Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq78338 165 2e-35 seq78339 149 1e-30 seq26979 147 5e-30 seq26981 136 9e-27 seq78340 132 1e-25 seq26980 131 4e-25 >seq78338 Length=1389 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||||||||| || || || || || | || || | ||||| |||||||| Sbjct 915 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 856 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 |||||| ||||| || |||||||||||||| || |||| || || ||||| |||||||| Sbjct 855 CTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGAATACCCTCTTTGTCTTGGATCTT 796 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | ||| || ||||| || ||||| ||| |||||| || | ||||| || || || || Sbjct 795 TGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTGCCTGT 736 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||||||||| | |||||| Sbjct 735 GAGTGTCTTTACAAAGATCTGCAT 712 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || | ||| || |||||||||||||| || |||| || || Sbjct 1161 ACGAAGACGAAGAACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGT 1102 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| ||| || || || |||||||| || |||||||| || |||| || Sbjct 1101 GCGGCCATCCTCCAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCC 1042 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| || || |||||||||||||| || || || || | Sbjct 1041 CTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATGGTGTCGGATGGCTCCACTTCCAA 982 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || || ||||| ||||| | |||||| Sbjct 981 TGTGATGGTCTTCCCAGTAAGTGTCTTAACAAAGATCTGCAT 940 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| ||||| || || || | || || | |||||| Sbjct 695 AGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGCCATCT 636 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||||||||| ||||| || |||||||| || ||||||| |||||| ||||| Sbjct 635 TCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCT 576 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||| || ||||| || || ||||| ||||| || | || || || Sbjct 575 TGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTTATTGTT 516 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || || || || ||||| | |||||| Sbjct 515 TTGCCAGTAAGTGTTTTGACAAATATTTGCATT 483 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| ||||| ||||||||||| || || ||||| | | || | |||||| Sbjct 467 AGCACTAAGTGCAGAGTCGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCT 408 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||| || || || || || || |||||||| || || | || ||||| ||| Sbjct 407 TCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCC 348 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || || || |||||||| ||| || || || || || ||| Sbjct 347 TGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTC 288 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | ||||| Sbjct 287 TTGCCTGTTAGGGTCTTGACAAATATTTGCAT 256 >seq78339 Length=2434 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| ||||||||||| ||||| || || || | || || | |||||| Sbjct 2404 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGAGTGCGGCCATCT 2345 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||||||||| ||||| || |||||||||||||| || | || ||||| ||| Sbjct 2344 TCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCC 2285 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || || || |||||||| ||| || || || || || ||| Sbjct 2284 TGTATCTTAGCCTTCACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTC 2225 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | || || ||||| | ||||| Sbjct 2224 TTTCCTGTCAATGTTTTGACAAATATTTGCAT 2193 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||||||||| || |||||||| ||||| || || | ||| || | || ||||||| || Sbjct 1484 GTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCTTCCAATTG 1425 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || || || | |||||||| || ||||||| ||||||||||| || || || Sbjct 1424 CTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTT 1365 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || |||||||| ||||| || |||||| || | ||| || || || ||||| Sbjct 1364 CGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGT 1305 Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117 ||| || || || || | ||||||||| Sbjct 1304 GAGTGTTTTCACGAAAATCTGCATTTT 1278 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| |||||||| ||||||||||| || || | | || | |||||| Sbjct 2176 AGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGATAAAGTACGCCCATCT 2117 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||||| || |||||||| |||||||| || || |||| || || || || Sbjct 2116 TCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATGCCCTCTTTATCT 2057 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || ||||| ||||||||||| || ||||| || || || ||| Sbjct 2056 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGGGTTATAGTC 1997 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | ||||| Sbjct 1996 TTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || || ||||| || |||||||| | | || | |||||||||| ||| Sbjct 1711 TGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAATTGC 1652 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || || | |||||||| || |||| ||||| ||||| ||||||||| Sbjct 1651 TTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTTT 1592 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||||||||| || |||||||| || || || | ||||| || ||||| || Sbjct 1591 GCCTTCACGTTTTCAATTGTGTCAGAAGGCTCTACTTCTAACGTGATGGTTTTTCCAGTA 1532 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 |||||||| ||||| | ||||||| Sbjct 1531 AGAGTCTTAACAAAGATCTGCATT 1508 >seq26979 Length=899 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || || |||||||| |||||||| | || || | |||||||||||| || Sbjct 282 GTGCAAAGTAGATTCCTTTTGGATATTATAATCTGACAGTGTGCGTCCATCTTCCAGTTG 223 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || || | |||||| || ||||||| ||||||||||| || ||||| Sbjct 222 CTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 163 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || || ||||| || || ||||| ||| || || | ||| ||||| ||||| || Sbjct 162 TGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCTAAAGTAATCGTTTTTCCAGT 103 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| | ||||| Sbjct 102 CAGTGTTTTTACAAAAATTTGCAT 79 >seq26981 Length=233 Score = 136 bits (150), Expect = 9e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || |||||||| || || || || | ||| || | ||||||||||| |||||||| Sbjct 207 AGTAGATTCTTTTTGAATATTGTAGTCAGAAAGTGTACGTCCATCTTCCAATTGCTTGCC 148 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 ||||| ||||| |||||||| || ||||||| ||||| ||||| || || || || Sbjct 147 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCTT 88 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || ||||| || ||||||||| |||||| || | || || || ||||| || || || Sbjct 87 TACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAGTAAGTGT 28 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 27 TTTGACAAAGATTTGCAT 10 >seq78340 Length=230 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || |||||||| || || || || | ||| || | |||||||||| |||||||| Sbjct 204 AGTAGATTCTTTTTGAATATTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCC 145 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 |||||| ||||| |||||||| || ||||||| ||||| || || || || || || Sbjct 144 TGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATTTTAGCCTT 85 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || ||||| || ||||||||| |||||| || | || || || ||||| || || || Sbjct 84 TACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAGTAAGTGT 25 Query 211097 CTTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 24 TTTAACAAAGATTTGCAT 7 >seq26980 Length=2195 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| | ||| || || || ||||| ||||| |||| || |||| |||||| Sbjct 1169 AGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCCGATAGTGTCCGCCCATCT 1110 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||| || ||||| || || | ||||| || ||||||| ||||||||||| Sbjct 1109 TCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTGTCT 1050 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| |||||||| ||||| || ||||| ||| || || | ||||| || Sbjct 1049 TGAATCTTTGCCTTCACGTTCTCGATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTT 990 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | || ||||| || | ||||| Sbjct 989 TTCCCAGTTAAGGTTTTTACGAAAATTTGCAT 958 Score = 118 bits (130), Expect = 2e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || || || |||||||| | || || | ||||||||||||||| || ||| Sbjct 1610 GTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCTTCCAGCTGTTTTCCT 1551 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || || | |||||||||||||| | ||||| ||||| || || ||| || Sbjct 1550 GCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGAATTTTTGCCTTA 1491 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || ||||| ||| || || | ||||| || || || || | ||| Sbjct 1490 ACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTGCCAGTCAATGTC 1431 Query 211098 TTTACAAACACCTGCATT 211115 |||||||| | |||||| Sbjct 1430 TTTACAAAAATTTGCATT 1413 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || ||||| || || || || || | || || | ||||||||| || ||||| || Sbjct 1838 GTAGATTCTTTCTGAATATTGTAGTCTGACAGTGTGCGTCCATCTTCAAGTTGCTTTCCA 1779 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || ||||| | ||| || || || |||| || ||||| ||||| ||||| ||| Sbjct 1778 GCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCCTTATCCTGAATCTTCGCTTTA 1719 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || ||||| ||||| || || ||||| || || || || || ||| Sbjct 1718 ACATTTTCAATTGTATCAGAAGGCTCAACTTCCAGTGTGATAGTTTTGCCAGTTAGTGTC 1659 Query 211098 TTTACAAACACCTGCATT 211115 |||||||| | |||||| Sbjct 1658 TTTACAAAAATTTGCATT 1641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1149763152792240