Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq15400 257 1e-63 >seq15400 Length=3181 Score = 257 bits (284), Expect = 1e-63 Identities = 873/1344 (65%), Gaps = 37/1344 (3%) Strand=Plus/Plus Query 35666 CCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGAATAAT 35725 || || | ||| || || || | ||| |||||||| || ||||||||||| || || | Sbjct 177 CCCATGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGA 236 Query 35726 CCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCGATCTTTCGCTGTCA 35785 || || ||| | | ||| |||| || || | | || ||||| | ||||| Sbjct 237 CCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGATCTAGCATTGTCA 296 Query 35786 TACGATATTAAGTCGCCAGAGGCGCGGTC-GAATACGTACGCAGCCTTGGCCACGTCGTC 35844 || | || | ||| |||| | |||| ||| || || | ||| | ||| || | ||| Sbjct 297 TAGGTTACAAGGTCTCCAGTTGAT-GGTCTGAAGACATAAGGAGCTTGGGCGACATTGTC 355 Query 35845 G------AATGCGTATTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCGACCAC 35898 | ||| | | | | | | ||| | || ||||||| |||||||| ||||| Sbjct 356 GTAATGAAATTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCCCTGTAGTCAACCAC 415 Query 35899 GCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTGTCACT 35958 |||| || ||| ||||| ||| ||||| || ||| |||| ||| ||| Sbjct 416 TCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTC 475 Query 35959 GTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACGAGttt 36018 | ||| | || ||||| |||||||| || || ||||| || || || || || | || Sbjct 476 TTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTT 535 Query 36019 ttttGGATTCACTCGTTGCGCGAGCAAAGCGTCCACGGCCACGTTGGCGGTGTACGGTTC 36078 || |||||||||| || || | ||| | || | | || | ||||| | ||| Sbjct 536 CTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTC 595 Query 36079 GTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTATTAGACCA 36138 || || ||||| || | |||||| || || ||||| || ||| ||| ||||| Sbjct 596 CTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTTGACCA 655 Query 36139 AGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGCTCGGTC 36198 ||||||||||| ||||||||||||| |||||| | ||| | ||| | ||| || | | Sbjct 656 GGCTCCTTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCC 715 Query 36199 GTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTCTAAAGT 36258 ||| | ||| | ||| || || |||| |||||| || | || | || | | Sbjct 716 GTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAACTCGTATTT 775 Query 36259 ACGATTCGTTTGTATTTGAACT-TGATCGAGCATGGCGCGCAATTCGCCCAATAAAGCGA 36317 | | || || |||| | ||||||||| | || ||||| || ||| | Sbjct 776 -CTTGCCATTCTTAGCTGAAAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTA 834 Query 36318 TATACGTGTTATTGTCGCGTTCCACATCGCCAACGTTTGGATTGGCGCCTTTGCCGCCCG 36377 ||| | | || ||| || | || || || || ||||| || || | Sbjct 835 CATAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTACCACCAG 891 Query 36378 GAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACAAATTCACGCA 36437 |||| |||||||| ||||| | || ||||| ||||||||||| | | ||| || | Sbjct 892 GAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTTTA 951 Query 36438 CGGATTCGACAAAAATTTGTCGCGTTCGCGCA---TCGTGCATATGATAGAAG---GGAT 36491 | || | ||||| ||| |||| | | | || | | ||||| |||| Sbjct 952 CTGACTGCACAAA------TCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAGGAT 1005 Query 36492 CGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTG-GGATTGGCCAATTTT 36550 ||| || ||||| || || || || | || | | || ||| || ||| |||| Sbjct 1006 CGGCAAGCGTCCACCCACCAATCGAGGG-AAGAATCTTCAATTCAGGGCGGGCTTGTTTT 1064 Query 36551 GCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATGCGCTAACGCCTGTT 36610 || ||||||||| ||||| |||||||||||||| |||||||||| | ||| || Sbjct 1065 AGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTT 1124 Query 36611 TGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATTGTCCCTGCCA 36670 ||||||||||| | || ||||| |||||||| || || ||||| || | || | ||| Sbjct 1125 TGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCG 1184 Query 36671 GCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACTGTCGTTTATA 36730 || || | ||||| |||| ||||| || ||| |||||| ||||| ||||| Sbjct 1185 CTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTCATTTATG 1244 Query 36731 CCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTGCGAAAGGTTCGGCGTGGGC 36790 ||||||||||||||||| || ||||| || || | | || | ||| || || | || Sbjct 1245 CCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGT 1304 Query 36791 ACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATAGGCCGCTACG 36850 | |||||||| || | | || || |||||||| || || ||||| | || Sbjct 1305 ATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCGCCCACA 1364 Query 36851 GTGTGATCAG-TGTTGTACGTATACGGTTTATTGTTTTCTTGCCACGTGTATTGTAACGG 36909 | ||| |||| | | | | |||||||| |||||| | | || |||| | || Sbjct 1365 ACTTTTCCAGATGTT-TGCTTGAATGGTTTATTTTTTTCTCCCAATGTATATTCCAGAGG 1423 Query 36910 TTTTAAATGTTTACCATCGGTGTCTGCGATCACGACTTCTACGGTTTGACTAGC-CGAA- 36967 |||||| | ||||| || || || |||||| | |||| || | || ||| Sbjct 1424 AGGTAAATGACTTCCATCAGTATCGGC---CACGACAATTTCGGTGGGA-TCGCTTGAAC 1479 Query 36968 --CAGCCGTCGGCATTGCACAGTT 36989 |||||||| ||||||| |||| Sbjct 1480 TGCAGCCGTCTTCATTGCAAAGTT 1503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416997122486240