Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq78339 89.7 4e-13
seq78338 89.7 4e-13
seq26981 89.7 4e-13
seq26979 86.0 4e-12
>seq78339
Length=2434
Score = 89.7 bits (98), Expect = 4e-13
Identities = 162/232 (70%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| ||||| || ||||| ||| |||||| | || || ||| | |
Sbjct 1737 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACTATTACGTTAGAAGTTGAAGCCTCT 1796
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| || || ||||| ||||||||||| |||| || |
Sbjct 1797 GACACAATTGAAAAT--GTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATC 1854
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| | ||||| || || || |||||||| || | |||| | |||| || ||||
Sbjct 1855 AACAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACA 1914
Query 27968 ACATCCAAAAAGA---GAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| || |||||||| || ||||| |||||||| ||||| || | || ||
Sbjct 1915 ATATTCAAAAAGAATCGA-CACTT--CATTTGGTACTGCGTCTGAGAGGAGG 1963
>seq78338
Length=1389
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| |||||||| ||||| || ||||| || |||||| | || || || | |
Sbjct 28 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACTATTACCCTGGAAGTGGAGCCCTCT 87
Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909
||| | | || || ||| ||||| ||||||||||| | || || ||
Sbjct 88 GACACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGCATCCCACCTGATCAA 147
Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969
||||| | ||||| || || || |||||||| || | |||| | |||| || |||||
Sbjct 148 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAT 207
Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| |||||||| ||| | |||||||| ||||| |||| || ||
Sbjct 208 ATTCAAAAAGAATCCACACTTCATTTGGTACTGCGTCTGCGAGGAGG 254
>seq26981
Length=233
Score = 89.7 bits (98), Expect = 4e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| ||||| |||||||| ||| |||||| | || || ||| | |
Sbjct 10 ATGCAAATCTTTGTCAAAACACTTACTGGAAAAACAATTACATTAGAAGTTGAAGCCTCT 69
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| || || ||||| ||||||||||| |||| || |
Sbjct 70 GACACAATTGAAAAT--GTAAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATC 127
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| | ||||| || || || |||||||| || | ||| | | || || ||||
Sbjct 128 AACAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGACGTACACTTTCTGACTACA 187
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTT 28007
| || |||||||| ||||||||||| || | |||||
Sbjct 188 ATATTCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTT 227
>seq26979
Length=899
Score = 86.0 bits (94), Expect = 4e-12
Identities = 151/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
||||||||||||||| ||||| |||||||| || |||||| |||| || || |
Sbjct 534 AATGCAAATTTTTGTTAAAACACTTACTGGCAAGACTATTACCCTTGAAGTTGAGCCTTC 593
Query 27849 CG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
| || || | ||| || ||| |||||| || || || || |||| ||
Sbjct 594 TGACACAATTGAAAAT--GTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGAC 651
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|| || || | |||||||| || |||||| | || || | ||||| ||||| || |||
Sbjct 652 CAACAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGACGCACTTTGTCAGACTAC 711
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCG 28004
|| || |||||||| || ||||| ||||| ||||
Sbjct 712 AATATTCAAAAAGAATCTACCTTGCACTTGGTACTGCG 749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 353120606539152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |