Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq6456 104 2e-17 seq72952 98.7 7e-16 >seq6456 Length=2491 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 || ||||||| ||||| ||||| || | || || ||||||||||| || || Sbjct 985 CCACCTCTCAGTCTTAGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGAC 1044 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | || |||| || | ||||||||||||||| || | || || ||||| | || Sbjct 1045 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGA 1104 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | ||||| |||||| ||||||| ||| || | ||| ||||| | ||||| || Sbjct 1105 ATCCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 1164 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || || ||||| | || |||||||| |||||||| Sbjct 1165 TCAAGAGTAATAGTCTTGCCGGTAAGTGTTTTCACAAAAATTTGCAT 1211 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 |||||||| || | || || || |||||||||||||| | ||| |||| Sbjct 1912 AACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCT 1971 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 || | ||||| |||||||| || | || || ||||| |||| | |||||||| ||| Sbjct 1972 TCTAGCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTCT 2031 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||||||| || || | | | ||||| | | ||||| || | ||||||||| Sbjct 2032 TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGTT 2091 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || | ||||| ||||| |||||||| Sbjct 2092 TTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 2123 >seq72952 Length=1956 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || || |||||||| || || ||||||||||||||||| || | ||| |||| Sbjct 1263 AATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCT 1322 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||| ||||||||| ||||| || | || || ||||| | || | ||||||||| ||| Sbjct 1323 TCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCT 1382 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 || ||| || || | ||| ||| || | || || || || | || || ||| Sbjct 1383 TGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATGGTT 1442 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || | |||||| ||||| || ||||| Sbjct 1443 TTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 1474 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952 |||||||| || | | ||||| || || ||| |||||| || ||||| ||||| | Sbjct 563 ACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGA 622 Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || || || |||| |||||||| || || ||||| || | || || ||||| | | Sbjct 623 CAAAGTG-CGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGG 681 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||| ||||| ||||| || || | | | || || | || || | Sbjct 682 GAATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTA 741 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | ||||| || || || ||||| || ||||||||||||||||| Sbjct 742 CTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| ||| | | |||| || || ||| |||||||||||||| || || Sbjct 1019 ACCTCCTCGCAAACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAGA 1078 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || |||| |||||||| || || ||||| || | ||||| || || |||| Sbjct 1079 TAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAGG 1138 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||| ||| |||||| || || | ||| || || | | || || Sbjct 1139 AATGCCTTCTTTGTCTTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTAC 1198 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||||||||| || || | || || ||||| |||||||| Sbjct 1199 TTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353669193511356