Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq21196 116 3e-21 seq78338 89.7 4e-13 >seq21196 Length=3725 Score = 116 bits (128), Expect = 3e-21 Identities = 228/330 (69%), Gaps = 8/330 (2%) Strand=Plus/Plus Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774 ||||||| | ||||| |||||| | ||||| | |||||||| |||| | | Sbjct 3274 AATTTGACAAATACAATGATTACATTGTGGCTTTAAATTATTTTGATTCAAAGGCTATTA 3333 Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832 | ||||||| ||||||||||| ||||| |||||||| || |||| | | ||||| || Sbjct 3334 AATACAACAAGGGTTTGTTTTATTATGTACTGTGGAAGATATGTGATGGG--AAAAAATG 3391 Query 14833 GATGAACCAAAATGTGCTTGACCAATTT--TGGAAATACGTTAAACTTCGCTTACAAAAC 14890 |||| ||| |||||| | || ||||| | | ||| | ||| | |||| || Sbjct 3392 GATGGACCGAAATGTAGTAGAAAAATTTAAAGAATATATGCTAAGGCGTG-TTACTGAA- 3449 Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950 || | |||| | | ||||| | || |||||| ||||||| || |||| ||||| Sbjct 3450 ACAAAATGCTATATTGGTCTGACCTCCCTTCCTTTGGACCCATTAATACAAACGACACTA 3509 Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010 | |||| || ||||| ||||| || | || || ||||||||||| |||| | Sbjct 3510 CCTGCAGCGCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGAG 3569 Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040 |||||| |||| ||||| ||| | |||| Sbjct 3570 CATTACTCCAAAGAAAGGTTGCAAAATTAT 3599 >seq78338 Length=1389 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104 |||| | | || ||||||| | || | |||||||| || ||| |||||||| || Sbjct 267 AAATATTTGCATACCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAAT 208 Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164 ||| || || | || || || | || || | || |||||||| || |||||||| || Sbjct 207 ATTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTG 148 Query 39165 CTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTAT 39223 || || |||||| | || |||||||| |||||| ||| | | | | || | Sbjct 147 TTGATCAGGTGGG-ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTGT 89 Query 39224 CGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCA 39283 | | |||||| |||| || ||| | ||||| || || ||||||||||| || |||| Sbjct 88 CAGAGGGCTCCACTTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCA 29 Query 39284 T 39284 | Sbjct 28 T 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426236103640688