Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq19446 257 1e-63 seq26979 122 7e-23 seq26981 98.7 8e-16 seq26980 96.9 3e-15 seq78340 95.1 1e-14 seq78338 95.1 1e-14 seq78339 86.0 5e-12 >seq19446 Length=4212 Score = 257 bits (284), Expect = 1e-63 Identities = 644/967 (67%), Gaps = 25/967 (3%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || ||||| || |||||||| || || | || || |||||||| | || | Sbjct 1655 GCCTACTTCGTAGAATGGGGCGTCTATCCTAGGAAATTCCCCGTGGATCGCATACCTATA 1714 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 || ||| | | |||||||| ||||| ||||||||||| || ||||| ||||||||||| Sbjct 1715 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1774 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | | ||| ||| ||||||||| | || |||| || || ||| |||| || Sbjct 1775 GACAGCTTAAAAGAGATTGAAGGCAGTTTTCAAGCACTGCAGCGGTCCTGCAGCGGCCGT 1834 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || || |||||||| || || ||||| ||||| || | |||||||| |||||||| Sbjct 1835 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 1894 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 || | | ||||||||||| ||||||||||||||||| ||||| ||| | ||| Sbjct 1895 TTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCATTAAAACAA 1954 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTT- 109499 || ||| | | || ||||| || || || || ||||||||| | | || || || Sbjct 1955 GCTCGCCCTGAATTAAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCCTTTC 2014 Query 109500 TTATTTTATG--CACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTT 109557 || |||| || || | | | || ||| | ||| || | || || || || Sbjct 2015 TTCTTTTTTGTTGACAAAT---CTAAGAGAACACGATTTGTGCAGTCAGTAAAGGAGTTC 2071 Query 109558 TTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAG 109617 | | | ||||||||||| || || || || || ||||||||||| || || ||||| Sbjct 2072 CTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAA 2131 Query 109618 GGTGCCAATCCGAGTCTCGGCGACGCA-ACG--CGCGACAGCAAAACGTACATTGCGTTG 109674 ||||| || || |||||| | || | | | || || | ||| | ||| Sbjct 2132 GGTGCTAACCCTGATCTCGGTAGCCCAGAAGATGGTGATTGC--TATGTAAGT----TTG 2185 Query 109675 TTAAAAGAGTTGCGCGCCATGTTGGACG-ACTTGCAAACGGCCACCAA---CAAAACGTA 109730 | ||||| || || | ||| | || | ||| || || | || || | || Sbjct 2186 ATGAAAGAATTACGTGAGATGCTCGATGAACTCTCA----GCTAAGAATGGTAAGAAATA 2241 Query 109731 CGAATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTC 109790 |||||| || || |||||||| || | |||||||| | || || || |||| Sbjct 2242 CGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTCGTTGACTACGGCAA 2301 Query 109791 GGCGCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTC 109850 ||| ||| | ||| |||| | || || || |||| || || ||||| || || ||||| Sbjct 2302 GGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTC 2361 Query 109851 AAACACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAAT 109909 |||| ||| | || |||| || | |||||||||| | |||||||| || ||| Sbjct 2362 AAAC-GATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAA 2420 Query 109910 TGTACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaa 109969 ||||| | || | | || ||| | |||| ||| |||| ||||| || | Sbjct 2421 CCTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGAAGA 2480 Query 109970 TTATAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGTCGTGCACGCCGACGACG 110029 || || | || || || ||||| || || |||||||| |||||| | ||| ||| Sbjct 2481 TTGTAGTCGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTCCATGATTACGAAGACA 2540 Query 110030 CGAATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGTGG 110089 | ||| || |||| ||| | || || || |||| |||||| || |||| |||| Sbjct 2541 ACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGG 2600 Query 110090 TGGACTA 110096 | ||||| Sbjct 2601 TTGACTA 2607 >seq26979 Length=899 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| |||||| || |||||||||||||||||||| || | || ||| |||||| Sbjct 743 ACCAAGTGCAAGGTAGATTCTTTTTGAATATTGTAGTCTGACAAAGTGCGTCCATCTTCA 684 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | |||||| || ||| | |||||||| ||||||||| ||| | || || || || | Sbjct 683 AGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGA 624 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 |||||| ||| |||| | | || || | | | ||| | ||||||||| ||| Sbjct 623 ATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGGGTAATAGTCTTG 564 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || || | |||||||| ||||||||||||| Sbjct 563 CCAGTAAGTGTTTTAACAAAAATTTGCATT 534 >seq26981 Length=233 