Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6456 210 5e-49 seq72952 192 1e-43 seq57945 127 5e-24 seq148147 96.9 8e-15 >seq6456 Length=2491 Score = 210 bits (232), Expect = 5e-49 Identities = 185/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| |||| ||||| || || || |||||||| ||||||||||| |||||| Sbjct 2122 ATTCCACCTCTCAGCCGTAGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCA 2181 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 ||||| || | || ||||| || || |||||||||||||| || || || ||||| || Sbjct 2182 GATAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 2241 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||||||||| ||||| || |||||||| | ||||| || ||| Sbjct 2242 GGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 2301 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| |||||||| ||||| ||||| |||||||| || |||||| Sbjct 2302 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2352 Score = 205 bits (226), Expect = 2e-47 Identities = 184/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| || || ||||| | || || |||||||| || |||||||| ||||| Sbjct 982 ATTCCACCTCTCAGTCTTAGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCT 1041 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| ||||||||||| |||||||| ||||||||||| || || Sbjct 1042 GACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGG 1101 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| ||||| |||||||| |||||||| | ||||| ||| || Sbjct 1102 GGAATCCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCA 1161 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || ||||||||||| || ||||||||||| ||||| || |||||| Sbjct 1162 ACTTCAAGAGTAATAGTCTTGCCGGTAAGTGTTTTCACAAAAATTTGCATT 1212 Score = 203 bits (224), Expect = 7e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || ||||| | | |||| || || ||||||||||| || ||||||||||| Sbjct 1438 ATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCTTTTTGTATATTATAGTCT 1497 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| ||||||||||| |||||||| ||||| ||||| |||||| Sbjct 1498 GACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGA 1557 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||||||||||||||| || |||||||| | || || || ||| Sbjct 1558 GGAATGCCTTCTTTATCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCC 1617 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| |||||||| || ||||| |||||||| ||||| || ||||| Sbjct 1618 ACTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 1667 Score = 196 bits (216), Expect = 1e-44 Identities = 182/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || |||| |||||| |||||||| ||||||||||| ||||| Sbjct 1666 ATCCCACCTCTCAGACGCAGAACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAGTCT 1725 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || || |||||||||||||| || || || ||||| || Sbjct 1726 GACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 1785 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || |||||||||||||| ||||| || |||||||| | ||||| || ||| Sbjct 1786 GGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 1845 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || ||||| |||||||| ||||| ||||| |||||||| || |||||| Sbjct 1846 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 1896 Score = 188 bits (208), Expect = 2e-42 Identities = 164/204 (80%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| |||||||||||||| || || || || | ||| |||||||| ||| Sbjct 1921 TGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTCTAGCTGT 1980 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || |||||||| ||||||||||| || ||||| || |||||||| || ||||| ||| Sbjct 1981 TTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTTGTCTTGAATTTTT 2040 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || || |||||||||| ||||| || ||| || |||| |||||| || || ||||| Sbjct 2041 GCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAATTGTTTTGCCAGTC 2100 Query 104537 AGTGTTTTTACAAATATCTGCATT 104560 ||||| |||||||| || |||||| Sbjct 2101 AGTGTCTTTACAAAAATTTGCATT 2124 Score = 187 bits (206), Expect = 6e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || || || || || | |||||||||||||||||||| || |||||| Sbjct 757 CCACCTCTCAGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAT 816 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||| || ||||| ||||| || || |||||||| | ||||||||| || || || Sbjct 817 AATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGA 876 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| |||||||| ||||| || |||||||||| ||||| || |||||| Sbjct 877 ATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACT 936 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || | ||| ||||| || ||||| || ||||| || || || |||||| Sbjct 937 TCCAATGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCATT 984 Score = 187 bits (206), Expect = 6e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || ||||| | | |||| || || |||||||| || ||||||||||| ||| Sbjct 1210 ATTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCA 1269 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||||| ||||| || || ||||| ||||||||||| || ||| Sbjct 1270 GACAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGA 1329 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || |||||||| ||||| || |||||||||| ||||| || ||| Sbjct 1330 GGAATGCCTTCCTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 1389 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || | ||| ||||| || || || |||||||||||||| || |||||| Sbjct 1390 ACTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCATT 1440 Score = 118 bits (130), Expect = 2e-21 