Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq15400 241 1e-58 seq72952 127 2e-24 seq6456 122 9e-23 seq70052 93.3 5e-14 seq3672 91.5 2e-13 >seq15400 Length=3181 Score = 241 bits (266), Expect = 1e-58 Identities = 800/1232 (65%), Gaps = 33/1232 (3%) Strand=Plus/Minus Query 94966 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGAC 95025 ||||| ||| || || || ||||||||||| || || | | || || |||| ||| Sbjct 1369 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 1310 Query 95026 AAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGC 95085 | || || || ||||| || ||| | | || || || || ||||||||||| || Sbjct 1309 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1250 Query 95086 GACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCA 95145 ||||| || || ||||| ||||| || | ||| ||| | || | ||| || Sbjct 1249 GACGGCATAAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1190 Query 95146 TGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAA 95205 ||| |||| | || || ||||| || |||||||| | | || |||||||| Sbjct 1189 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1130 Query 95206 CCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATG 95265 || |||||||| | || || || || || ||| ||||| |||||||| | ||| Sbjct 1129 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 1070 Query 95266 GCTATTCGCAAACATAATCC-----TCATTTGAAAATT-TTGCCTAGCATCGGTGGTTGG 95319 || | || | || || | | ||||| ||| || ||| | || ||||| ||| Sbjct 1069 -----TCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCG-ATTGGTGGGTGG 1016 Query 95320 ACACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGAC 95379 || || ||| ||||||| ||||| | ||| | | ||| ||| | ||||||| | Sbjct 1015 ACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAG 956 Query 95380 TCTGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAG 95439 || || || || | | | ||||| || |||||||| ||||| ||||| |||||| Sbjct 955 TCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAG 896 Query 95440 TTTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACA 95499 ||||| || || || ||||| ||||| ||| | || | || | | ||||| | Sbjct 895 TTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGG-TAGCCCA--GAAGATGGTGATTGT 839 Query 95500 TATGTAACTCTATTGAAAGAACTACGCCTAATGCTAGACGAACTGGGTGTGGTGAACAAA 95559 ||||||| | | |||||||| |||| ||||| || || || | | || || Sbjct 838 TATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCT---TTCAGCTAAGAAT 782 Query 95560 CGCGTG---TACGAGTTGACCAGCGCCGTGGGAGCGGGCTACGATAAAATAGACGTGATA 95616 || | ||||||||||| || | | | || | |||||||| | || | Sbjct 781 GGCAAGAAATACGAGTTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTT 722 Query 95617 GATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTTAAA 95676 || ||| |||| | ||| |||||||| | || || |||||||| ||||| ||| Sbjct 721 GACTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAA 662 Query 95677 GGCGCATGGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAAC 95736 || || ||||| || | | || |||||||||||||||||||| ||| | ||||| Sbjct 661 GGAGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAAT 602 Query 95737 CCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTTAAGCAAAAAGTACCT 95796 || | || | |||||| |||||| | |||||| | || | || ||| | Sbjct 601 CCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAAT 542 Query 95797 TCCAACAAAATTGTTGTGGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGAT 95856 | || || ||||| | || || |||||||| || | || |||| ||| || || ||| Sbjct 541 CCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGAT 482 Query 95857 TACAAAAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGCACATGGGAA 95916 ||| || |||| | || || ||| ||| || || || || ||||| || ||| || Sbjct 481 TACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAA 422 Query 95917 AACGGTGTCGTCGATTATAGGCAAGTT---AACGATTTTAAAAACAGTCCAGCTTACACT 95973 |||| || || || || ||| | || || || || | || | || | | | Sbjct 421 GACGGAGTGGTTGACTACAGGGAGATTGCGAATGAAATTGCTCA-AGGCAAG-TGGGAAT 364 Query 95974 TACGCTTACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGACCAGGCGTTG 96033 | | ||||||||| || ||| | || || || || | | | ||| | | || Sbjct 363 TTC-ATTACGACAATGTCGCCCAAGCTCCTTATGTCTTCAGACCATC--AACTGG----A 311 Query 96034 GATCTGATTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACAG 96093 || || | | || ||| | | || || | | || || | || ||| | | Sbjct 310 GACCTTGTAACCTATGACAATGCTAGATCAGTTATTGAAAAGGGTAAATATGTGAGAAAT 251 Query 96094 AATAATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGATAATGGTGATTTGTTAAAC 96153 || || |||||||| | ||||| |||||||| || ||||| || |||||| | | || Sbjct 250 AACAAACTAGGTGGTCTCTTTGCTTGGGAAATCGACGCCGACAACGGTGATCTACTGAAT 191 Query 96154 GCCATGAACACAGGTCTGGGCAACAGCCCTGC 96185 |||||||||| ||||| || ||||| || || Sbjct 190 GCCATGAACATGGGTCTCGGTAACAGTCCGGC 159 >seq72952 Length=1956 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||||| ||| || ||||| ||||| ||| ||| || ||||||||||| |||| Sbjct 335 ACCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 394 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || ||||||||||||||||| || || || || || || | || Sbjct 395 GAGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGG 454 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| ||||| ||| || ||| | | | | ||||| | |||||| Sbjct 455 AATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCAC 514 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || || || |||||||||||||| ||||| Sbjct 515 TTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 562 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||| | ||| | ||||| || | ||| ||| || || ||||||||||||| Sbjct 