Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq19446 178 9e-40
seq78339 113 3e-20
seq422991 111 1e-19
seq26979 98.7 7e-16
seq78338 93.3 3e-14
seq26980 91.5 1e-13
>seq19446
Length=4212
Score = 178 bits (196), Expect = 9e-40
Identities = 773/1208 (64%), Gaps = 41/1208 (3%)
Strand=Plus/Minus
Query 5735 TGTTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCC 5793
||||||| | |||| || ||||||| || | | || ||||| || ||||||||||||
Sbjct 2846 TGTTACCGAGACCCATG-TTCATGGCATTCAGTAGATCACCGTTATCAGCGTCGATTTCC 2788
Query 5794 CATCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGAC 5853
|| |||| ||||| || ||| || | | |||||||| ||||| | | || ||
Sbjct 2787 CAAGCAAAGAGACCGCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGAT 2728
Query 5854 CTCTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGC 5907
|| | | ||| || || || ||||| | |||| |||| | ||||| || |||||
Sbjct 2727 CTAGCATTGTCATAAGTTACAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGTGCTTGG 2668
Query 5908 GCCACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTT 5954
|| || |||||||| | | ||| | || | |||| || || |
Sbjct 2667 GCGACATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCCCT 2609
Query 5955 GTAGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAA 6014
|||||| || || |||| || ||| | ||| || || || || || || ||||||||||
Sbjct 2608 GTAGTCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAA 2549
Query 6015 GGGATTGTTGT--TGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACG 6072
|||| |||||| | || || || || ||| ||| || | || ||||| || ||
Sbjct 2548 GGGAATGTTGTCTTCGTAATCATG--GACGCCAGTCCAGCCACGACCATACATAGCAACA 2491
Query 6073 CCCACCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCG 6132
|| || || | || || || ||||| | ||| | || | || || |||| |
Sbjct 2490 CCGACTACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCA 2431
Query 6133 GTGGTGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGA 6192
| ||||| |||| |||| ||||||| |||||||||| || || || |||| |||
Sbjct 2430 GATGTGTAGGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 2371
Query 6193 TCGGTGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATAC 6252
||| ||||||||||||||||| || || |||| | |||||||||||||| |||
Sbjct 2370 GTATCGTTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 2311
Query 6253 TCCTGCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCTT 6312
| || || ||||| || || || | ||||| || | || |||| || ||
Sbjct 2310 TTTTGAGCCTTGCCGTAGTCAACGACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAA 2251
Query 6313 GTGAGCAGATACTTGCGACCCGTGCGAGTCTCCAGACCGTCCAGCATGGACCTGAGGTCG 6372
|| | || || ||| | || || | || ||||| | | ||
Sbjct 2250 GTTAATTCGTATTTCTTACCATTCTTAGCTGAGAGTTCATCGAGCATCTCACGTAATTCT 2191
Query 6373 CCCAAGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGATTGGCT 6432
|| | | |||| | || || ||| | | || | |||| || ||
Sbjct 2190 TTCATCAAACTTACATAGCAATCACCATCTTCTG---GGCTACCGAGATCAGGGTTAGCA 2134
Query 6433 CCCTTGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAGTTTCC 6492
|| ||||| || || || |||||||| || || || || |||||||| ||||| |||
Sbjct 2133 CCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGA 2074
Query 6493 AGAAATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAGCTGGTAA 6552
|| || || | || || || || |||| ||| |||| | | |
Sbjct 2073 AGGAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACAAAAAAGAAG 2014
Query 6553 AAGGGATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGATGCGGATTGTG- 6611
|| ||||| |||||||||||||| || ||||| || || | | || | | | |
Sbjct 2013 AAAGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTTA-ATTCAGGGCGAGC 1955
Query 6612 TTTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA----CATTTCCGAGTAGGCCT 6667
|| | || | ||| | || || || || || ||||| |||| | || |
Sbjct 1954 TTGTTTTAATGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGAC-- 1897
Query 6668 CGACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCTTGAAGT 6727
| || || || |||||||||| ||| ||||| |||||| || || || |||||||
Sbjct 1896 --AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGT 1839
Query 6728 CGTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTTTCAGAG 6787
| || || || ||| || |||||||| |||| || ||| | || ||| | ||
Sbjct 1838 CCTCACGGCCGCTGCAGGACCGCTGCAGTGCTTGAAAACTGCCTTCAATCTCTTTTA-AG 1780
Query 6788 C-GTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGTGTGAGA 6846
| ||| ||||| || || || ||||| || || | || ||||| |||| ||| || |||
Sbjct 1779 CTGTCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGA 1720
Query 6847 TTGGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACTCCACGAAG 6906
|| || || || || | || |||| || | || || || ||||| || ||||||
Sbjct 1719 TTAGGTATAGGTATGCGATCCACGGGGAATTTCCTAGGATAGACGCCCCATTCTACGAAG 1660
Query 6907 TAAGCTCC 6914
|| || ||
Sbjct 1659 TAGGCACC 1652
>seq78339
Length=2434
Score = 113 bits (124), Expect = 3e-20
Identities = 168/237 (71%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| ||| || |||| || | || || || ||||| ||| |||||||||||||||
Sbjct 2201 TATTTGCATACCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTT 2142
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| || | | ||| | || |||| ||||| ||||||||||| | ||| || ||
Sbjct 2141 GTAGTCTGATAAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTG 2082
