Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq42954 538 5e-148 seq188143 95.1 2e-14 seq181590 95.1 2e-14 >seq42954 Length=2876 Score = 538 bits (596), Expect = 5e-148 Identities = 1105/1620 (68%), Gaps = 41/1620 (3%) Strand=Plus/Plus Query 78700 ATCTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 78759 || ||| | ||||| | || || ||||| | | | ||| ||||| || |||| ||| Sbjct 522 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 581 Query 78760 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAA 78819 |||||||| ||||||| ||| | |||| ||| |||||| || ||||||||| | Sbjct 582 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 641 Query 78820 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 78879 || | || | || | ||| || || | |||||||||||| || || || ||||| || Sbjct 642 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 701 Query 78880 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 78938 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 702 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 761 Query 78939 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATCCT 78995 |||| | |||| || | ||| | |||| | || |||||| | ||||| Sbjct 762 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 820 Query 78996 ATTCTTGATCTCTTCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGAT 79054 ||| || || ||||||| |||||| | |||| || ||| | | || ||||| | | Sbjct 821 ATTTTTCATATCTTCATCCCATAAATCAG-CTCGAGTCAAATCAGTCAGAAGATGATGGT 879 Query 79055 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTT 79114 | ||||| ||||||||||||| || ||||| | ||||||||| ||| |||||| Sbjct 880 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 939 Query 79115 CCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCA 79174 | | |||||| | || || | |||||| ||||| || || || ||||||||||| | || Sbjct 940 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 999 Query 79175 ATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAG-AGATTCCCAATCCC 79231 ||| | ||| | | ||| ||| | || || || ||||| || | | ||| | |||| Sbjct 1000 ATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGTCC-AGTCCC 1056 Query 79232 AAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATG 79291 |||| || | || ||||| | |||||| || || ||||| | ||||| Sbjct 1057 AAAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGAC 1116 Query 79292 ATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATG 79351 |||| ||||| || | ||||| ||||| |||||||||||||| || ||||||| Sbjct 1117 TTCCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATG 1176 Query 79352 CTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAA 79411 | || |||||||| ||||| || || | | ||| || | ||||| || || Sbjct 1177 CACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGT 1236 Query 79412 ATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 79470 | || || | | | | | ||| | ||||| | || |||||||||||||||| ||| Sbjct 1237 AAGG-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGACAGGA 1295 Query 79471 CTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 79530 | || ||| |||| ||| ||| ||||| || | ||||||| | |||| ||| || | | Sbjct 1296 CGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACT 1355 Query 79531 TTATTGAGATTCCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCG 79589 || || | |||| ||| | | | | | | || |||| ||| ||||| |||||| Sbjct 1356 TTGTTTAAATTC-TGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAATTAAATCG 1414 Query 79590 TCCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATT 79649 || | ||||||||||| | || | || || || || || || || || |||| Sbjct 1415 ATTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT- 1473 Query 79650 AGCATCCGCA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 | || | | ||||| | | |||||||| || || ||||| ||||| || || | Sbjct 1474 --CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAG 1531 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 ||||| |||||||||||| |||| || ||||||||||| | || | || |||||||| Sbjct 1532 ATTTTTTTGATTACTCTTCCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGT 1591 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA------TTATAGA 79820 || | |||| ||||||||| | ||||| | || |||| | | ||||| | Sbjct 1592 CTCCACTTGAGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTCGTTTTATAAA 1651 Query 79821 CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAAC 79880 | || |||||| ||| |||| | ||||| | |||||| || ||||| || Sbjct 1652 CC-GT-----TTTTCTTCTTCATATTTGGCATATAGTGCTTCGAATTCCTCTCCGTAACA 1705 Query 79881 ATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTAC 79940 || | | |||||||| || | ||||||||| | ||| ||| |||| | | ||| Sbjct 1706 GTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTAC 1765 Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 80000 | ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| || Sbjct 1766 CCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTC 1825 Query 80001 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 80060 || || ||||| |||||||| | ||| | |||| | | || || | |||||| || || Sbjct 1826 TTCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTC 1885 Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 80120 ||||| || || | | || || ||||||||||| || ||||||| ||||| || || Sbjct 1886 TAAGTAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGT 1945 Query 80121 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 80180 || || || |||||||||||||| | | |||||| || ||||| || || | || Sbjct 1946 ATTGTTGTACACTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTGCCAGCTAT 2005 Query 80181 ATAGCTTCCACTGGCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 80237 ||| || ||| | ||| || || || || |||||| || || || ||| Sbjct 2006 ATAAGACCCCTGGGCTCTAATGCAATGTGTA--TG-TAAACCTATGCCACCGGCAGATTT 2062 Query 80238 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCAT 80297 ||| |||||||| ||| ||||||| ||||| | || || || || ||||| || |||| Sbjct 2063 AGAAATTAATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATACTATCGTCTTTCAT 2122 Score = 102 bits (112), Expect = 1e-16 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 80478 CTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537 ||| || ||||| |||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct 2583 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 2642 Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 80588 | ||| |||| || |||| ||| | |||| | ||| ||||| | ||| Sbjct 2643 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2693 >seq188143 Length=771 Score = 95.1 bits (104), Expect = 2e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 ||||||| ||||||||||| | |||||||| ||||| || || ||||| ||||| | | Sbjct 481 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTGTACATCTGC 540 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATC 50542 || ||||| ||||||| |||||||| ||||| |||| Sbjct 541 CATATGTCTGGATATTGAATTGGGAATATAACGAATC 577 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 50254 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 50313 || |||||||||| ||||| || || || ||||| || ||||| || || || || || Sbjct 169 ATCTCCGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTC 228 Query 50314 ATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCT 50373 | || || ||| | || || || | || || ||||| || || || ||| || Sbjct 229 ACTTGAACCTCTTGCGAGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCC 288 Query 50374 GCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCG 50412 ||||| || || || |||||||| ||||||||||| ||| Sbjct 289 GCAAAGAATGCTAAGACATGTTTGATAAAATGTTTCTCG 327 >seq181590 Length=632 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 80689 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 || || || || || |||| ||| |||| ||||||||||| || |||||||||||||| Sbjct 603 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 544 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 543 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 484 Query 80809 GTTACTCCATTATATATTCC 80828 ||||| ||| |||||| || Sbjct 483 GTTACACCAGAATATATGCC 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715967224349080