563 ACCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGA 622 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| || | || || | ||||||||||| || ||||| ||||| ||||| | || Sbjct 623 CAAAGTGCGACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGG 682 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||||| ||| ||||| || | || | | ||||| | ||| || Sbjct 683 AATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTAC 742 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| || || |||| || || ||||| |||||||| Sbjct 743 TTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCAT 790 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || |||||||| |||||||||| ||||| || | || || | ||||||||||| || Sbjct 1512 TCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAG 1571 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || |||||||| || | ||| | || ||| ||||| |||||| ||| | | Sbjct 1572 ATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTT 1631 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || || | |||||| || | || ||||| || || ||||| || || ||| Sbjct 1632 TCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACA 1691 Query 42198 AAGATTTGCAT 42208 || || ||||| Sbjct 1692 AAAATCTGCAT 1702 >seq6456 Length=2491 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || |||| |||||| || || ||||| || |||||||||||||| ||||||| | Sbjct 1213 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAGAC 1272 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || |||| ||| || || ||||| || || | ||| ||||| | || Sbjct 1273 AGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 1332 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||||||||| ||| |||||| || | | | | || || | |||||| Sbjct 1333 ATGCCTTCCTTGTCC-TGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 1391 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | ||||| |||||||| || || || |||||||| ||||||||| Sbjct 1392 TTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCATT 1440 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | ||||| || ||||| || || ||||| ||||||||||| || | | Sbjct 1669 CCACCTCTCAGACGCAGAACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 1728 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| ||||| || || |||| ||||| || | || Sbjct 1729 AGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 1788 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||| || ||| ||| |||||| || | | | | || || | |||||| Sbjct 1789 ATGCCCTCTTTATCC-TGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 1847 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | ||||| || ||||| || || ||||||||||| ||||||||| Sbjct 1848 TTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 1896 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || || || | |||||||||||| ||||| || ||||| |||||||| ||||| | | Sbjct 1897 CCACCCCTAAGACGCAACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGAC 1956 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||||||| || || || || || || | ||| ||||||| || Sbjct 1957 AGCGTACGACCATCTTCTAGCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGA 2016 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||| | ||| |||||| || | | | | || || | |||||| Sbjct 2017 ATCCCTTCTTTGT-CTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 2075 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || || |||||||| || || ||||||||||| ||||||||| Sbjct 2076 TTCTAATGTAATTGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2124 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | || | |||| ||||| || ||||| ||||||||||| |||| Sbjct 2125 CCACCTCTCAGCCGTAGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 2184 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| ||||| || || |||| ||||| || | || Sbjct 2185 AGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 2244 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||| || ||| ||| |||||| || | | | | || || | |||||| Sbjct 2245 ATGCCCTCTTTATCC-TGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 2303 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | ||||| || ||||| || || ||||||||||| ||||||||| Sbjct 2304 TTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 2352 >seq70052 Length=3604 Score = 93.3 bits (102), Expect = 5e-14 Identities = 173/247 (70%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 14751 TACAACATTGGTTTATTTTACTATGTACTGTGGAGTATATGCAGTGGCAAGGAGTGGATG 14810 ||||| | ||||| ||||| ||||||||||||| ||||| ||| || | |||||| Sbjct 1300 TACAATAAGGGTTTGTTTTATTATGTACTGTGGAAGATATGTGATGGTAAAAAATGGATG 1241 Query 14811 GATAAAAATGTGGCTGCCCAATTCCT-GAA-ATACGTCAAA-CGTCGCATCGAAACCACA 14867 || |||||| | | ||||| ||| ||| || | ||| | |||||| | Sbjct 1240 GACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTGAGGCGTGTTACCGAAAC---A 1184 Query 14868 ACATGCAAGCTTGGACTCTCGTCTCTTCCCTTGGACCCACAAATGAATACGTCACT-CCT 14926 | |||| | |||| || | |||||||| |||||||| ||| | |||||||| ||| Sbjct 1183 AAATGCTATATTGGTCTGACCTCTCTTCCTTTGGACCCCTTAATACAAACGTCACTGCCT 1124 Query 14927 GACCGCATTATGGTATTGTGTCGACCTCTCATCCGACATATTTAAAAATGACAAAGTTAA 14986 | | || | ||||||||||| || | ||||| ||||||||||| | || | || | Sbjct 1123 G-CAGCGCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGTGTA 1065 Query 14987 TTACGCC 14993 |||| || Sbjct 1064 TTACTCC 1058 >seq3672 Length=3751 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 353 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 412 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 413 ATACTACCGAGGA 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541472162854480