Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq15400 257 1e-63 seq72952 107 2e-18 seq6456 104 2e-17 >seq15400 Length=3181 Score = 257 bits (284), Expect = 1e-63 Identities = 642/966 (66%), Gaps = 23/966 (2%) Strand=Plus/Plus Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAA- 101076 || || || || ||||||| ||||||||| | || || || | ||| |||||||||| Sbjct 405 TAGTCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAG 464 Query 101077 --ATAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACG 101134 | |||||| ||| || | || ||||| |||||||| || || ||||||||||| Sbjct 465 GGAATGTTGTCTTCGTAAT--CATGA-ACGCCAGTCCAACCACGACCATACATGGCAACA 521 Query 101135 CCCACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGATTTAACAGCGTAATCC 101194 || | | ||| || || | || ||||| | | |||| || || | || Sbjct 522 CCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCA 581 Query 101195 GTGTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCCAGA 101254 | |||| || || || ||||| |||||||| | || ||||||| || ||| Sbjct 582 GATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 641 Query 101255 TCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGGAAC 101314 |||||||| || |||||||| || || ||||| | || || | ||| | | Sbjct 642 GTATCATTTGACCAGGCTCCTTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 701 Query 101315 TTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCACTT 101374 ||||| || |||| | || || ||||| || || || ||||| ||| Sbjct 702 TTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAA 761 Query 101375 GTTAATTCGTATGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCCAGCATTGCGCGCAATTC 101433 || || |||||| | ||||| | | || || || ||| || ||||| | || ||||| Sbjct 762 GTCAACTCGTATTTCTTGCCATTCTT-AGCTGAAAGCTCATCGAGCATCTCACGTAATTC 820 Query 101434 TTTCAGTAAAATGTTGTACGTGTCAGCGTCGCGTTCTTTGTTGCCGAGTGTTGGGTTGGC 101493 ||||| ||| | || ||| | || |||| | | ||||| ||||| || Sbjct 821 TTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGC 877 Query 101494 GCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGTCAAAAAATTTCCAAACCTG 101553 ||||||||||| ||||||||||||||||| ||||| || || || |||||||| | Sbjct 878 ACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAG 937 Query 101554 CAAAAATTCTTTGACAGAATCCACAAACACACGCCGTTTTATC---GCGTCGTGCA-TAT 101609 | ||| || || || || | |||||| ||| || || | | || | || Sbjct 938 GAGAAACTCCTTTACTGACTGCACAAAT------CGTGTTCTCTTAGATTTGTCAACTAA 991 Query 101610 AAT--AGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGCAAAATTTTAAGGTGTGG 101667 || |||| || |||| | ||||| || || || || || | ||| || | | || Sbjct 992 AAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGG 1051 Query 101668 ATTGGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGC 101727 ||| ||| | ||||| || ||||||||||||||||||||||||||||| | Sbjct 1052 GCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGA 1111 Query 101728 AGATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGGATAGCAACTTTAAA 101787 ||| | ||||| || |||||||||| ||| ||||| ||||||||||| | ||||| || Sbjct 1112 AGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAA 1171 Query 101788 ATCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCGGGTATGGTTTTGAG 101847 || |||||| || || ||||||| |||| ||||| || || ||| | Sbjct 1172 GTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAA 1231 Query 101848 GGCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTACAACAAATGTGAGAG 101907 | ||| || | ||| || ||||| |||||||| || || || || | |||||| | || Sbjct 1232 GCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAG 1291 Query 101908 GTTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACGCCCCATTCTACAAA 101967 || || | || | ||||| || || || | | ||| || ||||||||||| || Sbjct 1292 ATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAA 1351 Query 101968 ATACGC 101973 || || Sbjct 1352 GTAGGC 1357 >seq72952 Length=1956 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || ||||| || || |||||||||||||| ||||||||||| | ||| | |||| Sbjct 1491 AATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCT 1550 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 |||||||| || || ||| | ||||| | ||| ||||| || | ||| |||||||| Sbjct 1551 TCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 1610 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||||| ||| || | ||| || ||| |||||| ||| | |||||||| Sbjct 1611 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTC 1670 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || | ||||| |||||||| ||||| Sbjct 1671 TTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 Score = 100 bits (110), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--A 20053 ||| || |||||||| |||||||| ||||| || || ||||| ||||| | | | Sbjct 1262 CAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG--ATAGTGTACGGCCA 1319 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||||| |||||| || ||| |||||||||||||||| || ||| | ||||||||| Sbjct 1320 TCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTG 1379 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || || ||| ||||| | ||| || || ||||| || | ||| ||| Sbjct 1380 TCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATG 1439 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || | || || ||||| || |||||| Sbjct 1440 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 1475 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| | | || ||||| | |||||||||||||| |||||||| || Sbjct 1704 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG-- 1761 Query 20042 ATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| | || |||||||||||| |||||||| ||||||| | |||||||| | Sbjct 