Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq515 132 8e-27 seq46486 116 6e-22 >seq515 Length=5297 Score = 132 bits (146), Expect = 8e-27 Identities = 192/271 (71%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | || || ||||||||||| || ||||| ||||| || ||| Sbjct 5164 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCGATC 5105 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || | || || ||||| ||| | || || || | || || |||| | Sbjct 5104 CGTCGTCTCGCCCGCAGGGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 5045 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | |||||| ||| ||| |||| ||| || || || || ||| Sbjct 5044 CGCGGAGTGCTGAAGGTGTTCCTCGAGAACGTGATCCGTGACGCCGTCACGTACACAGAG 4985 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| ||||||| |||| || || |||| || || || Sbjct 4984 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 4925 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 || | | || || || || |||||| || Sbjct 4924 CGCACTCTGTACGGCTTCGGCGGTTAATATT 4894 >seq46486 Length=3139 Score = 116 bits (128), Expect = 6e-22 Identities = 183/262 (70%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| ||||| | | | || | || ||||||||||| |||||||| |||||||| Sbjct 269 CGCTAAACGTCACAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 210 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | |||| | ||||| || || || || | || || || | || ||||| | Sbjct 209 AAGAAGATTGGCGAGACGTGGCGGCGTTAAACGCATTTCCGGTTTAATTTACGAAGAAAC 150 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||||||||||| || || | | || || ||||| | ||||| || Sbjct 149 GCGCGGAGTTTTGAAGATTTTTCTAGAAAATGTCATTAGAGATGCCGTGACTTATACTGA 90 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | || ||||| || | |||||||| || || ||||||||| | ||||| Sbjct 89 ACACGCTAAAAGGAAAACTGTTACAGCAATGGATATAGTTTACGCATTGAAAAGACAAGG 30 Query 16672 CCGTAAGATTTATGGTTTTGGA 16693 ||| | | | ||||| |||||| Sbjct 29 CCGGACGTTGTATGGATTTGGA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78840820143471