Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq15400 206 2e-48 >seq15400 Length=3181 Score = 206 bits (228), Expect = 2e-48 Identities = 643/980 (66%), Gaps = 29/980 (3%) Strand=Plus/Minus Query 30220 GTGGTGGCCGGTTACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGA-CTT 30278 || |||| || ||||| ||||| |||||||| || || ||| || | || | | Sbjct 1366 GTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGT 1307 Query 30279 AGTTCCCGTCCCCAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGA 30338 | | || | || || ||||| ||| | | ||||||||| | || | ||||| || || Sbjct 1306 A-TACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGA 1248 Query 30339 TGGTATAAACGATAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTG 30398 || ||||| || |||||||| | | || || | || | ||| || || Sbjct 1247 CGGCATAAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTG 1188 Query 30399 CGCGGGTCGAGAGGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACC 30458 || || ||||| || ||||| | || |||||| |||| || | |||||||| Sbjct 1187 TAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACC 1128 Query 30459 ACAAAAAGGAGTGGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGC 30518 |||||||||| || | ||| |||| || || ||||| || ||||||||| | ||| | Sbjct 1127 ACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTC 1068 Query 30519 GATTAAAAGACACAATCCCGACCTTAC-----GATTTTACCGTCTATTGGCGGGTGGACA 30573 | ||||| ||| |||| ||| | |||| | || || ||||| |||||||| Sbjct 1067 -ACTAAAA----CAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACG 1013 Query 30574 CTTAGCGACCCTTTCTTTAAATTGAGTTCTGCCGAA---AATCGCGC-CGTTTTCGTTGA 30629 ||| ||| |||||||| || |||| | | || || | | || ||| || | Sbjct 1012 CTTGCCGATCCTTTCTTCTTTTT-AGTT--GACAAATCTAAGAGAACACGATTT-GTGCA 957 Query 30630 GTCCGCACGAGAGTATTTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGA 30689 ||| | | |||| | | | ||||||||||| || || || |||| ||||| ||||| Sbjct 956 GTCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGA 897 Query 30690 GTTTCCGGGCGGTAAAGGTGCTAATCCCGAATTAGGAGATCCAGAAAAGGATGGAGTAAC 30749 |||||| || |||||||||||||| || || | || |||||| ||||| | Sbjct 896 GTTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTG 840 Query 30750 ATATGTGCAGTTATTGAAAGAGCTCAGAGAAATGCTAAACGATCTTTC--TAAAGAAACA 30807 ||||| || ||||||| | | || ||||| | || ||||| ||||| Sbjct 839 TTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTTTCAGCTAAGAA--T 782 Query 30808 GGGAAAAAATACCAGCTCACCTCGGCGATTAGCGCGGGGTACGATAAAATCTCTATAGTT 30867 || || |||||| || | || || || |||||| | || | ||||||||| | ||| Sbjct 781 GGCAAGAAATACGAGTTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTT 722 Query 30868 AATTATGAAAATGCGCAAGAGTATCTTGATCACATTTTTGTTATGACGTACGATTTTAAA 30927 | || | || || ||| | ||| | ||||| ||||| | |||| || || || ||| Sbjct 721 GACTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAA 662 Query 30928 GGCGCTTGGTCTAACACGGACT-TGGGATATCACACTACACTTTATTCACCCTCTTGGAA 30986 || || ||||| || ||| | ||| |||| || || | || | || | ||||| Sbjct 661 GGAGCCTGGTC-AAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAA 603 Query 30987 CGCTGAAGAAAAATATACTGCCGAGTACGCGACAAAGGAGTTGTTAAAACAAAACGTCAA 31046 | | |||| || || | || | || ||| | ||||| ||| || || Sbjct 602 TCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAA 543 Query 31047 TAGTAAGAAAATAGTGCTAGCTGTTGCAATGTACGGAAGAGGGTGGACGGGTGTGCATGA 31106 | |||||| || || ||| |||||| ||||| || | || ||||| || || ||||| Sbjct 542 TCCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGA 483 Query 31107 CATAAAAAACAACAATCCCTTTACGGGTGTAGCTCAGGGGCCGATTAAAGGAACTTGGGA 31166 || |||||| |||||| || || ||| || || | ||||| |||||| | Sbjct 482 TTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCA 423 Query 31167 AAGTGGAGTTGTAGATTACA 31186 | ||||| || || |||| Sbjct 422 AGACGGAGTGGTTGACTACA 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419935114758347