Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq15400 214 2e-50 seq91968 210 2e-49 seq6456 122 7e-23 seq72952 98.7 8e-16 >seq15400 Length=3181 Score = 214 bits (236), Expect = 2e-50 Identities = 489/724 (68%), Gaps = 13/724 (2%) Strand=Plus/Plus Query 102323 TTGGACCACGCGCCCTTAAAATCGTAACTCATGAGGAATATTTTATCAAGGAACCTTTGA 102382 || ||||| || || || || || |||||||| | ||| || | ||| | | ||||| Sbjct 648 TTTGACCAGGCTCCTTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGA 707 Query 102383 GCCGCGTCGTACTTCACCACGGCAATTTTGTCGTAGCCCGAACTAATCGCGCTCGTCAGC 102442 ||| | |||| | || || ||||| || | || || ||||| || |||| | Sbjct 708 GCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAAC 767 Query 102443 TCGTACGTCTTGTTCGTTTGCAGCTGCA-GTTCGTCCAGCATGGCGCGCAACTCTTTCAG 102501 ||||| ||||| | || ||||| | | || || ||||| | || || ||||||| Sbjct 768 TCGTATTTCTTGC-CATTCTTAGCTGAAAGCTCATCGAGCATCTCACGTAATTCTTTCAT 826 Query 102502 CAAAACAAGGTACGTGTCGGCGTCGCGCTCGCCGTTGCCGAGCGCCGGGTTGGCGCCCTT 102561 |||| | || || | || || | | | ||||| | ||||| || || || Sbjct 827 CAAACTTACATAACAATCACCATCTT-CTGGGC--TACCGAGGTCAGGGTTAGCACCTTT 883 Query 102562 GCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAACTTCCACACCTGCAAAAA 102621 || || ||||||||||||||||| || || || ||||| || ||||| | | ||| Sbjct 884 ACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAA 943 Query 102622 CTCTTTAACGGATTCGACAAACACGCGC-CGCTTGTCCGCGTCGTGCATGAAATAGAACG 102680 ||| || || || | ||||| || | | ||| ||| | || |||| | Sbjct 944 CTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAG 1002 Query 102681 GGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTCAAATGCGGGTTTGCCAGCT 102740 | |||| |||||||| || ||||| || || || || ||||| | ||| || | | Sbjct 1003 GATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTT 1062 Query 102741 TGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGCGGATACGCCCT 102800 | | ||| || |||||||||||||||||||||||||||||||||| || | || | Sbjct 1063 TTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTT 1122 Query 102801 TTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGATAGCGACCTTAAAGTCTGCGCGGC 102860 |||| || ||||||| || ||||| || |||||||| | ||| || ||||| | |||| Sbjct 1123 TTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGC 1182 Query 102861 CTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCC-GGGAATGGTCTTGAGCGCGTCGTTT 102919 | | || || || ||||| |||| |||||||| || | || ||| ||| ||| Sbjct 1183 CGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGC-TGTCATTT 1241 Query 102920 AGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAGCAGATGGGACAGGTTGGGCAGC 102979 | ||||| ||||||||||| || || ||||| || |||| ||| | || || || | Sbjct 1242 ATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATA 1301 Query 102980 GGCACTTTGTCCACCGGAAA--GCCGCGGCCGTACACGCCCCACTCTACGAAATACGCGG 103037 || | ||||| || || || || || || ||||| |||||||| || ||| Sbjct 1302 GGTATACGATCCACGGGGAATTTCCTAGG--ATAGACACCCCATTCTACGAAGTAGGCGC 1359 Query 103038 CCAC 103041 |||| Sbjct 1360 CCAC 1363 >seq91968 Length=4039 Score = 210 bits (232), Expect = 2e-49 Identities = 230/306 (75%), Gaps = 5/306 (2%) Strand=Plus/Plus Query 29024 CACGCCTCAGTCATCACCCGCTGCACAAAGTCGCGGCCCTTGACGAGCAGCACGTACTCG 29083 |||||||| || |||||| ||||||| |||| |||||||| || ||| | ||||| || Sbjct 404 CACGCCTCCGTGATCACCTTCTGCACATAGTCTCGGCCCTTTACCAGCTGAACGTAGGCG 463 Query 29084 CAGCGGTCGTACCAGCGGGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTC 29143 || |||||| ||||||| ||||| |||| ||||||| |||||||| ||||| ||||| Sbjct 464 CATCGGTCGAACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCGTTCTCCCAGTCCTTG 523 Query 29144 AGACCGCCGTCGCAGCAAAAGCACCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCG 29203 || |||||||| ||| | |||||| || |||||||||||||| ||||| |||||||| Sbjct 524 AGCCCGCCGTCACAGTAGAAGCACTTAGTTTTGTCGCCCTGGCCGGTGTAGAAGAATCCC 583 Query 29204 