Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq15400 196 5e-45 seq72952 107 2e-18 seq6456 100 3e-16 seq91968 98.7 1e-15 seq214295 86.0 6e-12 >seq15400 Length=3181 Score = 196 bits (216), Expect = 5e-45 Identities = 365/527 (69%), Gaps = 13/527 (2%) Strand=Plus/Minus Query 27983 AAACATCCCGAGAAAATTGTGGCCGCCTATTTCGTCGAGTGGGGCGTGTATCTGCGGCAG 28042 ||||||| || ||| |||||| |||||| ||||| || ||||| || |||| || | Sbjct 1380 AAACATCTGGA-AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAA 1322 Query 28043 TTTCCCGTCGACAAAGTGCCCGCGCCCAACCTGTCGCACTTGCTGTACGGTTTCGTGCCG 28102 || ||||| || | || || || || | || ||||| || || || | || Sbjct 1321 TTCCCCGTGGATCGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCC 1262 Query 28103 ATATGCGGCGGCGACGGCATAAACGACGCCCTCAAGACCGTTCCC-GGCAGTTTCGAGGC 28161 || |||||||| ||||||||||| ||| | | || | | || ||||||||| | || Sbjct 1261 ATTTGCGGCGGTGACGGCATAAATGACAGCTTAAA-AGAGATCGAAGGCAGTTTCCAAGC 1203 Query 28162 GCTGCAGCGCTCGTGCGCCGGGCGCGCCGACTTCAAGGTGACGATCCACGATCCCTGGGC 28221 ||||| || || || ||| || | |||||||| || | ||||||||||| ||||| Sbjct 1202 ACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGC 1143 Query 28222 CGCCATTCAGAAGCCGCAAAAGGGCGTCTCTACGTGGAACGAGCCGTACAAAGGCAACTT 28281 || | || || || ||||| || | ||| | ||||||||||| |||||||||||||| Sbjct 1142 AGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTT 1083 Query 28282 TGGGCAATTGATGAGCGTCAAATTAGCCAATCCGCACTTGAAGGTGCTGGCGTCGATCGG 28341 ||| ||||| ||| | ||| |||| || | |||||| | || | ||||| || Sbjct 1082 TGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGG 1023 Query 28342 CGGCTGGACGCTGTCGGACCCATTC----TTTCACATGCACGACGCGACCGTGCGCCAAA 28397 || |||||||| | || || ||| ||| | || || | | | | | | | Sbjct 1022 TGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTTG-ACAAATCTA-AGAG---AACA 968 Query 28398 CG-TTCATCGATTCCGTCGTGGACTTTCTGCTGACCTGGAAGTTCTTCGACGGCGTCGAC 28456 || || | | || || ||| ||||| || || ||||| |||||||| || || || Sbjct 967 CGATTTGTGCAGTCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGAT 908 Query 28457 ATCGATTGGGAGTTTCCGGGCGGCAAAGGAGCCAATCCCGATGTCGG 28503 ||||||||||||||||| || || ||||| || || || || |||| Sbjct 907 ATCGATTGGGAGTTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGG 861 >seq72952 Length=1956 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| ||| | || | ||| | | | ||||||||||| ||||||||||| Sbjct 792 CCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 851 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| ||| || || || || || |||| | |||| ||||| ||||| || ||||| Sbjct 852 AAAGTTCGCCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGA 911 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| ||||| || ||| | || | |||| | ||| | |||||| | | |||||| Sbjct 912 ATACCCTCTTTATC-TTGAATCTTAGCCTTTACGTTTTCAATGGTGTCAGATGGCTCCAC 970 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || || || ||||| || ||||| Sbjct 971 CTCTAGAGTTATGGTCTTTCCTGTAAGTGTCTTGACAAATATTTGCAT 1018 Score = 105 bits (116), Expect = 7e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||||||||| || | || | | | || || |||||||| |||||||| Sbjct 1020 CCTCCTCGCAAACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAG-- 1077 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 |||| |||| || || | ||| ||||| | | |||| ||||| ||||| || |||| Sbjct 1078 ATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAG 1137 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 | || ||||||||||| ||| |||| | |||| | ||| | ||||| | | || Sbjct 1138 GAATGCCTTCTTTGTC-TTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCT 1196 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | ||||| ||||| || ||||| |||||||| ||||| Sbjct 1197 ACTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| |||||||||| | || ||||||||||| || || || Sbjct 1248 CCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 1307 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || |||||||| || | | | || || | ||||||||| || || Sbjct 1308 AGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGA 1367 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| ||| ||| || | | ||| | ||||| | | || ||| Sbjct 1368 ATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACC 1427 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || ||||| || ||||| |||||||| Sbjct 1428 TCTAGGGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 1474 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || || || || | | || || |||||||||||||| || Sbjct 1476 CCACCACGAAGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAA 1535 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || | ||| ||||| | | |||| |||||||| || || || || Sbjct 1536 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 1595 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| |||||| ||||| | ||| | || || | | ||||| Sbjct 1596 