Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20wallacei_20[genbank_20GCA_5F900068815.1_202017-04-27] 632,176 sequences; 365,010,054 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq78338 120 3e-22 seq78339 107 2e-18 seq26980 84.2 2e-11 >seq78338 Length=1389 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || |||||||| |||| |||| ||| ||| |||||||| || ||||| ||| Sbjct 938 CCTCCTCGCAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 879 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||| ||||| || ||||| |||||||| | |||| Sbjct 878 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATTAGGCGTTGTTGGTCTGGGGGA 819 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| |||| | || | ||||||| ||| | | |||||| | || || Sbjct 818 ATACCCTCTTTGT-CTTGGATCTTTGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 760 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || |||||||| || |||||||| Sbjct 759 TTCTAATGTGATAGTTTTGCCTGTGAGTGTCTTTACAAAGATCTGCAT 712 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || ||| || || ||||| || ||||| || Sbjct 254 CCTCCTCGCAGACGCAGTACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCAGAC 195 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || | |||||||| ||||| || || || ||||| || | || Sbjct 194 AGGGTGCGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCAGGTGGG 135 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814 | || || ||||| |||||| |||| || || |||||| | |||||| Sbjct 134 ATGCCTTCTTTGTCTTGGATTTTA-GCTTTTACATTTTCAATAGTGTCAGAGGGCTCCAC 76 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || || || || ||||||||||| Sbjct 75 TTCCAGGGTAATAGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 28 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| ||| ||| ||||| || || ||||| || Sbjct 710 CCTCCTCGGAGACGGAGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 651 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| || || || || || ||||| || | ||| Sbjct 650 AGAGTGCGGCCATCTTCAAGCTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGAGGA 591 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||| | ||| | || |||| ||| | | ||| || | ||| || Sbjct 590 ATTCCTTCTTTGT-CTTGAATCTTAGCTTTAACATTTTCAATAGTATCAGATGGCTCAAC 532 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| ||||| || || || || || || || || ||||| Sbjct 531 TTCCAAGGTTATTGTTTTGCCAGTAAGTGTTTTGACAAATATTTGCAT 484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || | ||||| || || || || ||||| ||||| || Sbjct 1166 CCACCACGAAGACGAAGAACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCGAC 1107 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||| || || || || || || ||||||||||| | |||| Sbjct 1106 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 1047 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| | || | || || | ||| | | |||||| | |||||| Sbjct 1046 ATGCCCTCCTTGT-CTTGGATCTTAGCCTTAACATTTTCGATGGTGTCGGATGGCTCCAC 988 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || ||||| || || |||||||| Sbjct 987 TTCCAATGTGATGGTCTTCCCAGTAAGTGTCTTAACAAAGATCTGCAT 940 >seq78339 Length=2434 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || || || || |||||||| |||||||| Sbjct 1507 CCACCACGGAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 1448 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || | ||||| || || || |||| || ||||| || | ||| Sbjct 1447 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 1388 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| ||| |||| |||| || | | ||||||| | || || Sbjct 1387 ATGCCTTCCTTGTCT-TGAATTTTCGCTTTTACATTTTCGATAGTGTCGGAAGGTTCAAC 1329 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| || || ||||||||||| || || || |||||||||||||| || Sbjct 1328 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 1278 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || | ||| | || ||||| || ||| |||||| || ||||| ||||| || Sbjct 2191 CCACCTCGCAAACGCAGTACTAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCTGAT 2132 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || ||| | || || | ||||||||||| || || || || ||||| || | |||| Sbjct 2131 AAAGTACGCCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 2072 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||| || | | ||| | || || | || | | ||||| | |||||| Sbjct 2071 ATGCCCTCTTTAT-CTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 2013 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| || || || || || ||||| || || || ||||| Sbjct 2012 CTCCAGGGTTATAGTCTTGCCTGTTAGGGTCTTAACAAATATTTGCAT 1965 >seq26980 Length=2195 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| || |||||||| || || || ||| | || || || ||||| |||||||| Sbjct 1148 TCCTTCTGGATATTATAGTCCGATAGTGTCCGCCCATCTTCCAGTTGCTTTCCGGCGAAA 1089 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || || | |||||| || | |||| || |||||||| ||| | ||||| | ||| Sbjct 1088 ATTAGTCTCTGTTGATCTGGAGGAATGCCTTCCTTGTCT-TGAATCTTTGCCTTCACGTT 1030 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | || || | || || |||| || || ||||| || || | || ||||| Sbjct 1029 CTCGATTGTATCAGAAGCTTCTACTTCCAATGTGATGGTTTTCCCAGTTAAGGTTTTTAC 970 Query 41851 GAAAATCTGCATG 41863 |||||| |||||| Sbjct 969 GAAAATTTGCATG 957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458650781331200