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| |||||||||||||| || || || || | ||| |||||||| ||| Sbjct 2377 TGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGTGTACGACCATCTTCTAGCTGT 2436 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAA 104471 ||||| |||||||| ||||||||||| || ||||| || |||||||| || |||| Sbjct 2437 TTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTGAA 2491 >seq72952 Length=1956 Score = 192 bits (212), Expect = 1e-43 Identities = 169/211 (80%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||||| ||||| |||||||| || ||||||||||| |||||||| || | || ||||| Sbjct 1265 TACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTC 1324 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 |||||||||||||||||||| ||||||||||| || || || || |||||||| || || Sbjct 1325 CAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 1384 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 |||||||| || || ||||| | || || |||||||||||||| || || || || Sbjct 1385 GATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATGGTTTT 1444 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| || || ||||| ||||||||| Sbjct 1445 TCCTGTAAGAGTCTTAACAAAGATCTGCATT 1475 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | |||||||| ||| || ||||||||||| || || || |||||| Sbjct 1701 ATACCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 1760 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| ||||| | ||| || || || ||||| || | |||||||| ||| Sbjct 1761 GAAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGA 1820 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || || || || || ||||||||||| | || || | |||| Sbjct 1821 GGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCT 1880 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| ||||| || || |||||||||||||| ||||| || ||||| Sbjct 1881 ACTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1930 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||| || || | || |||||||| |||||||| ||||||||||| || | ||| ||| Sbjct 1035 AGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAGATAGGGTGCGACCATCT 1094 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | ||| || |||||||| || || | |||||||| ||||| || |||||||| || Sbjct 1095 TCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCT 1154 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || || ||||||||||| | || || | |||||| |||| ||||| || Sbjct 1155 TGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGTT 1214 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||||||||||||| ||||| || ||||| Sbjct 1215 TTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||||||| | | ||| | || || || || |||||||||||||| |||||| Sbjct 333 ATACCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCA 392 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||| || || || || || ||||| |||||||| | |||||||| || Sbjct 393 GAGAGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGG 452 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || || ||||| ||||| |||||||| | || || ||||| Sbjct 453 GGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCC 512 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| ||| ||||| || || || ||||| |||||||| |||||||| Sbjct 513 ACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 562 Score = 167 bits (184), Expect = 5e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| ||||| || || ||||| ||||| | ||| ||||| | ||| || ||| Sbjct 1506 GTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAATTGCTTACCA 1565 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| |||||||| || || || ||||| || || || || |||||| Sbjct 1566 GCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTT 1625 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||||| ||||| || ||||| ||||| ||||| ||||| || ||| Sbjct 1626 ACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTCTTTCCAGTTAGGGTT 1685 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 1686 TTAACAAAAATCTGCAT 1702 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||||| | || | || || |||||||| ||||| || ||| Sbjct 561 ATACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCA 620 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | ||| ||||| | ||| || ||||||||||| || | |||||| || || Sbjct 621 GACAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGG 680 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| |||||||| || || || || ||||| || | || || |||||| Sbjct 681 GGAATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCT 740 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| ||||| || || | |||||| |||||||| ||||| Sbjct 741 ACTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 >seq57945 Length=292 Score = 127 bits (140), Expect = 5e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| ||||||||||||||||| || || || | || ||||| ||||| Sbjct 157 TGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCTTCCAGTTGC 98 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 ||||| || |||||||| || |||||||| ||||| || ||||| || || ||||||||| Sbjct 97 TTTCCGGCGAAAATTAGTCTTTGTTGATCGGGAGGAATGCCTTCCTTGTCTTGAATCTTT 38 Query 104477 GCTTTTACATTTTCTACGGTATC 104499 || ||||| || || | ||||| Sbjct 37 GCCTTTACGTTCTCGATTGTATC 15 >seq148147 Length=616 Score = 96.9 bits (106), Expect = 8e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || ||||| || |||||||||||||| | || ||| |||||| || Sbjct 614 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 555 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || | ||||| || ||||| || ||||||||||| || |||||||||||| Sbjct 554 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTTACGAAAATCTGCATTTTG 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147616694202676