Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq227148 578 5e-160 seq36366 116 5e-21 seq242670 111 2e-19 seq187312 86.0 9e-12 >seq227148 Length=2115 Score = 578 bits (640), Expect = 5e-160 Identities = 1033/1497 (69%), Gaps = 21/1497 (1%) Strand=Plus/Minus Query 76764 ATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAG 76823 |||||| ||||| | ||||||||||| | | | ||| |||||||| |||| ||| Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAG 1777 Query 76824 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAA 76883 ||||| || ||||||| ||||| |||| ||| |||||| || || ||||| | Sbjct 1776 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCA 1717 Query 76884 TAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 76943 || |||| | || | ||| || || | || || ||||| || || || ||||||||| Sbjct 1716 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTA 1657 Query 76944 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 77003 ||||||||||| | ||| || || | | ||| ||||| | |||||| | | | | Sbjct 1656 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 1597 Query 77004 TTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTA 77060 | || || | |||| |||| ||| ||| || || ||| | | || || | Sbjct 1596 CTTATTTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAAGA 1537 Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 || || ||||| |||| ||| || | | || ||| | | || || ||| | || Sbjct 1536 TTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTTC 1477 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 |||| ||||||||||||| || ||||| | ||||||||| ||| | ||||| Sbjct 1476 ACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCA 1417 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | ||||||| |||| || | |||||| |||||||| ||||| |||||||| || | ||| Sbjct 1416 AAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAAC 1357 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | | ||| | | ||| ||| ||| || || ||||| || ||| |||||||| Sbjct 1356 AGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAGG 1297 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCA 77360 |||| ||| ||||| | ||| || ||||| || || | || || | ||| Sbjct 1296 TCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGC-TGGACTCCC 1238 Query 77361 TT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCC 77419 || |||||| || | |||||| |||| |||| ||||||||| ||||| ||||| || Sbjct 1237 TTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACC 1178 Query 77420 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGG 77479 |||||||||||||| || || | | |||||||| | ||||| ||| || | || Sbjct 1177 ATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAGG 1118 Query 77480 ATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 || | | | | | ||| |||||||| | |||||||| ||||||||||||||||| | Sbjct 1117 -TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGT 1059 Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598 ||||| |||| ||| |||| ||||| || | ||||||| | |||| || || | ||| | Sbjct 1058 GTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGT 999 Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658 | | |||| | || | || | || |||| || ||||| |||||| || Sbjct 998 TTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTTAT 939 Query 77659 CTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGT 77718 | |||||||||||| | ||||| || || || ||||||||||| || || | | Sbjct 938 TTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCTG 879 Query 77719 TGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTT 77778 | ||||| | | ||| || || ||||| |||||||| || ||||| ||||||| || Sbjct 878 AAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTTT 819 Query 77779 GGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCT 77838 | || ||||| | || || | |||||||| | || | || || || || || | | Sbjct 818 GATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACTT 759 Query 77839 GTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA--TCGC 77894 | | ||| ||||| || ||||| | ||||| |||| | | | ||| || ||| Sbjct 758 GGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCGGAC--TTGTTTTATAAATCGT 703 Query 77895 CTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAAT 77954 | ||| |||||||| |||||||| ||| ||||| ||||| || ||| | | Sbjct 702 GTTTCTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATAACAGTCAGCGAGG 643 Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCA---GTCACCATCTTCCTTAACTCGTTTC 78011 || || || |||| || ||||| | ||| |||| ||| ||| |||| |||| Sbjct 642 CCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCT---ACTCTTTTC 586 Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071 ||||| |||||||| ||||||| |||| ||| || |||| | ||| |||||| || Sbjct 585 ATAAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 526 Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 ||||||||||| || | ||| | ||||| | || || | |||||| || |||| ||| Sbjct 525 CCTGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATAA 466 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 ||||| | | ||||| ||||| || || || ||||||| ||||||||| || || ||| Sbjct 465 ATTGCAAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 406 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 || |||||||||||||| | | ||| || || ||||| || |||| || ||| Sbjct 405 TACACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAA 349 >seq36366 Length=4232 Score = 116 bits (128), Expect = 5e-21 Identities = 178/248 (72%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 48137 TAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 48196 |||| || ||||| || | | |||| |||| ||| ||| | ||| || || || Sbjct 2331 TAAAAATAAAAAATTACTAAATATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGT 2389 Query 48197 GAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAAA 48255 | |||||||| || ||||||||||| | ||||||||||| || |||| | || || | Sbjct 2390 CAATCCGGGCATCAGACCACGTTTTTTCAACCAAAATATTGAAGC-AAAGCTGCCTGAGA 2448 Query 48256 AGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC----GTAACTGGCTTCG 48311 | ||||| ||||| || |||||||| || ||| | ||||| ||| | | ||| | Sbjct 2449 AAAATATTCCTTCAACTGCCGCAAAAGCAATAATACGTTCTCCAAATGTAGCAGTCTT-G 2507 Query 48312 TTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATA 48371 || |||||| || |||||| || ||||||||||||||||| || | || || || Sbjct 2508 CTGCCGATCCACTGTAATGCCCAGTCTGCCTTCTTCTTTACACACGGTAGAGTCTCAATT 2567 Query 48372 GCATTAAA 48379 |||||||| Sbjct 2568 GCATTAAA 2575 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | | Sbjct 3607 TTGGATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3666 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATT 48733 ||||| || |||||||||||||| ||||| || | ||||||| Sbjct 3667 CATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTTGGATT 3713 >seq242670 Length=698 Score = 111 bits (122), Expect = 2e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 |||||| | ||| |||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 390 CTTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 449 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 | ||| ||||| || |||| ||| |||| | || ||| || || | ||| Sbjct 450 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500 >seq187312 Length=1851 Score = 86.0 bits (94), Expect = 9e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 170967 TTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTA 171026 |||||| ||| || ||||||||||| ||| | || | || ||| | | ||| | | Sbjct 1037 TTATGACTCCAGTATTACCTATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTATGA 1096 Query 171027 AAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTC 171086 |||||| |||| ||| |||||| | || | ||||||||||| ||||| || ||||| | Sbjct 1097 AAAAATGTCCAAATGGTATGTTTTCTGAGATTAAATATGATGGAGAACGGGTTCAAGTGC 1156 Query 171087 ATAAAAA 171093 ||||||| Sbjct 1157 ATAAAAA 1163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689179388208640