Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq32352 127 1e-24 seq140233 116 2e-21 seq125672 116 2e-21 seq90516 114 7e-21 seq89288 114 7e-21 seq113655 113 2e-20 seq32329 109 3e-19 seq32354 95.1 6e-15 >seq32352 Length=721 Score = 127 bits (140), Expect = 1e-24 Identities = 83/92 (90%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 29 TAAAAAAGAAAACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 88 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||| ||||||||||||||||||||| ||| Sbjct 89 CGCTCTAACCAACTGAGCTAATGGGCCGACGA 120 >seq140233 Length=633 Score = 116 bits (128), Expect = 2e-21 Identities = 86/101 (85%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||||||| | || |||||| ||||||||||| |||||||||| ||||||||| Sbjct 102 AAATATATAGCTATTAAAAATG----TTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 47 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 46 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 6 >seq125672 Length=1085 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1085 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1026 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 1025 TGAGCTAATGGGCCGT 1010 >seq90516 Length=2926 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 60 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 61 TGAGCTAATGGGCCG 75 >seq89288 Length=1450 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 60 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 61 TGAGCTAATGGGCCG 75 >seq113655 Length=1298 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 60 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 61 TGAGCTAATGGGCC 74 >seq32329 Length=660 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| ||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 660 TGGCGCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 601 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 600 TGAGCTAATGGGCC 587 >seq32354 Length=643 Score = 95.1 bits (104), Expect = 6e-15 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 11472 CGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 23 CGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 81 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260674241593372