Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq15400 179 3e-40 seq42954 127 2e-24 seq72952 95.1 1e-14 seq6456 84.2 2e-11 >seq15400 Length=3181 Score = 179 bits (198), Expect = 3e-40 Identities = 338/494 (68%), Gaps = 10/494 (2%) Strand=Plus/Minus Query 23642 CGCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGT 23701 ||||||||| || || ||||| || ||||| || |||| ||||| || | || | Sbjct 1358 CGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1299 Query 23702 GCCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAA 23761 |||||| | | ||||||||||| ||||| | || || |||||||| || || || || Sbjct 1298 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1239 Query 23762 CGACGCTCTCAAAACCGTGCCG-GGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCC 23820 ||| || |||| | | ||||||||| | || ||||| || || || |||| Sbjct 1238 TGACAG-CTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCC 1180 Query 23821 GCGCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGG 23880 | | |||||||| || || ||||||||||| |||||||| | || || || || || | Sbjct 1179 GTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAG 1120 Query 23881 GAGTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAAC 23940 || |||| | ||||||||||| || || |||||||| || || ||| || |||| Sbjct 1119 GATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAAC 1060 Query 23941 TGGCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGT 24000 || || | ||||| | || || ||||| ||||| |||||||| | ||||| | Sbjct 1059 AAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTT 1000 Query 24001 T----TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAG 24056 | || | | || | | || | || | ||| | | || || | ||| Sbjct 999 TCTTCTTTTTAGTTGACAAATCTAAGAGAACAC----GATTTGTGCAGTCAGTAAAGGAG 944 Query 24057 TTTTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGC 24116 ||| | |||| ||||||||||| || || || || || ||||||||||| || || || Sbjct 943 TTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGT 884 Query 24117 AAAGGGGCAAATCC 24130 ||||| || || || Sbjct 883 AAAGGTGCTAACCC 870 >seq42954 Length=2876 Score = 127 bits (140), Expect = 2e-24 Identities = 440/685 (64%), Gaps = 10/685 (1%) Strand=Plus/Plus Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162 || || || || ||||||||||| || | ||||| || ||||| || || | || || Sbjct 924 TTTGATGTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTC 983 Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222 ||||| || | ||||| |||||||||| || || || || | ||| || || Sbjct 984 GGCATAGGTGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGG 1043 Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282 | ||| ||||| || || || | || |||||| || ||||| | || || Sbjct 1044 ACAGTCCAGTCCCAAAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCT 1103 Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGC 145340 | ||| || || || |||||| | | ||||| ||| || |||| || | || | Sbjct 1104 TGGCTAGCTGGACTTCCTTGATATGTGCTGTA--TGCACCTTCTTTTTCTGCTAATTCAC 1161 Query 145341 AACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCG 145400 |||| || || | || || |||||||||| || ||||| || || || || | Sbjct 1162 AACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTG 1221 Query 145401 CTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTC 145460 ||| || || ||||| || || | || || ||||| | ||| || | ||||| | | Sbjct 1222 CTTTCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCCATACCCTGAACAC 1281 Query 145461 CCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGAT 145520 | | |||| || || || |||| || | | || || |||||| | Sbjct 1282 CAATACCGACAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGT 1341 Query 145521 TACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTT 145580 || || || | ||| || || || | || | ||| || || | || |||| Sbjct 1342 TAACATCAATGACTTTGTTTAAATTCTGAGTCACAATCTTAGTGATTTCTTTTAATTTTT 1401 Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 ||| | ||| ||| | ||||| | || | || | || || || || | | Sbjct 1402 TAAAATTAAATCGATTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGT 1455 Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700 | || |||||| || || | ||||||| || | ||| | ||| | |||||||| Sbjct 1456 TGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTAC 1515 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 |||| || || || ||||||| |||||||| ||||||||||| || ||||| || | || Sbjct 1516 ATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAAGCATCCTTATACAACA 1575 Query 145761 TGTACGGTCCGCCAGTCTCCACCTG 145785 | || ||| ||||||||||| || Sbjct 1576 TATATGGTGTACCAGTCTCCACTTG 1600 >seq72952 Length=1956 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| | || || || | || || || ||||||||||||||||| Sbjct 1476 CCACCACGAAGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 1535 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || | ||||| || || |||| | ||||||||| || || ||| Sbjct 1536 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1595 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| || | | || | |||||| | || || | Sbjct 1596 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1655 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || ||||| ||||| || ||||||||||| Sbjct 1656 TCTAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 >seq6456 Length=2491 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||||| ||||| || | || || ||||||||||| || ||||| | Sbjct 1213 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAGAC 1272 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || |||| ||| ||||| ||| | || | | ||| ||||| ||||| Sbjct 1273 AGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 1332 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| ||| || ||| | | || | ||||| | | || | Sbjct 1333 ATGCCTTCCTTGTC-CTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 1391 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| || || || |||||||| ||||| ||||| Sbjct 1392 TTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCAT 1439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470500311684480