Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq36366 150 2e-31 >seq36366 Length=4232 Score = 150 bits (166), Expect = 2e-31 Identities = 162/212 (76%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 |||||||||| ||||||| |||| ||||| || ||||||| |||||| |||||||| | Sbjct 3239 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 3298 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCAT-TAAAAAATCTTTTAGCT 23895 |||| ||||| || || || ||||||| || |||||| || | | | ||| | || || Sbjct 3299 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCTA-CT 3357 Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955 || || || ||||||||||||||| ||| |||||||| || | |||| || |||||| Sbjct 3358 AAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAA 3417 Query 23956 TGTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 ||| ||||| | | |||| | | |||||| Sbjct 3418 TGTTTTTCACAATCTTTTAATGTCTCCCAATC 3449 Score = 102 bits (112), Expect = 8e-17 Identities = 172/248 (69%), Gaps = 1/248 (0%) Strand=Plus/Plus Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 |||||| || ||||| || | || ||| |||||||| ||| | |||||| || Sbjct 2329 AATAAAAATAAAAAATTACTAAATATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAA 2387 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || ||||| ||||| | || |||||||| | ||||||||||| |||||| || || Sbjct 2388 GTCAATCCGGGCATCAGACCACGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 2447 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682 || || || || ||||| |||||||| || | || |||| |||||||| ||| | | Sbjct 2448 AAAAATATTCCTTCAACTGCCGCAAAAGCAATAATACGTTCTCCAAATGTAGCAGTCTTG 2507 Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742 ||||| | | || ||| | |||||| ||||||||| | || |||||| Sbjct 2508 CTGCCGATCCACTGTAATGCCCAGTCTGCCTTCTTCTTTACACACGGTAGAGTCTCAATT 2567 Query 23743 GCTTTTAA 23750 || || || Sbjct 2568 GCATTAAA 2575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517367097526400