Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq766 96.9 3e-15 seq36366 89.7 4e-13 seq129838 84.2 2e-11 >seq766 Length=9911 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/145 (76%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090 ||| |||||||| ||||| | ||||| ||||||||||| | |||||| ||| || || Sbjct 2787 AATTGTCATACGAGAAGGGATGGCATGAGGATTAATAATGATATCTGGCGTTAAGCCCTC 2846 Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149 | ||| |||||||| || | || ||| ||| ||||||||||||||||||||| || Sbjct 2847 GCATGTAAACGGCATATC-TTCTTGTCGATACTGGATTCCACAAGTTCCTTTTTGACCGT 2905 Query 115150 TAAACGATGCAAATTTATCACCAAT 115174 | || || || ||||| ||||| Sbjct 2906 GACGGGAAGCGAACTTATCTCCAAT 2930 >seq36366 Length=4232 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853 ||| ||||| ||||| |||||||| |||||||||||||| | | | || | Sbjct 3458 GACCTAGCAGATTGGGAGACATTAAAAGATTGTGAAAAACATTTTATCAAGCAT--GTCT 3401 Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 | || || ||||| || || || || || ||||| || || || || || | | Sbjct 3400 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTAGTAGAGCGTTTCTCAC 3341 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 |||| |||||| | | ||||| | || || ||||| ||||||||||| || |||||| Sbjct 3340 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATG 3281 Query 43974 TTCATTCGGAAATGTAC 43990 ||||||| || |||||| Sbjct 3280 TTCATTCAGAGATGTAC 3264 >seq129838 Length=2089 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 |||||||||||||||||||| ||||||| | |||||||| ||| | |||| ||| Sbjct 130 CCCAAAATTGTAAATGGTCCACAAATCTTGGACAAATATGTCGGTGAGAGTGAAGCCAAT 71 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529 | | | ||||||||||| |||||||||||| | ||||| Sbjct 70 ATTAGGAGATTGTTTGCTGATGCTGAAGAAGAAGAGAAACG 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394393742616880