Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq15400 217 1e-51 seq91968 161 8e-35 seq72952 113 4e-20 seq6456 105 6e-18 >seq15400 Length=3181 Score = 217 bits (240), Expect = 1e-51 Identities = 541/812 (67%), Gaps = 27/812 (3%) Strand=Plus/Minus Query 32249 CATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAACGATGCCCTCAAA 32308 ||| || | || || |||||||| ||||||||||| ||||| |||| || | | ||| Sbjct 1285 CATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAATGACAGCTTAAAA 1226 Query 32309 ACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGCGCAGACTTTAAG 32368 ||| |||||||| | || |||||||| || || | ||||| | ||||| || Sbjct 1225 GAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTCAAA 1166 Query 32369 GTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGCGTGTCTGCGTGG 32428 || | || ||||| || ||||| ||| |||||||||| || || || ||||| | ||| Sbjct 1165 GTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGG 1106 Query 32429 AACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTGGCAAACCCTCAC 32488 ||||| |||||||||||||||||||||||||| ||| | || || |||| | Sbjct 1105 AACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAA 1046 Query 32489 ATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCC---CTTTTATTTTATG 32545 | || ||| | || || ||||| ||||||||| | | ||||| ||| | ||| | Sbjct 1045 TTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTT 986 Query 32546 CACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTTTACAGGTTTGG 32605 || | | || | |||| ||||| | || || || |||||| | | ||| Sbjct 985 GACAAATC--TAAGAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTTTCTCCTAACATGG 929 Query 32606 AAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGGTGCCAACCCG 32665 |||||||| || || || || || ||||||||||| || || || |||||||| ||||| Sbjct 928 AAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAAAGGTGCTAACCCT 869 Query 32666 GCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTACAAGAATTGCGT 32725 | ||||||| | || || | | || | | |||| | ||||||| ||| Sbjct 868 GACCTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACGT 812 Query 32726 TCTATGCTGGACGACCTTCAATTGCAAACGGGCAAAACGTACGAGTTGACTAGCGCAATT 32785 ||||| || || ||| | | | ||||| | |||||||||||| || ||| Sbjct 811 GAGATGCTCGATGAGCTTTCAGCTAAGAATGGCAAGAAATACGAGTTGACTTCTGCTATT 752 Query 32786 AGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATG--AAGCCGCGCAAAAGTACCTCG 32843 || | || || ||||| || || | || | ||| || ||||| || | | Sbjct 751 AGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAG--GCTCAAAATTATATGG 694 Query 32844 ATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAACACCGAT----TTG 32899 || | || || | |||||||| ||||| ||||| || ||||| || ||| ||| Sbjct 693 ATCATATTTTCTTGATGAGTTATGACTTCAAAGGAGCCTGGTCAAA---TGATACTCTTG 637 Query 32900 GGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTACACCACAGAT 32959 | | |||| || | |||||||| || ||||||||| | ||| ||||| | || Sbjct 636 GAC-ATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAACTTACACATCTGAC 578 Query 32960 CACGCTGTTAAA---TTGTTAACAAGTCAAGGTGTAGCTTCTTACAAAATCATTGTCGGC 33016 || || ||| ||||| || || || || | || | || || | | || Sbjct 577 TTCGGAGTAAAATACTTGTTGGCA---CAGGGAGTGAATCCTAAGAAGATTGTATTAGGT 521 Query 33017 ATCGCCATGTACGGTCGCGGGTGGACGGGCGT 33048 | |||||||| ||||| || ||||| ||||| Sbjct 520 GTTGCCATGTATGGTCGTGGTTGGACTGGCGT 489 >seq91968 Length=4039 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 109273 GAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAGGCCGGGTTTTATTAC 109332 || ||||| || | |||| ||| ||||||| |||| |||||||| || || | ||| Sbjct 630 GACTGGCCCCGCAGCATGAAGCAGAAACCCGAGGAACTCGCCGAGGCGGGATTCTTCTAC 571 Query 109333 ACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGTTTGAAAGACTGGGAG 109392 || ||||||||||| ||||| || || || || ||||||||||| | || ||||||||| Sbjct 570 ACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGACTGGGAG 511 Query 109393 GCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGTTGCCCTTACGTGTTG 109452 ||||| | ||||||| | | ||||||||| ||||| ||||| ||| | ||||| | Sbjct 510 AACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGATGCGCCTACGTTCAG 451 Query 109453 CTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCGTG 109499 || || ||||| ||||| |||||||| || | | ||||| |||| Sbjct 450 CTGGTAAAGGGCCGAGACTATGTGCAGAAGGTGATCACGGAGGCGTG 404 >seq72952 Length=1956 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| ||||| || || ||||| |||||||| | ||| ||| || Sbjct 1702 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTAGAAGTGGAACCCTCT 1643 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | |||||| ||||| || ||||| ||| |||| ||||||| Sbjct 1642 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 1583 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||| | ||| || || ||||| ||||||| || | | ||||| ||| Sbjct 1582 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCTGATTACAAC 1523 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 ||||||||||| |||||| | || |||| || Sbjct 1522 ATTCAAAAAGAATCTACTCTTCACTTGGTATT 1491 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || |||||||| ||||| | ||| || || Sbjct 1246 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCT 1187 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | ||||| |||||| || ||||||||| | || ||||| Sbjct 1186 GACACAATTGAAAATGTAAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 1127 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || || | ||| || || ||||| ||||||| ||| | | || || || Sbjct 1126 CAACGTCTCATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTATCTGACTACAAT 1067 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || || | || |||| || | ||||||||||| Sbjct 1066 ATTCAAAAAGAATCCACCCTTCACCTGGTACTGCGTTTGCGAGGAGG 1020 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || |||||||| ||||| | ||| || || Sbjct 1930 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCT 1871 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | ||||| ||||| || ||||||||| | || ||||| Sbjct 1870 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 1811 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| |||||||| ||||| ||||||| || | | || || ||| Sbjct 1810 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 1751 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 || |||||||| |||||| | ||| Sbjct 1750 ATCCAAAAAGAATCTACTTTGCAT 1727 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||| || || || || ||||||||||| ||| | || || ||| Sbjct 1475 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCCTAGAGGTAGA-ACCAT 1417 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||||| ||| | | || || ||| || || |||||||| | ||| || | Sbjct 1416 CTGACACTATTGAAAACGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACC 1357 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | || || ||||||| ||| || |||||| | ||||||| | || | | ||||||| Sbjct 1356 AACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATA 1297 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 | |||||||| || |||||| ||||| | || ||| Sbjct 1296 ATATTCAAAAGGAATCTACTCTACATTTAGTATTG 1262 >seq6456 Length=2491 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| ||||| | ||| ||| | Sbjct 1667 ATGCAAATTTTTGTTAAAACACTGACTGGCAAAACTATTACTTTAGAAGTGGAAGCTTCT 1608 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || || ||| ||| |||||||||||| | || ||| || Sbjct 1607 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAA 1548 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||||| ||||||| ||| || |||||| | ||||||| || || | || ||||| Sbjct 1547 CAAAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTATAAT 1488 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || |||||||| |||||| | || | |||||| Sbjct 1487 ATACAAAAAGAATCTACTTTGCACTTAGTGTTG 1455 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| ||||| || || || || || ||||| | ||| ||| | Sbjct 1212 AATGCAAATTTTTGTGAAAACACTTACCGGCAAGACTATTACTCTTGAAGTTGAGCCTTC 1153 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| ||||||| ||||| ||||| | ||| || || Sbjct 1152 TGATACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGGATTCCCCCAGACCA 1093 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || ||||||| ||| || |||||| | ||||||| || || | || || || Sbjct 1092 ACAGAGGCTTATTTTTGCAGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAA 1033 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||||| || ||||| | || |||| | ||| || |||| |||| Sbjct 1032 TATTCAAAAGGAATCTACCTTGCACTTGGTACTAAGACTGAGAGGTGGAA 983 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || || || || || | ||| ||| | Sbjct 1896 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTC 1837 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || ||||||| |||||||| ||| | ||| ||||| Sbjct 1836 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 1777 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||||||||||| ||| || || || | ||||||| || || | || || || Sbjct 1776 GCAAAGACTTATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 1717 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || || ||||| ||||| | || || | || |||| || Sbjct 1716 TATTCAGAAGGAATCTACCTTACATTTAGTTCTGCGTCTGAGAGGTGG 1669 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| ||||| || || || ||||| || || | ||| ||| | Sbjct 1440 AATGCAAATTTTTGTAAAAACACTGACAGGCAAAACTATCACATTGGAAGTGGAAGCTTC 1381 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | | | | || || ||||||| || || |||||| | || || || Sbjct 1380 TGATACAATAGAAAATGTTAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCAGACCA 1321 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || || |||| || |||||||| |||||||||| || || | |||||||| Sbjct 1320 ACAGAGGCTGATTTTCGCCGGCAAACAGTTAGAAGATGGACGCACTCTGTCTGATTATAA 1261 Query 115465 CATTCAAAAAGAGTCTACT 115483 |||||||| || |||||| Sbjct 1260 TATTCAAAAGGAATCTACT 1242 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || ||||| ||||| | ||| ||| | Sbjct 2124 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACAATTACATTAGAAGTGGAAGCTTC 2065 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | | | | || || ||||||| || |||||||| | || || || Sbjct 2064 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGGATTCCTCCCGACCA 2005 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || ||||||| ||| || ||||| ||||||||| || || | |||||||| Sbjct 2004 ACAGAGGCTTATTTTTGCAGGGAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 1945 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||||| || || || ||| | || |||||||| Sbjct 1944 TATTCAGAAGGAATCAACTTTGCACTTGGTGTTG 1911 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || || || || || | ||| ||| | Sbjct 2352 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTGGAAGCTTC 2293 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || ||||||| |||||||| ||| | ||| ||||| Sbjct 2292 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 2233 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || | |||||| ||| | || || | || || Sbjct 2232 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTAT--CTGACTAC 2175 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGT 115494 || ||||| || || |||||| | || |||| Sbjct 2174 AATATTCAGAAGGAATCTACTTTGCACCTGGT 2143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424015127913640