Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq12094 134 1e-26 seq188143 98.7 9e-16 >seq12094 Length=2216 Score = 134 bits (148), Expect = 1e-26 Identities = 166/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 ||||||| ||| ||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct 430 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAAGCCTCGTTT 373 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 372 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 313 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 || || | ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 312 AGCGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 253 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | || || |||||| | | || || ||||||||||| || Sbjct 252 TGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAACAA 208 >seq188143 Length=771 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 13972 TTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---C 14028 ||||| ||||| || ||||||||||| || || || ||||| | | ||| ||||| | Sbjct 184 TTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGC 243 Query 14029 GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCC 14088 ||| || | || ||||||| |||||||||||||||||| ||| ||||| ||||| Sbjct 244 GAG---AAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCT 300 Query 14089 AATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCC 14148 || | | ||| ||||| | || ||| || || | | | | |||||| || || ||| Sbjct 301 AAGACATGTTTGATAAAATGTTTCTCGCAATCTTTTAATGTCTCCCAATCTGCCAAGTCC 360 Query 14149 T 14149 | Sbjct 361 T 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477055239961080