Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq12094 131 2e-25 seq188143 91.5 1e-13 >seq12094 Length=2216 Score = 131 bits (144), Expect = 2e-25 Identities = 165/225 (73%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 ||||||| ||| ||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct 430 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAAGCCTCGTTT 373 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 372 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 313 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || || | ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 312 AGCGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 253 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || || |||||| | | || ||||| ||||| || || Sbjct 252 TGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAACAA 208 >seq188143 Length=771 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 14516 TTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAG 14575 ||||||||||| || ||||||||||| || || || ||||| | | ||| |||||| Sbjct 184 TTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGC 243 Query 14576 TAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAAT 14635 | || | || |||| || |||||||| ||||||||| ||| ||||| ||||| || Sbjct 244 GAGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAG 303 Query 14636 ATGTTTTTAATAAAGTATTGCTC 14658 | | ||| ||||| | || ||| Sbjct 304 ACATGTTTGATAAAATGTTTCTC 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480800001905960