GCCTCGGCCAACTCTTCGGGCCGCTGTTTCAACCCGCGGGGCCACTCCGCAAAGGTGCGC 29263 |||||||| | || ||||| ||| |||| | ||||||||| || ||| |||| Sbjct 584 GCCTCGGCGAGTTCCTCGGGTTTCTGCTTCATGCTGCGGGGCCAGTCGCTGAAGCTGCGT 643 Query 29264 AAACGCGCGGCTTCCGTGGCATACTGCGGGTGCGCGGCCGCCGACCGCGCCGGCGGGGCG 29323 | || || || | | ||| || ||| |||| ||| | || || |||||||| Sbjct 644 ATGCGAGCCGCCTTGGAGGCGTAGCGCGCGTGCACGG-----GGTCGGGCATGCGGGGCG 698 Query 29324 CGGTCG 29329 ||| || Sbjct 699 CGGGCG 704 Score = 116 bits (128), Expect = 3e-21 Identities = 105/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 29354 CGCACAAACGGACACTGCGGCGCCCACCGCTTGTGGTCCGTTTCCGGGTCGTCGCCCCTT 29413 |||| || || ||||| ||||||||||| | ||||||| | | || ||||||||| Sbjct 800 CGCAGGAAGGGGCACTGGGGCGCCCACCGTTGGTGGTCCTTGGCGGGATCGTCGCCCGCG 859 Query 29414 ACCCAATTCGTAATCTCTACCTTGCAAAACGCGCAGCGCACCTCGTCGCCGCGGCCCAAG 29473 ||||| ||| |||| ||||| || |||||||||||||| || || || |||||||||| | Sbjct 860 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCACCGCGGCCCAGG 919 Query 29474 TAGTAGAACCCG 29485 || ||||| ||| Sbjct 920 TAATAGAAGCCG 931 >seq6456 Length=2491 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| ||| || || |||| ||||| || || ||||||||||| || ||||| | Sbjct 983 TTCCACCTCTCAGTCTTAGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTG 1042 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | | || || || ||||| || ||| ||||||| ||||| ||||| || Sbjct 1043 ACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGG 1102 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||| || || ||| ||| || | | | |||||| ||||| Sbjct 1103 GAATCCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 1162 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | ||||| ||||||||||| | ||||| ||||| ||||||||| Sbjct 1163 CTTCAAGAGTAATAGTCTTGCCGGTAAGTGTTTTCACAAAAATTTGCATT 1212 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||||||| || ||||||||||| ||||| || | ||| || | | || || | |||| Sbjct 1237 TGCAAAGTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCCATCTTCTAACTGT 1296 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| || |||| || ||||| ||||| || | |||||||||||| || ||| Sbjct 1297 TTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATTTTT 1356 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 || || | | | |||||| | ||| ||||| || || || ||||| || Sbjct 1357 GCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCTGTC 1416 Query 21153 AACGTTTTGACAAATATTTGCATT 21176 | ||||| ||||| ||||||||| Sbjct 1417 AGTGTTTTTACAAAAATTTGCATT 1440 >seq72952 Length=1956 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | ||| |||| || | |||||||| || || || || || || | | Sbjct 564 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGAC 623 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||| || || || ||| |||| || | ||| ||||| ||| Sbjct 624 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGA 683 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || || || ||||| | ||| || ||| || || | Sbjct 684 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 743 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||| || ||||| ||||| |||||||||||||| Sbjct 744 TCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||| | ||| || ||||||||||| ||||| || | || || || | || ||||| || Sbjct 1271 ATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTCCAGTTG 1330 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||| || ||| ||||||| ||||| ||||| ||| | ||||| ||||| |||||| Sbjct 1331 TTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTT 1390 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 | ||||| | | | ||| ||| || || || | ||| ||||| || || || Sbjct 1391 TGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATGGTTTTTCCTGT 1450 Query 21152 TAACGTTTTGACAAATATTTGCATT 21176 | || || ||||| || |||||| Sbjct 1451 AAGAGTCTTAACAAAGATCTGCATT 1475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420939965535452