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280
||||| || | || || || || ||||| ||| | || | |||||||| |
Sbjct 2081 ATCTGGGGGAATGCCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGA 2022
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||||||||| || || ||||| || || |||||||| || || ||||||||
Sbjct 2021 TGGCTCCACCTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965
Score = 95.1 bits (104), Expect = 9e-15
Identities = 164/237 (69%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160
||||| ||| || |||||||| | || |||| ||||| || || ||||| || ||
Sbjct 1973 TATTTGCATACCTCCTCTCAGACGCAGTACCAAATGAAGTGTCGATTCTTTTTGAATATT 1914
Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220
||| || | || ||| | || |||| ||||| || || || || | ||| || ||
Sbjct 1913 GTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTG 1854
Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280
||||| ||| | ||||| || || || || ||| | || | || ||||| |
Sbjct 1853 ATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGA 1794
Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||| || || | |||||| || ||||| ||||| || || || |||||||||||
Sbjct 1793 GGCTTCAACTTCTAACGTAATAGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 1737
>seq422991
Length=614
Score = 111 bits (122), Expect = 1e-19
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|||||||| |||||||| || | | | || | || || ||||| || || ||||||
Sbjct 53 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAG 112
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
||||| || ||||| |||| || | ||||||||| || ||||| || | ||
Sbjct 113 ATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTT 172
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
|||| || || | || ||||||||| | ||||| || || ||||| |||||||| |||
Sbjct 173 TCTATAGTATCAGAGGCTTCCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 232
Query 44327 AAGATTTGCATGATGTGA 44344
|| |||||||| |||||
Sbjct 233 AAAATTTGCAT--TGTGA 248
>seq26979
Length=899
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || || || | |||||| | ||| | || ||||||||||| || ||
Sbjct 312 TTGCATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTTTGGATATTATA 253
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | ||| ||| | || ||||| ||||| || || || |||| | || |||||
Sbjct 252 ATCTGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATC 193
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| ||| | |||||||| || ||||| ||| | || | || || || | |
Sbjct 192 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCAATTGTATCAGAAGC 133
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| || | |||||||| ||||| || || || || || || ||||||||
Sbjct 132 TTCCACTTCTAAAGTAATCGTTTTTCCAGTCAGTGTTTTTACAAAAATTTGCAT 79
>seq78338
Length=1389
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
|| |||||||||||||| || | || ||| | || |||| ||| || || ||||||
Sbjct 1130 TCTTTTTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAG 1071
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|| | |||||| || |||| || | || ||||| || ||||| ||| | ||
Sbjct 1070 ATAAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 1011
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326
| |||||||||| | ||||| |||| || || ||||| || || || ||||| ||
Sbjct 1010 TCGATGGTGTCGGATGGCTCCACTTCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACA 951
Query 44327 AAGATTTGCAT 44337
||||| |||||
Sbjct 950 AAGATCTGCAT 940
>seq26980
Length=2195
Score = 91.5 bits (100), Expect = 1e-13
Identities = 165/239 (69%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || || || | || ||| | ||| | || ||||| ||||| || ||
Sbjct 1191 TTGCATTCCACCCCTGAGACGCAGCACTAAGTGCAAAGTAGATTCCTTCTGGATATTATA 1132
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | ||| ||| | || ||||| ||||| ||||| || || | | ||| |||||
Sbjct 1131 GTCCGATAGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTCTGTTGATC 1072
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| ||| | |||||||| || ||||| ||||| |||| | || || || | |
Sbjct 1071 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTCAC-GTTCTCGATTGTATCAGAAG 1013
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||| || |||| || || || || || || | ||| || ||||| ||||||||||||
Sbjct 1012 CTTCTACTTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTACGAAAATTTGCATGATG 954
Score = 87.8 bits (96), Expect = 1e-12
Identities = 162/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| |||||||||| | |||| ||| | || |||||| || || |||||
Sbjct 1419 TTGCATTCCACCTCTCAGTCGTAGTACCAAGTGTAAAGTAGACTCCTTCTGAATATTGTA 1360
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| | ||| ||| | || || |||||||| || ||||| || | | ||||||||
Sbjct 1359 GTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCTGCAAAAATAAGTCTTTGCTGATC 1300
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| || | || || || ||| || ||| |||| || || | || || || | |
Sbjct 1299 TGGGGGAATTCCCTCTTTATCCTGAATTTTC-GCTTTAACATTTTCAATTGTATCAGAAG 1241
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | || || ||||| || || || ||||||||||| ||||||||
Sbjct 1240 GCTCAACTTCTAGAGTGATAGTCTTGCCAGTCAGTGTCTTCACGAAAATTTGCAT 1186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357216801764592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |