Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq31018 138 1e-27 seq120779 105 7e-18 >seq31018 Length=1362 Score = 138 bits (152), Expect = 1e-27 Identities = 213/300 (71%), Gaps = 17/300 (6%) Strand=Plus/Minus Query 124506 CTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGA--ATCGACTGCTGCAACATAA 124563 ||||||| ||| |||||| | | ||| || || ||||| ||| |||||||| ||| | Sbjct 417 CTGTGCGCCTCGCCCGTGGCCACCACAAAGTCCTCGGGCGCATC--CTGCTGCAGCATGA 360 Query 124564 GCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCATCCAGGTTTC 124623 ||||||| || | |||||||| || || |||||||||||||| |||||||| | Sbjct 359 GCCACATAGCCTCCACGTAGTCGCGCGCATGGCCCCAGTCGCGCTTACTGTCCAGGTTGC 300 Query 124624 CGAGCTCGATTGGCTT-----GGCCGTCTTGTTCCACTCCGCCAAACCCAGTGTAATCTT 124678 |||| |||| || ||||| ||| | | || | |||| | || ||||| Sbjct 299 CGAGTTCGAGATGCGACATGAGGCCGAGGTGTATC--TTGGCGACACCCCGCGTGATCTT 242 Query 124679 GCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGAATGCCAGT 124735 ||||||||| || |||| ||||| ||| ||||||||||||||| | || | Sbjct 241 GCGCGTCACGAAGTTCTCG---CCGCGGCGCGGGCTCTCGTGGTTGAACAGCAGTCCGTT 185 Query 124736 ACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCCAAAGAGCTT 124795 ||||| ||||| ||||||| ||||||||||||| | ||||| || || | ||||| Sbjct 184 GCACGCGAACATGCCGTACGCCTCGCGGTAGTTTACCACTATCCAGTAGCCGTATAGCTT 125 Score = 127 bits (140), Expect = 2e-24 Identities = 214/307 (70%), Gaps = 7/307 (2%) Strand=Plus/Minus Query 158944 AACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGT 159003 || ||||| | ||||||| ||| || || || | |||||||||||| || | ||| Sbjct 429 AATTCGCGCACACTGTGCGCCTCGCCCGTGGCCACCACAAAGTCCTCGGGCGCATCCTGC 370 Query 159004 TGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCA 159063 || |||||||||||||| ||||| ||||| || |||| || |||||||||||||| Sbjct 369 TGCAGCATGAGCCACATAGCCTCCACGTAGTCGCGCGCATGGCCCCAGTCGCGCTTACTG 310 Query 159064 TCCATGTTCCCGAGCTCGA----TGAC-TTTTCCAGACTTTTTCCACTCAGCCAGACCGA 159118 |||| ||| ||||| |||| ||| | | || | | || || | ||| Sbjct 309 TCCAGGTTGCCGAGTTCGAGATGCGACATGAGGCCGAGGTGT--ATCTTGGCGACACCCC 252 Query 159119 GCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGAA 159178 ||||||||||||||||||| || | | ||||| || ||| ||||| ||||| | Sbjct 251 GCGTGATCTTGCGCGTCACGAAGTTCTCGCCGCGGCGCGGGCTCTCGTGGTTGAACAGCA 192 Query 159179 TGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCAA 159238 ||| | || ||||||| | || | ||||||||| ||| ||||||||| || Sbjct 191 GTCCGTTGCACGCGAACATGCCGTACGCCTCGCGGTAGTTTACCACTATCCAGTAGCCGT 132 Query 159239 AGAGCTT 159245 | ||||| Sbjct 131 ATAGCTT 125 >seq120779 Length=8973 Score = 105 bits (116), Expect = 7e-18 Identities = 115/149 (77%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 117282 TCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCAC 117341 ||||| || |||| | | | | ||||| |||||||| | ||||||||| || || || | Sbjct 8398 TCTTG-TCAACGGGGACATGAGGGTGAATATGTAACGGGGGCTTGCAGCGTCTTTACCCC 8456 Query 117342 CAG-CAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCC 117400 ||| |||| || ||||| || || |||| || ||||| ||||| | |||||| | ||| Sbjct 8457 CAGACAAG-CGAGTACCAAACTGACCACGGGGTTCCAATAGGTTAATGTTGTTTGACCCC 8515 Query 117401 ACAAAGTTTTGAGCCAAGTTGACAATCGT 117429 ||| ||||||||||||| ||||| || || Sbjct 8516 ACATAGTTTTGAGCCAAATTGACTATTGT 8544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542891789724800