCAC 3341
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
|||| |||||| | | ||||| | || || ||||| ||||||||||| || ||||||
Sbjct 3340 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATG 3281
Query 43974 TTCATTCGGAAATGTAC 43990
||||||| || ||||||
Sbjct 3280 TTCATTCAGAGATGTAC 3264
>seq129838
Length=2089
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|||||||||||||||||||| ||||||| | |||||||| ||| | |||| |||
Sbjct 130 CCCAAAATTGTAAATGGTCCACAAATCTTGGACAAATATGTCGGTGAGAGTGAAGCCAAT 71
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529
| | | ||||||||||| |||||||||||| | |||||
Sbjct 70 ATTAGGAGATTGTTTGCTGATGCTGAAGAAGAAGAGAAACG 30
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394393742616880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |