Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq19446 178 9e-40 seq78339 113 3e-20 seq422991 111 1e-19 seq26979 98.7 7e-16 seq78338 93.3 3e-14 seq26980 91.5 1e-13 >seq19446 Length=4212 Score = 178 bits (196), Expect = 9e-40 Identities = 773/1208 (64%), Gaps = 41/1208 (3%) Strand=Plus/Minus Query 5735 TGTTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCC 5793 ||||||| | |||| || ||||||| || | | || ||||| || |||||||||||| Sbjct 2846 TGTTACCGAGACCCATG-TTCATGGCATTCAGTAGATCACCGTTATCAGCGTCGATTTCC 2788 Query 5794 CATCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGAC 5853 || |||| ||||| || ||| || | | |||||||| ||||| | | || || Sbjct 2787 CAAGCAAAGAGACCGCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGAT 2728 Query 5854 CTCTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGC 5907 || | | ||| || || || ||||| | |||| |||| | ||||| || ||||| Sbjct 2727 CTAGCATTGTCATAAGTTACAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGTGCTTGG 2668 Query 5908 GCCACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTT 5954 || || |||||||| | | ||| | || | |||| || || | Sbjct 2667 GCGACATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCCCT 2609 Query 5955 GTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAA 6014 |||||| || || |||| || ||| | ||| || || || || || || |||||||||| Sbjct 2608 GTAGTCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 2549 Query 6015 GGGATTGTTGT--TGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACG 6072 |||| |||||| | || || || || ||| ||| || | || ||||| || || Sbjct 2548 GGGAATGTTGTCTTCGTAATCATG--GACGCCAGTCCAGCCACGACCATACATAGCAACA 2491 Query 6073 CCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCG 6132 || || || | || || || ||||| | ||| | || | || || |||| | Sbjct 2490 CCGACTACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCA 2431 Query 6133 GTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGA 6192 | ||||| |||| |||| ||||||| |||||||||| || || || |||| ||| Sbjct 2430 GATGTGTAGGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 2371 Query 6193 TCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATAC 6252 ||| ||||||||||||||||| || || |||| | |||||||||||||| ||| Sbjct 2370 GTATCGTTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 2311 Query 6253 TCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCTT 6312 | || || ||||| || || || | ||||| || | || |||| || || Sbjct 2310 TTTTGAGCCTTGCCGTAGTCAACGACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAA 2251 Query 6313 GTGAGCAGATACTTGCGACCCGTGCGAGTCTCCAGACCGTCCAGCATGGACCTGAGGTCG 6372 || | || || ||| | || || | || ||||| | | || Sbjct 2250 GTTAATTCGTATTTCTTACCATTCTTAGCTGAGAGTTCATCGAGCATCTCACGTAATTCT 2191 Query 6373 CCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGATTGGCT 6432 || | | |||| | || || ||| | | || | |||| || || Sbjct 2190 TTCATCAAACTTACATAGCAATCACCATCTTCTG---GGCTACCGAGATCAGGGTTAGCA 2134 Query 6433 CCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAGTTTCC 6492 || ||||| || || || |||||||| || || || || |||||||| ||||| ||| Sbjct 2133 CCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGA 2074 Query 6493 AGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAGCTGGTAA 6552 || || || | || || || || |||| ||| |||| | | | Sbjct 2073 AGGAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACAAAAAAGAAG 2014 Query 6553 AAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGATGCGGATTGTG- 6611 || ||||| |||||||||||||| || ||||| || || | | || | | | | Sbjct 2013 AAAGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTA-ATTCAGGGCGAGC 1955 Query 6612 TTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA----CATTTCCGAGTAGGCCT 6667 || | || | ||| | || || || || || ||||| |||| | || | Sbjct 1954 TTGTTTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGAC-- 1897 Query 6668 CGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCTTGAAGT 6727 | || || || |||||||||| ||| ||||| |||||| || || || ||||||| Sbjct 1896 --AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGT 1839 Query 6728 CGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTTTCAGAG 6787 | || || || ||| || |||||||| |||| || ||| | || ||| | || Sbjct 1838 CCTCACGGCCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTA-AG 1780 Query 6788 C-GTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGTGTGAGA 6846 | ||| ||||| || || || ||||| || || | || ||||| |||| ||| || ||| Sbjct 1779 CTGTCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGA 1720 Query 6847 TTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACTCCACGAAG 6906 || || || || || | || |||| || | || || || ||||| || |||||| Sbjct 1719 TTAGGTATAGGTATGCGATCCACGGGGAATTTCCTAGGATAGACGCCCCATTCTACGAAG 1660 Query 6907 TAAGCTCC 6914 || || || Sbjct 1659 TAGGCACC 1652 >seq78339 Length=2434 Score = 113 bits (124), Expect = 3e-20 Identities = 168/237 (71%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| || | || || || ||||| ||| ||||||||||||||| Sbjct 2201 TATTTGCATACCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTT 2142 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | | ||| | || |||| ||||| ||||||||||| | ||| || || Sbjct 2141 GTAGTCTGATAAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTG 2082 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||||| || | || || || || ||||| ||| | || | |||||||| | Sbjct 2081 ATCTGGGGGAATGCCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGA 2022 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||||| || || ||||| || || |||||||| || || |||||||| Sbjct 2021 TGGCTCCACCTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||||||| | || |||| ||||| || || ||||| || || Sbjct 1973 TATTTGCATACCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATT 1914 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | || ||| | || |||| ||||| || || || || | ||| || || Sbjct 1913 GTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTG 1854 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||||| ||| | ||||| || || || || ||| | || | || ||||| | Sbjct 1853 ATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGA 1794 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||| || || | |||||| || ||||| ||||| || || || ||||||||||| Sbjct 1793 GGCTTCAACTTCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 1737 >seq422991 Length=614 Score = 111 bits (122), Expect = 1e-19 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| |||||||| || | | | || | || || ||||| || || |||||| Sbjct 53 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 112 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| || ||||| |||| || | ||||||||| || ||||| || | || Sbjct 113 ATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTT 172 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 |||| || || | || ||||||||| | ||||| || || ||||| |||||||| ||| Sbjct 173 TCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 232 Query 44327 AAGATTTGCATGATGTGA 44344 || |||||||| ||||| Sbjct 233 AAAATTTGCAT--TGTGA 248 >seq26979 Length=899 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || || || | |||||| | ||| | || ||||||||||| || || Sbjct 312 TTGCATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATA 253 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | ||| ||| | || ||||| ||||| || || || |||| | || ||||| Sbjct 252 ATCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATC 193 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | |||||||| || ||||| ||| | || | || || || | | Sbjct 192 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCAATTGTATCAGAAGC 133 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | |||||||| ||||| || || || || || || |||||||| Sbjct 132 TTCCACTTCTAAAGTAATCGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79 >seq78338 Length=1389 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || |||||||||||||| || | || ||| | || |||| ||| || || |||||| Sbjct 1130 TCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAG 1071 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | |||||| || |||| || | || ||||| || ||||| ||| | || Sbjct 1070 ATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 1011 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | |||||||||| | ||||| |||| || || ||||| || || || ||||| || Sbjct 1010 TCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACA 951 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 950 AAGATCTGCAT 940 >seq26980 Length=2195 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || || || | || ||| | ||| | || ||||| ||||| || || Sbjct 1191 TTGCATTCCACCCCTGAGACGCAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATA 1132 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| ||| | || ||||| ||||| ||||| || || | | ||| ||||| Sbjct 1131 GTCCGATAGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATC 1072 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || ||| | |||||||| || ||||| ||||| |||| | || || || | | Sbjct 1071 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTCAC-GTTCTCGATTGTATCAGAAG 1013 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||| || |||| || || || || || || | ||| || ||||| |||||||||||| Sbjct 1012 CTTCTACTTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTACGAAAATTTGCATGATG 954 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||||||||| | |||| ||| | || |||||| || || ||||| Sbjct 1419 TTGCATTCCACCTCTCAGTCGTAGTACCAAGTGTAAAGTAGACTCCTTCTGAATATTGTA 1360 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| ||| | || || |||||||| || ||||| || | | |||||||| Sbjct 1359 GTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCTGCAAAAATAAGTCTTTGCTGATC 1300 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | || || || ||| || ||| |||| || || | || || || | | Sbjct 1299 TGGGGGAATTCCCTCTTTATCCTGAATTTTC-GCTTTAACATTTTCAATTGTATCAGAAG 1241 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || ||||| || || || ||||||||||| |||||||| Sbjct 1240 GCTCAACTTCTAGAGTGATAGTCTTGCCAGTCAGTGTCTTCACGAAAATTTGCAT 1186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357216801764592