Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq21196 116 3e-21
seq78338 89.7 4e-13
>seq21196
Length=3725
Score = 116 bits (128), Expect = 3e-21
Identities = 228/330 (69%), Gaps = 8/330 (2%)
Strand=Plus/Plus
Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774
||||||| | ||||| |||||| | ||||| | |||||||| |||| | |
Sbjct 3274 AATTTGACAAATACAATGATTACATTGTGGCTTTAAATTATTTTGATTCAAAGGCTATTA 3333
Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832
| ||||||| ||||||||||| ||||| |||||||| || |||| | | ||||| ||
Sbjct 3334 AATACAACAAGGGTTTGTTTTATTATGTACTGTGGAAGATATGTGATGGG--AAAAAATG 3391
Query 14833 GATGAACCAAAATGTGCTTGACCAATTT--TGGAAATACGTTAAACTTCGCTTACAAAAC 14890
|||| ||| |||||| | || ||||| | | ||| | ||| | |||| ||
Sbjct 3392 GATGGACCGAAATGTAGTAGAAAAATTTAAAGAATATATGCTAAGGCGTG-TTACTGAA- 3449
Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950
|| | |||| | | ||||| | || |||||| ||||||| || |||| |||||
Sbjct 3450 ACAAAATGCTATATTGGTCTGACCTCCCTTCCTTTGGACCCATTAATACAAACGACACTA 3509
Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010
| |||| || ||||| ||||| || | || || ||||||||||| |||| |
Sbjct 3510 CCTGCAGCGCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGAG 3569
Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040
|||||| |||| ||||| ||| | ||||
Sbjct 3570 CATTACTCCAAAGAAAGGTTGCAAAATTAT 3599
>seq78338
Length=1389
Score = 89.7 bits (98), Expect = 4e-13
Identities = 166/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104
|||| | | || ||||||| | || | |||||||| || ||| |||||||| ||
Sbjct 267 AAATATTTGCATACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAAT 208
Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164
||| || || | || || || | || || | || |||||||| || |||||||| ||
Sbjct 207 ATTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTG 148
Query 39165 CTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTAT 39223
|| || |||||| | || |||||||| |||||| ||| | | | | || |
Sbjct 147 TTGATCAGGTGGG-ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGT 89
Query 39224 CGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCA 39283
| | |||||| |||| || ||| | ||||| || || ||||||||||| || ||||
Sbjct 88 CAGAGGGCTCCACTTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCA 29
Query 39284 T 39284
|
Sbjct 28 T 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426236103640688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |