Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27]
632,176 sequences; 365,010,054 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq78338 120 3e-22
seq78339 107 2e-18
seq26980 84.2 2e-11
>seq78338
Length=1389
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || |||||||| |||| |||| ||| ||| |||||||| || ||||| |||
Sbjct 938 CCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 879
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || ||||||||||| ||||| || ||||| |||||||| | ||||
Sbjct 878 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGA 819
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||| |||| | || | ||||||| ||| | | |||||| | || ||
Sbjct 818 ATACCCTCTTTGT-CTTGGATCTTTGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 760
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || ||||| || || || |||||||| || ||||||||
Sbjct 759 TTCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCAT 712
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| ||| || ||| || || ||||| || ||||| ||
Sbjct 254 CCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGAC 195
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || | |||||||| ||||| || || || ||||| || | ||
Sbjct 194 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGGG 135
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814
| || || ||||| |||||| |||| || || |||||| | ||||||
Sbjct 134 ATGCCTTCTTTGTCTTGGATTTTA-GCTTTTACATTTTCAATAGTGTCAGAGGGCTCCAC 76
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || || || || || || || || || |||||||||||
Sbjct 75 TTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| ||||| ||| ||| ||||| || || ||||| ||
Sbjct 710 CCTCCTCGGAGACGGAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 651
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||| || || || || || ||||| || | |||
Sbjct 650 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGA 591
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | || |||| | ||| | || |||| ||| | | ||| || | ||| ||
Sbjct 590 ATTCCTTCTTTGT-CTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAAC 532
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| ||||| ||||| || || || || || || || || |||||
Sbjct 531 TTCCAAGGTTATTGTTTTGCCAGTAAGTGTTTTGACAAATATTTGCAT 484
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || | ||||| || || || || ||||| ||||| ||
Sbjct 1166 CCACCACGAAGACGAAGAACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGAC 1107
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | ||| || || || || || || ||||||||||| | ||||
Sbjct 1106 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 1047
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||| | || | || || | ||| | | |||||| | ||||||
Sbjct 1046 ATGCCCTCCTTGT-CTTGGATCTTAGCCTTAACATTTTCGATGGTGTCGGATGGCTCCAC 988
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || || || || || || ||||| || || ||||||||
Sbjct 987 TTCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACAAAGATCTGCAT 940
>seq78339
Length=2434
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || || || || || |||||||| ||||||||
Sbjct 1507 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 1448
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || | ||||| || || || |||| || ||||| || | |||
Sbjct 1447 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 1388
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||| ||| |||| |||| || | | ||||||| | || ||
Sbjct 1387 ATGCCTTCCTTGTCT-TGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAAC 1329
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| || || ||||||||||| || || || |||||||||||||| ||
Sbjct 1328 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 1278
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || | ||| | || ||||| || ||| |||||| || ||||| ||||| ||
Sbjct 2191 CCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGAT 2132
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || ||| | || || | ||||||||||| || || || || ||||| || | ||||
Sbjct 2131 AAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 2072
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||| || | | ||| | || || | || | | ||||| | ||||||
Sbjct 2071 ATGCCCTCTTTAT-CTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 2013
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| ||||| || || || || || ||||| || || || |||||
Sbjct 2012 CTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965
>seq26980
Length=2195
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
|||||||| || |||||||| || || || ||| | || || || ||||| ||||||||
Sbjct 1148 TCCTTCTGGATATTATAGTCCGATAGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAA 1089
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791
|| || | |||||| || | |||| || |||||||| ||| | ||||| | |||
Sbjct 1088 ATTAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTGTCT-TGAATCTTTGCCTTCACGTT 1030
Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
| | || || | || || |||| || || ||||| || || | || |||||
Sbjct 1029 CTCGATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTAC 970
Query 41851 GAAAATCTGCATG 41863
|||||| ||||||
Sbjct 969 GAAAATTTGCATG 957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458650781331200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |