Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq4854 136 8e-28 >seq4854 Length=5253 Score = 136 bits (150), Expect = 8e-28 Identities = 350/524 (67%), Gaps = 22/524 (4%) Strand=Plus/Minus Query 4474 AAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTA-GGTTT--- 4529 ||||| || |||||||| || |||| |||| | |||||| ||| || ||||| Sbjct 1196 AAAAAAAAATATGTTATACATTATAGAAATCTTTTGCAATGTG-AGAAATATGGTTTGCG 1138 Query 4530 AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATA 4589 ||||| | ||| | || ||| || ||||| ||||| | ||| | ||| ||| Sbjct 1137 AGTTC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAAAAAAATA 1081 Query 4590 TATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTA 4649 ||| || ||| ||| || |||| |||| | || || |||||| | ||||| Sbjct 1080 TATTGAATTAAACACCCAATTACGAACTTTAGCAACATCCGACTTTGAAAAAGATTTTTA 1021 Query 4650 TAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA-AG 4708 ||| | ||||||||| | || ||||||||||| ||||| ||| | |||||| | | | Sbjct 1020 TAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATAT-CGAAAAAAGAGTAA 962 Query 4709 ATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTAT-CGGATTTAGT 4760 | || | ||| |||| | ||| ||| ||| || || || | | || | Sbjct 961 ACGTAAAGTTATTAACACACTGGAAAAATCATGGAAAAATCAAAGGTGTTCAGAGTCTCA 902 Query 4761 ATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAAC 4819 || | | || | |||||||| ||| | |||||| ||| || |||| ||| ||| Sbjct 901 TTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAGTCCAAC 842 Query 4820 TTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATT 4879 || ||| ||| | | | | || ||||| || ||| |||| ||||| |||||||| Sbjct 841 TTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAGAGA 782 Query 4880 TATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAAATA 4939 |||| || | || || ||||||||||| || | || ||| ||||| | | | || Sbjct 781 TATCAAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTACTA 725 Query 4940 CCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983 | |||||| || || ||||| || |||||||| || |||||| Sbjct 724 ACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97676154108238