Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq227148 571 8e-158
seq242670 120 4e-22
seq36366 89.7 7e-13
>seq227148
Length=2115
Score = 571 bits (632), Expect = 8e-158
Identities = 1099/1608 (68%), Gaps = 17/1608 (1%)
Strand=Plus/Minus
Query 75359 ATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAG 75418
|||||| ||||| | || |||||||| | | | |||||||||||| |||| |||
Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAG 1777
Query 75419 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAA 75478
||||| || ||||||| ||||| |||| ||| |||||| || |||||||| |
Sbjct 1776 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCA 1717
Query 75479 TAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 75538
|| | || | || | ||| || || | || || ||||| || || || |||||||||
Sbjct 1716 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTA 1657
Query 75539 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 75598
||||||||||| | ||| || || | | ||| ||||| | |||||| | | | |
Sbjct 1656 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 1597
Query 75599 TTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTA 75655
| || || | |||| |||| ||| ||| || ||||| | | || || |
Sbjct 1596 CTTATTTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAAGA 1537
Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715
|| || || || |||| ||| || | | || ||| | | || || ||| | ||
Sbjct 1536 TTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTTC 1477
Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775
|| | ||||||||||||| || ||||||| ||||||||| ||| | |||||
Sbjct 1476 ACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCA 1417
Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835
| ||||||| |||| || | |||||| ||||| || |||||||||||||| || | |||
Sbjct 1416 AAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAAC 1357
Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895
| | ||| | | ||| ||| ||| || || ||||| || ||| ||||||||
Sbjct 1356 AGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAGG 1297
Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955
|||| || ||||| | ||| || ||||| || || | ||| || | |||
Sbjct 1296 TCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGC-TGGACTCCC 1238
Query 75956 TT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACC 76014
|| |||||| ||| || || || ||||| |||| ||| ||||| || ||||| |||||
Sbjct 1237 TTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACC 1178
Query 76015 GTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGG 76074
|||||||||||||| || || | | ||| |||| | |||| ||| || ||||
Sbjct 1177 ATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAGG 1118
Query 76075 ATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTAT 76133
|| | | | | | ||| |||||||| | |||||||| ||||||||||||||||| |
Sbjct 1117 -TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGT 1059
Query 76134 GTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTAT 76193
||||| |||| ||| ||| ||||| || | ||| ||| | |||| ||| || | ||| |
Sbjct 1058 GTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGT 999
Query 76194 TGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA 76252
| | |||| ||| || | || | || |||| || ||||| |||| | |
Sbjct 998 TTAAATTT-TGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTTA 940
Query 76253 TCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312
| | |||||||| ||||| ||||| || || || |||||||| || || || | |
Sbjct 939 TTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCT 880
Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372
| ||||| | | ||| ||||| ||||| ||||| || || || |||||||||| |
Sbjct 879 GAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTT 820
Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432
|| || ||||| ||||||| | |||||||| | | | || || ||||| || |
Sbjct 819 TGATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACT 760
Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA--TCG 76488
|| | ||| ||||| || ||||| | ||||| |||| | | | ||| || |||
Sbjct 759 TGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCGGACTT--GTTTTATAAATCG 704
Query 76489 CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548
| ||| |||||||| ||||||| ||| ||||| ||||| || ||| | |
Sbjct 703 TGTTTCTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATAACAGTCAGCGAG 644
Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608
|| ||||| |||| |||||||| | ||| | |||| | | || | ||||||
Sbjct 643 GCCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTCAT 584
Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668
||| |||||||| ||||||| |||| ||| || |||| | ||| |||||| || ||
Sbjct 583 AAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACC 524
Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728
||||||||| || | ||||| |||||| | || || | |||||| || |||| ||| ||
Sbjct 523 TGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATAAAT 464
Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788
|| | |||| || ||||| || || || ||||||| |||||||||||| || |||||
Sbjct 463 TGCAAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATA 404
Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848
|||||||||||||| | | || || || ||||| || |||| || ||| ||
Sbjct 403 CACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAACC 344
Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908
|| | || | || || ||||| || || || |||||| |||| ||
Sbjct 343 CTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGC 284
Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956
||| |||| || || ||| | || || || || ||||| || ||||
Sbjct 283 ACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCAT 236
>seq242670
Length=698
Score = 120 bits (132), Expect = 4e-22
Identities = 93/111 (84%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196
|||||| | ||| |||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 390 CTTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 449
Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247
| ||| ||||| || |||| ||| | || | || ||||||||||| |||
Sbjct 450 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500
>seq36366
Length=4232
Score = 89.7 bits (98), Expect = 7e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175
|| |||| ||||||||||| || ||||| || || || || |||||||||||||| | |
Sbjct 3607 TTGGATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3666
Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATT 47222
||||| || |||||||||| || || ||||| || | |||||||
Sbjct 3667 CATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTTGGATT 3713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 707300649784320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |