Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq26979 134 3e-26 seq78339 118 2e-21 seq26980 107 4e-18 seq422991 105 2e-17 seq78338 95.1 3e-14 >seq26979 Length=899 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 ||||| |||||||| || ||||| || | ||||| | |||||||| || |||||| Sbjct 731 GTAGATTCTTTTTGAATATTGTAGTCTGACAAAGTGCGTCCATCTTCAAGTTGTTTCCCA 672 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || ||||||||||| ||||| | | || || ||||| |||||||||||| ||| Sbjct 671 GCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTTA 612 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| ||| ||| |||||||| |||||||| ||||| || || || Sbjct 611 ACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGGGTAATAGTCTTGCCAGTAAGTGTT 552 Query 152088 TTCACGAAGACCTGCATTTTACCC 152111 || || || | |||||| |||| Sbjct 551 TTAACAAAAATTTGCATTCCACCC 528 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || ||||| || ||||| || || || || | | ||| | |||||| Sbjct 518 AGGACTAAGTGCAGTGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCT 459 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| ||| || ||||| || ||||| || || || | | || |||||||| || Sbjct 458 TCTAGCTGTTTGCCAGCGAAAATCAGCCTTTGTTGATCTGGAGGAATACCTTCCTTATCC 399 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| || ||| | |||| | || ||| || ||||| | || || ||| Sbjct 398 TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTGATTGTT 339 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 ||||| || || || || || || | |||||| |||| Sbjct 338 TTGCCTGTCAGTGTTTTAACAAAAATTTGCATTCCACCC 300 >seq78339 Length=2434 Score = 118 bits (130), Expect = 2e-21 Identities = 156/213 (73%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| |||||||| |||||||| |||| | ||| | || ||||| | Sbjct 1487 CAAG-TGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCTTCCA 1429 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || || || || | | || || || | | || |||||||| ||||| Sbjct 1428 ATTGCTTT--CCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 1371 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| ||| ||| | || | |||| ||| || ||||| | |||||| ||||| Sbjct 1370 AATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 1311 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||| || |||||||| | ||||||||| Sbjct 1310 ACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 1278 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| |||||||||||||| || | |||||| | ||||||| Sbjct 2176 AGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGATAAAGTACGCCCATCT 2117 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||| |||||||| | || || || | | || || || || ||| Sbjct 2116 TCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATGCCCTCTTTATCT 2057 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | |||| || ||| || || || || ||||| Sbjct 2056 TGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGGGTTATAGTC 1997 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| || || | ||||| Sbjct 1996 TTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 >seq26980 Length=2195 Score = 107 bits (118), Expect = 4e-18 Identities = 156/217 (72%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||||||||| || || || ||||| || | || || | |||||||| | Sbjct 1392 CAAG-TGTAAAGTAGACTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCAA 1334 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || || ||||| || ||||| || | | ||||| || || || || Sbjct 1333 GCTGCTTT--CCTGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTG 1276 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| ||| ||| | || | | || ||| ||| ||||| ||||| ||||| || Sbjct 1275 AATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCTAGAGTGATAGTCTT 1216 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 ||| || || ||||||||||| | |||||| |||| Sbjct 1215 GCCAGTCAGTGTCTTCACGAAAATTTGCATTCCACCC 1179 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| || ||||| || || || |||| | || | |||||| Sbjct 2081 AGTACTAAATGTAAAGTAGATTCCTTTTGTATATTATAGTCGGAGAGTGTGCGTCCATCT 2022 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || || |||||||| || || || | | || ||||| || || Sbjct 2021 TCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGATCTGGAGGAATGCCTTCTTTATCC 1962 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || |||||| | || | |||| ||| || ||||| | |||||||||| Sbjct 1961 TGAATCTTGGCCTTGACATTTTCAATTGTGTCAGAAGCTTCCACTTCTAAAGTAATAGTT 1902 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || |||||||| || | |||||| Sbjct 1901 TTGCCAGTAAGTGTCTTCACAAAAATTTGCATT 1869 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || || || || || || ||||| | | || | |||||||| || ||| || Sbjct 1610 GTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGTCCATCTTCCAGCTGTTTTCCT 1551 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || || |||||||| ||||| | | ||| ||||| || |||||||||||| || Sbjct 1550 GCAAAAATTAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGAATTTTTGCCTTA 1491 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | |||| | || ||| |||||||| | || || |||||||| || | ||| Sbjct 1490 ACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTGCCAGTCAATGTC 1431 Query 152088 TTCACGAAGACCTGCATT 152105 || || || | |||||| Sbjct 1430 TTTACAAAAATTTGCATT 1413 Score = 87.8 bits (96), Expect = 4e-12 Identities = 146/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 ||||| ||||| || || ||||| || | | || | |||||||| || ||||| | Sbjct 1838 GTAGATTCTTTCTGAATATTGTAGTCTGACAGTGTGCGTCCATCTTCAAGTTGCTTT--C 1781 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 | || || ||||| || ||||| || | | || || ||||| || ||||| || || Sbjct 1780 CAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCCTTATCCTGAATCTTCGCTT 1721 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 | ||| | || | | || ||| ||| ||||| || || ||||||||||| || || | Sbjct 1720 TAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAGTGTGATAGTTTTGCCAGTTAGTG 1661 Query 152086 TCTTCACGAAGACCTGCATTTTACCCTTA 152114 |||| || || | |||||| |||| || Sbjct 1660 TCTTTACAAAAATTTGCATTCCACCCCTA 1632 >seq422991 Length=614 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| | || || || ||||| |||||||| || | || || | |||||| Sbjct 32 AGCACAAGATGTAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCT 91 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| ||| || || ||||| | | |||||||| | | || |||||||| ||| Sbjct 92 TCTAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCT 151 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| | |||| | || || || || ||||| ||||| ||| Sbjct 152 TGGATCTTAGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTT 211 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || ||||| ||||| | |||||| Sbjct 212 TTACCCGTAAGGGTCTTGACGAAAATTTGCATT 244 >seq78338 Length=1389 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | |||||| ||||||||||||||||| || | | ||| | ||||| Sbjct 1151 AGAACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCC 1092 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || || |||||||| | ||| ||||| | | || || ||||| ||| Sbjct 1091 TCCAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 1032 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | | |||| || ||| ||||| | || || || Sbjct 1031 TGGATCTTAGCCTTAACATTTTCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTC 972 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || |||| |||||| Sbjct 971 TTCCCAGTAAGTGTCTTAACAAAGATCTGCAT 940 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || ||||| ||||||||||| || |||||||| | ||||| | |||||||| | Sbjct 458 TGCAGAGTCGACTCTTTTTGAATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTGC 399 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || || || || | ||| ||||| | | ||| || ||||| || || || || Sbjct 398 TTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGTATCTTA 339 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || ||| |||| | |||| || |||||||| || ||||| || ||||| || Sbjct 338 GCCTTCACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTGCCTGTT 279 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || | ||||| Sbjct 278 AGGGTCTTGACAAATATTTGCAT 256 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| |||||||| || || ||||| || | | ||| | ||||| || | Sbjct 918 CAAG-TGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCA 860 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||| || || | || ||||| | | || || || || ||||| | Sbjct 859 GCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGAATACCCTCTTTGTCTTGGA 800 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||| ||| | || | ||||||| || ||||| | || |||||||||| Sbjct 799 TCTTTGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTGC 740 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 739 CTGTGAGTGTCTTTACAAAGATCTGCAT 712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1144475134206096