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 1655 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || ||||| |||||||||||||| Sbjct 1656 TCTAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1702 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | |||||||| | | || || ||||| ||||||||||| Sbjct 1704 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 1763 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | ||| || || | | || ||||| ||||| || ||||| Sbjct 1764 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 1823 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| |||| | ||| | ||||| | | || || Sbjct 1824 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACT 1883 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| || ||||| |||||||| ||||| Sbjct 1884 TCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1930 >seq6456 Length=2491 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458 |||||||||||| || | | || ||||||||||| || || || || ||| || Sbjct 1224 ACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCC 1283 Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 || || | ||||| |||| | || || | ||||||||| ||||| || ||||| || Sbjct 1284 ATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTT 1343 Query 138519 GTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 ||| ||| |||||| |||| | ||| | || || | | ||||| || | || | Sbjct 1344 GTC-CTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGA 1402 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || ||||| |||||||||||||| ||||| Sbjct 1403 TAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCAT 1439 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458 |||||| || || || | |||| ||||| ||||| || || || || ||||| Sbjct 1908 ACGCAACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACC 1967 Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 || || || ||||| || | | | || || | ||||||||| ||||| || |||||||| Sbjct 1968 ATCTTCTAGCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATCCCTTCTTT 2027 Query 138519 GTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 ||| ||| |||||| |||| | ||| | || || | | ||||| || | || | Sbjct 2028 GTC-TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCTAATGTAA 2086 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| |||||||| || ||||||||||| ||||| Sbjct 2087 TTGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 2123 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||||| ||||||||||| | | || ||||| ||||| |||||||| | Sbjct 1669 CCACCTCTCAGACGCAGAACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 1728 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || ||||| || || || | | | || || | || || || || || Sbjct 1729 AGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 1788 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| |||||| |||| | ||| | || || | | ||||| Sbjct 1789 ATGCCCTCTTTATC-CTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 1847 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || |||||||| || ||||||||||| ||||| Sbjct 1848 TTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 1895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||||||||| |||||||| || || || || || |||||||| || | | Sbjct 1018 GATTCCTTTTGAATATTGTAGTCTGACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCA 1077 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || || | ||||||||| || || || ||||| || || ||| |||||| ||||| Sbjct 1078 AAAATAAGCCTCTGTTGGTCTGGGGGAATCCCTTCCTTATC-TTGAATTTTTGCTTTAAC 1136 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | || || | | ||| || || | || | || || || || || ||||| Sbjct 1137 ATTTTCAATTGTATCAGAAGGCTCAACTTCAAGAGTAATAGTCTTGCCGGTAAGTGTTTT 1196 Query 138600 TACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 1197 CACAAAAATTTGCAT 1211 >seq91968 Length=4039 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 124740 CGGCTTCTACTACATGGGCGTCGGCGACGAAGTGCGTTGCGCTTTCTGCAAAGTCGAAAT 124799 ||||||||| ||| ||||| ||| || ||||| || ||||| || || ||||| ||||| Sbjct 931 CGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAAT 872 Query 124800 TATGCGATGGCAGCCCGGCGACGAT-CCGCTAACGGACCACAAACGATGGGCGCCTCAGT 124858 |||| |||| | ||||||||| |||| || ||||||| |||| |||||||| |||| Sbjct 871 TATGAAATGGGTCGCGGGCGACGATCCCGCCAA-GGACCACCAACGGTGGGCGCCCCAGT 813 Query 124859 G 124859 | Sbjct 812 G 812 >seq214295 Length=239 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 |||| ||||| || |||||| ||||||| || || | ||||||||| || ||||| | Sbjct 187 AGGATGCGGTAGCCATCGAACAGGAGTTCTTAACAGACGCGCTGCCAGTACGCCTGCTAG 128 Query 52672 GCATGAAC-GCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTG 52724 |||||||| ||| || |||| | | ||||| ||||||||||| ||||| ||| Sbjct 127 GCATGAACTGCGACCTC-ATGTCCAATTACATAGAGTTTGTGGCTGATCGCCTG 75 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494672207781840