1762 AAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAG 1821 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||||||| ||||| || || | ||| | || | ||| Sbjct 1822 GAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTA 1881 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||||| ||||| || || | ||||| |||||||||||||| Sbjct 1882 CTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1930 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 |||||||| | | | ||||| || || || || ||||| || || |||||||| | Sbjct 564 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGAC 623 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||||||||| || || ||| |||| || | |||||| || ||| Sbjct 624 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGA 683 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||| || || ||||| ||||| | | | | || ||||| | Sbjct 684 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 743 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||||||||| || || || || ||||| ||||| |||||||| Sbjct 744 TCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 >seq6456 Length=2491 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || | || | ||| || || || | |||||||| ||||| || || ||||| Sbjct 1211 TTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAG 1270 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| |||||| || |||||||| || |||| ||||||||||| || | Sbjct 1271 ACAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAG 1330 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||| ||||| ||||||| || || | | | | ||| || |||| Sbjct 1331 GAATGCCTTCCTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 1390 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || |||||||| |||| ||||| ||||||||||||||| Sbjct 1391 CTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCATT 1440 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 ||||||||| || | || ||||| || || || || ||||| || || | ||| Sbjct 1911 CAACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATC 1970 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| | ||||| || ||| |||||||||||||||| ||| || | ||||||||||| Sbjct 1971 TTCTAGCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTC 2030 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 ||||||| || || | | | | ||| || |||| ||| | ||||| || Sbjct 2031 TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGT 2090 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||||| |||| || || ||||||||||||||| Sbjct 2091 TTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2124 Score = 100 bits (110), Expect = 2e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTTCCAATT 20063 || || ||||||||||| || || |||||||| ||| | || | |||||| | || Sbjct 781 TGGAGAGTAGATTCTTTCTGAATATTGTAATCAG--ATAATGTTCGTCCATCTTCAAGTT 838 Query 20064 GTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTT 20123 | || || ||| |||| | ||||||||| || ||| | |||||||||||| ||||| Sbjct 839 GCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCCTGAATTT 898 Query 20124 TTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGG 20183 || || || | | | | ||| || ||| ||||| || || |||||||| | Sbjct 899 TTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATAGTTTTGCCAG 958 Query 20184 TCAACGTTTTGACAAAAATTTGCATT 20209 ||| |||||| || |||||||||||| Sbjct 959 TCAGCGTTTTCACGAAAATTTGCATT 984 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || | |||||||| ||||| || ||||| || || || |||||| Sbjct 1003 ACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGACAGTGTGCGTCCATCTTCA 1062 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| |||||||||||||||| || ||| | ||||| || || | Sbjct 1063 AGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCTTCCTTATCTTGA 1122 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 |||||| ||| || | ||| | ||| ||| || ||| | ||||| || ||| Sbjct 1123 ATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCAAGAGTAATAGTCTTG 1182 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| | ||||| ||||||||||||||| Sbjct 1183 CCGGTAAGTGTTTTCACAAAAATTTGCATT 1212 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || | || | |||||| || || | ||||||||||||||||| || || || Sbjct 1439 TTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCTTTTTGTATATTATAGTCTG 1498 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || || |||||| | |||||| || ||| |||||||||| ||||| || | Sbjct 1499 ACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAG 1558 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||| || ||| ||| || || | | | | || || |||| Sbjct 1559 GAATGCCTTCTTTATCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCA 1618 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||||| |||||||| |||| ||||| |||||||||||||| Sbjct 1619 CTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 1667 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 || ||||||| |||||||| || || || ||||| || || || |||||| Sbjct 1687 ACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAGTCTGACAGTGTACGTCCATCTTCG 1746 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | || || || ||| ||||||| || || ||||| ||| | ||| ||||| || | Sbjct 1747 AGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCTGA 1806 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 |||||| || || | ||| | ||| || |||| ||||| || || || ||| Sbjct 1807 ATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTG 1866 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || |||| || || ||||||||||||||| Sbjct 1867 CCAGTCAGTGTCTTTACAAAAATTTGCATT 1896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418276313475507