Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq227148 109 7e-19 >seq227148 Length=2115 Score = 109 bits (120), Expect = 7e-19 Identities = 465/725 (64%), Gaps = 36/725 (5%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||| | || | || ||||| | ||| ||||||| | ||||| || || ||| Sbjct 1440 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAG 1381 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 118300 || || ||||| || || || | || || || | ||| | ||| |||| || | Sbjct 1380 GCAGTCGGCATAGGGGCTATCAACAGAGAATTGCGCAAACCGTGTTTTCCTATCTTGT-C 1322 Query 118301 CTTGAGAGCGTCCCAGTC----------GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 118350 ||||| || ||||||| |||| ||| |||||| |||||||| Sbjct 1321 TTTGAGGGCAGCCCAGTCCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 1272 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 || |||| |||||||||||| ||||| || | | |||| |||| ||| || Sbjct 1271 CATACTGTAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGTGCCTTCTT 1212 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 || || ||||| | || || || | || | | ||| ||||||||||| || | Sbjct 1211 TTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTT 1152 Query 118471 CATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCC 118529 ||| | || ||| | | || || | | | || ||| | ||| |||| Sbjct 1151 GATTGAGATGTATTG-CTTTTTCACTTTCGTAAGGTATTCTCATCAACACAAACGCATCT 1093 Query 118530 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTC 118589 || | || || ||||| | ||||| || | ||||||||||| || | || Sbjct 1092 GCCATGCCCTGAACACCAATACCAATAGGTCTGTGTCTCATATTTGAAGTTTTTGCTTCA 1033 Query 118590 TCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTG 118649 || |||||||| || ||| || || | |||| ||||| || |||| ||||||| Sbjct 1032 GGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTTACAATCTTTGTG 973 Query 118650 ATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 118709 ||||| | | ||||| ||| ||| || | | |||| ||| || | ||| Sbjct 972 ATTTCTTTTAACTTTTTAAAATTAAATCT---CTTATTTTCA---ACAAACATGTTAAGT 919 Query 118710 GCGATTGACGCCAGATTACACACAG--AGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 || || || || || ||||| || | | ||| | || | |||||| | | || | Sbjct 918 GCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTGA--AGTGTATTGCACAACCT 861 Query 118768 CCGTGCACAAGTTTG-AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826 | ||||| ||| ||| || ||||| ||||| | || |||||||| ||| ||||| Sbjct 860 CAGTGCA-AAGATTGCTACATTTAATTGTGCCAAGATTTTTTTGATTACTCTTCCTGTTA 802 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 || |||||||| || | ||||||||| || || ||||| ||||| | | ||| | | Sbjct 801 CAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATTGAC 742 Query 118887 TTCCA 118891 ||||| Sbjct 741 TTCCA 737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613548201362560