Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq42954 533 2e-146 seq188143 104 3e-17 seq181590 91.5 2e-13 >seq42954 Length=2876 Score = 533 bits (590), Expect = 2e-146 Identities = 1094/1612 (68%), Gaps = 25/1612 (2%) Strand=Plus/Plus Query 70783 ATTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAG 70842 ||||| | ||||| | ||||||||||| | | | ||| | ||| || |||| ||| Sbjct 522 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 581 Query 70843 TACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 70902 ||||| |||||||||| ||| | |||| ||| ||||| || ||||||||| | Sbjct 582 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 641 Query 70903 TAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTG 70962 ||| |||| | || | || || || | || |||||||| || || || ||||| || Sbjct 642 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 701 Query 70963 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 71021 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 702 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 761 Query 71022 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCA-ATAATCC 71077 |||| | |||| || | ||| | |||| | || |||||| | || | ||||| Sbjct 762 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGT-TGTATATAATAA 819 Query 71078 TATTTTTGATCTCTTCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGAGGA 71136 |||||| || ||||||| |||||| | |||| || ||| | | || |||||| | Sbjct 820 GATTTTTCATATCTTCATCCCATAAATCAG-CTCGAGTCAAATCAGTCAGAAGATGATGG 878 Query 71137 TTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGT 71196 || ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||| Sbjct 879 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGT 938 Query 71197 TCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 71256 || | || ||| | || || | |||||| ||||| || ||||||||||||||||| | | Sbjct 939 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATC 998 Query 71257 AATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAG-AGATTCCCAATTCCA 71315 |||||| ||| | | ||||||| | || || ||||| || | | ||| | | ||| Sbjct 999 AATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGTCC-AGTCCCA 1057 Query 71316 AAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGA 71375 ||| || | || || || | ||||| Sbjct 1058 AAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACT 1117 Query 71376 TCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGC 71435 |||| |||||| ||||| ||||||||||| |||| ||||||||| || |||||||| Sbjct 1118 TCCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGC 1177 Query 71436 TCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAA 71495 ||||||||||| ||||| || || | | ||| || | ||||| | || || | Sbjct 1178 ACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTA 1237 Query 71496 TGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTC 71554 || || | | | | | ||| | ||||| | || ||||| |||||||||| ||| | Sbjct 1238 AGG-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGACAGGAC 1296 Query 71555 TGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 71614 ||| ||| |||| ||| ||| ||||| || | ||||||| | |||| ||| || | || Sbjct 1297 GGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTT 1356 Query 71615 TATTGAGATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTC 71673 | || | ||| |||| | | | | | | || |||| ||| ||||| ||||| Sbjct 1357 TGTTTAAATT-CTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAATTAAATCGA 1415 Query 71674 CCATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 71733 || | ||||||| ||| | || | || || || || || || || || |||| Sbjct 1416 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT-- 1473 Query 71734 GCATCGGCA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790 | || | | ||||| | || |||||||||||||| ||||| || || || || | | Sbjct 1474 -CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGA 1532 Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850 |||| |||||||||||| |||| || ||||||||||| | ||| | || |||||||| Sbjct 1533 TTTTTTTGATTACTCTTCCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTC 1592 Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTAT 71910 || | |||| ||||||||| | ||||| | || |||| | | | || | | Sbjct 1593 TCCACTTGAGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTCGTTTTATAAAC 1652 Query 71911 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCT 71970 | |||||| ||| |||| | ||||| | |||||| || ||||| || | | Sbjct 1653 CGTTTTTCTTCTTCATATTTGGCATATAGTGCTTCGAATTCCTCTCCGTAACAGTCAGCG 1712 Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030 | |||||||| |||| |||||||| | ||| ||| |||| | | ||| | |||| Sbjct 1713 AGGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTC 1772 Query 72031 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 72090 ||||| ||||| || ||||| | ||| ||| || ||||| | ||| || || || Sbjct 1773 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 1832 Query 72091 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150 ||||| |||||||| | ||| | |||| | | || || | |||||| || || ||||| Sbjct 1833 CCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAA 1892 Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210 || || | | || || ||||||||||| || ||||||| ||||| || || || || Sbjct 1893 ATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTG 1952 Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270 || |||||||||||||| | | |||||| || | ||||| || || | ||||| Sbjct 1953 TACACTCTCAACATTGGCACTAGACCATTTGAAACCCCATTAGTGCCAGCTATATAAGAC 2012 Query 72271 CCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 72328 || ||| | ||| | || || || |||||| || || || |||||| |||| Sbjct 2013 CCCTGGGCTCTAATGCAATGTGTAT--GTAAACCTATGCCACCGGCAGATTTAGAAATTA 2070 Query 72329 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 |||| ||| ||||||| ||||| | || || || |||||||| || |||| Sbjct 2071 ATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATACTATCGTCTTTCAT 2122 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620 ||| || ||||| |||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct 2583 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 2642 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671 | ||| |||| || |||| ||| | || | | ||| ||||| | ||| Sbjct 2643 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 2693 >seq188143 Length=771 Score = 104 bits (114), Expect = 3e-17 Identities = 81/97 (84%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610 ||||||| |||||||||||| | |||||||| |||||||| || ||||| ||||| | | Sbjct 481 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTGTACATCTGC 540 Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAATC 42647 || || || |||||||||||||||| ||||| |||| Sbjct 541 CATATGTCTGGATATTGAATTGGGAATATAACGAATC 577 >seq181590 Length=632 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 72772 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831 || || || || || |||| ||| |||| ||||||||||| || | |||||||||||| Sbjct 603 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 544 Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 543 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 484 Query 72892 GTTACTCCATTATATATTCC 72911 ||||| ||| |||||| || Sbjct 483 GTTACACCAGAATATATGCC 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668988643493720