Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq227148 150 2e-31 >seq227148 Length=2115 Score = 150 bits (166), Expect = 2e-31 Identities = 460/704 (65%), Gaps = 28/704 (4%) Strand=Plus/Minus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| |||| || |||| ||| | |||||||| ||||| | ||||| | ||||| Sbjct 1450 TCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTACCAAGAATTTG 1391 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCT--TCTCC 110815 ||| || ||||| || ||||| || || ||||| ||| || || | ||| | | ||| Sbjct 1390 TGCAGTAGAGGCAGTCGGCATAGGGGCTATCAACAGAGAATTGCGCAAACCGTGTTTTCC 1331 Query 110816 TTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTT---CCCAC 110872 | || || ||||| || ||||||| | || | || | || ||||| Sbjct 1330 T--ATCTTGTCTTTGAGGGCAGCCCAGTCCCAA---AGGTCTGTAGGAGTTTTGTCCCAC 1276 Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932 || ||| |||| || | |||||| || ||| || | | | || || | ||| Sbjct 1275 ATATCATACTGTAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGTGCCT 1216 Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992 | ||| || |||||||| || || || | | | | ||| || |||||||| || Sbjct 1215 TCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 1156 Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATAC 111051 | ||| | | | |||| || || | | ||| || ||| | ||| | Sbjct 1155 TGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAG-GTATTCTCATCAACACAAACGC 1097 Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111 ||| || | || |||||||| | ||||||||||||||||| |||||| || || || Sbjct 1096 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCTCATATTTGAAGTTTTTGC 1037 Query 111112 AGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 111168 ||| || |||||||| || ||||||||| ||||| ||||| || ||||| Sbjct 1036 T---TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTTACAAT 980 Query 111169 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT--GACATAC 111226 |||||||||||| | | |||| | ||| ||| |||||| || ||| || Sbjct 979 CTTTGTGATTTCTTTTAACTTTTTAAAATTAAA--------TCTCTTATTTTCAACAAAC 928 Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 | ||| || || || || | || ||||| ||| || || | ||||| | Sbjct 927 ATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGAAGTGTATTGC 868 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | || || || || | ||| || ||||| || || | ||| ||||| ||||||||| Sbjct 867 ACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACTCTTC 808 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 111390 |||| || |||||||| || | |||||| || || || ||||| Sbjct 807 CTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTC 764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623069165529600