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATT 101093 |||||||| |||||||||||||||||||| || | | ||| | | ||||||||||| Sbjct 212 TGCAAAGTAGATTCTTTTTGAATATTGTAGTCAG--AAAGTGTACGTCCATCTTCCAATT 155 Query 101094 GTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTT 101153 | |||||||| | ||||| | |||||| ||| || | |||||||||||| ||||| Sbjct 154 GCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTT 95 Query 101154 TTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCG 101213 | || |||| | | || || | || ||| | ||||| ||||| || | Sbjct 94 TAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAG 35 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 | | |||||| | ||| |||||||| Sbjct 34 TAAGTGTTTTGACAAAGATTTGCAT 10 >seq26980 Length=2195 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||| | |||||| |||||||| || |||||||| ||||| | || || |||||| Sbjct 1623 CACTAAGTGCAAGGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCTTC 1564 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 || ||||| || ||| | || ||||| |||||||| || | ||||||||||| Sbjct 1563 CAGCTGTTTTCCTGCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTG 1504 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 ||||||| || |||| | | || || | | | ||| | || || ||||| Sbjct 1503 AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTT 1444 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 ||| |||||||| || | ||||||||||||| Sbjct 1443 GCCAGTCAATGTCTTTACAAAAATTTGCATT 1413 >seq78340 Length=230 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATT 101093 || ||||| |||||||||||||||||||| || | | ||| | || ||||||||||| Sbjct 209 TGTAAAGTAGATTCTTTTTGAATATTGTAGTCAG--AAAGTGTACGACCATCTTCCAATT 152 Query 101094 GTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTT 101153 | ||||| || | ||||| | |||||| ||| || | ||||||||| || ||||| Sbjct 151 GCTTGCCTGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTATCTTGAATTT 92 Query 101154 TTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCG 101213 | || |||| | | || || | || ||| | ||||| ||||| || | Sbjct 91 TAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAATGTAATTGTTTTTCCAG 32 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 | | |||||||| ||| |||||||| Sbjct 31 TAAGTGTTTTAACAAAGATTTGCAT 7 >seq78338 Length=1389 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 || |||||||||||||||||||| || | || || |||||||||||| |||||| Sbjct 224 GTGGATTCTTTTTGAATATTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTGCCC 165 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 || | ||||| | |||||| || || | |||||||||||| ||||| ||| Sbjct 164 GCGAAAATAAGACGTTGTTGATCAGGTGGGATGCCTTCTTTGTCTTGGATTTTAGCTTTT 105 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | | || || | || | ||| | ||||||||| || || || | ||| Sbjct 104 ACATTTTCAATAGTGTCAGAGGGCTCCACTTCCAGGGTAATAGTCTTTCCAGTTAGGGTT 45 Query 101222 TTAATAAAAATTTGCAT 101238 |||| |||||| ||||| Sbjct 44 TTAACAAAAATCTGCAT 28 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || ||||||| | ||| |||| ||||||||| || ||||| ||||||||||| || | Sbjct 938 CCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 879 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| ||| |||| || ||||| || | || || | |||||||||| ||| Sbjct 878 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGA 819 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | || |||||||| || ||| ||| |||| | | || |||| || ||| Sbjct 818 ATACCCTCTTTGTCTTGGATCTTTGCTTTAACATTTTCAATAGTGTCTGAGG--GTTCAA 761 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || ||||||||||| || | ||| || | ||| || ||||| Sbjct 760 CTTCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCAT 712 >seq78339 Length=2434 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| ||| | ||| |||||||||||||| ||||| |||| | ||| | ||| Sbjct 1492 AATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCT 1433 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 |||||||| || || ||| | || | | |||||| ||| || | |||||| ||||| Sbjct 1432 TCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 1373 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAG 101204 |||||| ||| |||| | | || || | | ||| ||| | ||||| | Sbjct 1372 TGAATTTTCGCTTTTACATTTTCGATAGTGTC--GGAAGGTTCAACTTCCAAAGTAATGG 1315 Query 101205 TTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 |||| ||||| | |||||| | ||||| |||||| Sbjct 1314 TTTTACCCGTGAGTGTTTTCACGAAAATCTGCATT 1280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406504508965584