Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq227148 571 8e-158 seq242670 120 4e-22 seq36366 89.7 7e-13 >seq227148 Length=2115 Score = 571 bits (632), Expect = 8e-158 Identities = 1099/1608 (68%), Gaps = 17/1608 (1%) Strand=Plus/Minus Query 75359 ATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAG 75418 |||||| ||||| | || |||||||| | | | |||||||||||| |||| ||| Sbjct 1836 ATTTTACCTTTATCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTCCGTAAGTAG 1777 Query 75419 TACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAA 75478 ||||| || ||||||| ||||| |||| ||| |||||| || |||||||| | Sbjct 1776 TACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATAGACGTTAGTTTCCCA 1717 Query 75479 TAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTA 75538 || | || | || | ||| || || | || || ||||| || || || ||||||||| Sbjct 1716 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGGCTTTGGTCTATAAACGCTCCTCTA 1657 Query 75539 TCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGT 75598 ||||||||||| | ||| || || | | ||| ||||| | |||||| | | | | Sbjct 1656 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 1597 Query 75599 TTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTA 75655 | || || | |||| |||| ||| ||| || ||||| | | || || | Sbjct 1596 CTTATTTCTTTAGGAATTTTTGCAATATCTTGTATAGATCCATTGTTGTAAATTATAAGA 1537 Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 || || || || |||| ||| || | | || ||| | | || || ||| | || Sbjct 1536 TTTTTCATATCTTCATCCCATAAATCAGCCCGAGTCAAATCAGTGAGAAGGTGATGGTTC 1477 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 || | ||||||||||||| || ||||||| ||||||||| ||| | ||||| Sbjct 1476 ACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCA 1417 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | ||||||| |||| || | |||||| ||||| || |||||||||||||| || | ||| Sbjct 1416 AAAGATTCAGTGTTACCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGGGCTATCAAC 1357 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | | ||| | | ||| ||| ||| || || ||||| || ||| |||||||| Sbjct 1356 AGAGAATTGCGCAAACCGTGTTTTCCTATCTTGTCTTTGAGGGCAGCCCAGTCCCAAAGG 1297 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 |||| || ||||| | ||| || ||||| || || | ||| || | ||| Sbjct 1296 TCTGTAGGAGTTTTGTCCCACATATCATACTGTAGGATACCTTGGCTTGC-TGGACTCCC 1238 Query 75956 TT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACC 76014 || |||||| ||| || || || ||||| |||| ||| ||||| || ||||| ||||| Sbjct 1237 TTGATATGTGCTGTATGTGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACC 1178 Query 76015 GTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGG 76074 |||||||||||||| || || | | ||| |||| | |||| ||| || |||| Sbjct 1177 ATAATAAATTGTTTCAAATATTTGTTGATTGAGATGTATTGCTTTTTCACTTTCGTAAGG 1118 Query 76075 ATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTAT 76133 || | | | | | ||| |||||||| | |||||||| ||||||||||||||||| | Sbjct 1117 -TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTGT 1059 Query 76134 GTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTAT 76193 ||||| |||| ||| ||| ||||| || | ||| ||| | |||| ||| || | ||| | Sbjct 1058 GTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGT 999 Query 76194 TGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA 76252 | | |||| ||| || | || | || |||| || ||||| |||| | | Sbjct 998 TTAAATTT-TGAGTTACAATCTTTGTGATTTCTTTTAACTTTTTAAAATTAAATCTCTTA 940 Query 76253 TCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 | | |||||||| ||||| ||||| || || || |||||||| || || || | | Sbjct 939 TTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTACAAACTGCCACTTCTTCTTCT 880 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 | ||||| | | ||| ||||| ||||| ||||| || || || |||||||||| | Sbjct 879 GAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATTGTGCCAAGATTTTTT 820 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 || || ||||| ||||||| | |||||||| | | | || || ||||| || | Sbjct 819 TGATTACTCTTCCTGTTACAAGCATCCTTATATAACATGTATGGTGTACCAGTCTCTACT 760 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA--TCG 76488 || | ||| ||||| || ||||| | ||||| |||| | | | ||| || ||| Sbjct 759 TGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCGGACTT--GTTTTATAAATCG 704 Query 76489 CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548 | ||| |||||||| ||||||| ||| ||||| ||||| || ||| | | Sbjct 703 TGTTTCTTCTTCATATTTGGTATATAGTTCTTCGAATTCCTCTCCATAACAGTCAGCGAG 644 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 || ||||| |||| |||||||| | ||| | |||| | | || | |||||| Sbjct 643 GCCGGGACAATCATGAGGACACATGAGACTCCAAACGTCATCATTTTCTACTCTTTTCAT 584 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 ||| |||||||| ||||||| |||| ||| || |||| | ||| |||||| || || Sbjct 583 AAACAGATCAGGAATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACC 524 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||||||| || | ||||| |||||| | || || | |||||| || |||| ||| || Sbjct 523 TGTATTCTTCTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAATAAAT 464 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || ||||| || || || ||||||| |||||||||||| || ||||| Sbjct 463 TGCAAATGCACCAGGGCGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATA 404 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 |||||||||||||| | | || || || ||||| || |||| || ||| || Sbjct 403 CACTCTCAACATTGGCACTAGACCATTCGAGACGCCATTAGTGCCAGCTATGTAAGAACC 344 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 || | || | || || ||||| || || || |||||| |||| || Sbjct 343 CTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGC 284 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956 ||| |||| || || ||| | || || || || ||||| || |||| Sbjct 283 ACACTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCAT 236 >seq242670 Length=698 Score = 120 bits (132), Expect = 4e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 |||||| | ||| |||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 390 CTTATTGTCTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 449 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 | ||| ||||| || |||| ||| | || | || ||||||||||| ||| Sbjct 450 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTATTTTT 500 >seq36366 Length=4232 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || |||| ||||||||||| || ||||| || || || || |||||||||||||| | | Sbjct 3607 TTGGATAAGTCTACTTCTTCCGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3666 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATT 47222 ||||| || |||||||||| || || ||||| || | ||||||| Sbjct 3667 CATATGTCTGGATATTGGATTGGGAATATAACGAAACGTCTTGGATT 3713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707300649784320