Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq15400 244 1e-59 seq42954 230 2e-55 seq6456 140 3e-28 seq72952 111 1e-19 seq57945 86.0 6e-12 >seq15400 Length=3181 Score = 244 bits (270), Expect = 1e-59 Identities = 642/970 (66%), Gaps = 25/970 (3%) Strand=Plus/Plus Query 50155 TGTAATCAACTACGCCGTCTTCCCAAGTGCCTGCCGCCGGGCCGGTGGCGATTCCCGTAA 50214 |||| ||||| || ||||||| |||||| ||| | || || || ||| | || || | Sbjct 403 TGTAGTCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGA 462 Query 50215 ACGGATTGTCGTCTTTGTAGCCGGTCACGCCGCGCCAACCCCTGCCGTACATGGCCACGC 50274 | ||| ||| ||||| ||| | ||||| |||||| | || |||||||| || | Sbjct 463 AGGGAATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACAC 522 Query 50275 CTACGATTATTTTGCTCGGCTGCACGTTTTGATCGAG-AAGAACGTTTACCGCAAAATCG 50333 ||| | || || | || | ||| || | | ||| | ||||| | || || Sbjct 523 CTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTAT-TTTACTCCGAAGTCA 581 Query 50334 GTCGTGTACTTTTCGTCGGTGTTCCATGCGGGCGCATACAAAGGCGTCTGATGTCCCAAA 50393 | ||||| |||| | || |||||||| ||||| ||||| || || |||||||| | | Sbjct 582 GATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 641 Query 50394 TCGACGGTGGACCAAGCGCCTTTAAAATCGTAACTCATTAAAAATATTTTATCTAAATAA 50453 | | ||||| || ||||| || || |||||||| || || || | ||| | |||| Sbjct 642 GTATCATTTGACCAGGCTCCTTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 701 Query 50454 TTTTGAGCGTCGCCGTAATTGACAAGGGCGATTTTATCGTAACCTGCGCTAACGGCGCTC 50513 |||||||| | |||||| | |||| ||||||||| | || | ||||| || Sbjct 702 TTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAA 761 Query 50514 GTCAATTCGAATTCGCGGCCGGTGACGCGTTGAAGATCGTCCAGCATGTCGCGCAGATCG 50573 ||||| ||| ||| ||| | | ||| || || ||||| || || | || Sbjct 762 GTCAACTCGTATTTCTTGCCATTCTTAGCTGAAAGCTCATCGAGCATCTCACGTAATTCT 821 Query 50574 CGAAGCAGCACAACGTACGTGAGT----CCGTCTTTGTGAGGATCGCCGACTGCGGGATT 50629 | || ||| ||| | | || |||| || || | |||| | || || Sbjct 822 TTCATCA----AACTTACATAACAATCACCATCTTC-TG-GGCTA-CCGAGGTCAGGGTT 874 Query 50630 GGCGCCGTTGCCGCCGGGAAACTCCCAATCGATGTCGACGCCGTCGAAAAACTTCCAAGT 50689 || || || || || ||||||||||||||||| || || || ||||| || ||||| || Sbjct 875 AGCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGT 934 Query 50690 CAGCAGAAACTCGCGTACCGATTCCACAAAAACGGCTCGTTTT-TCCGCGTCGTG-CATG 50747 || |||||||| ||| || | |||||| |||| || || | || || Sbjct 935 TAGGAGAAACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTAGATTTGTCAAC 988 Query 50748 TGAAAA----AATGGATCGGACAACGTCCATCCGCCTATAGACGGTAACACCTTGAGGTG 50803 | |||| || ||||||| | |||||| || || || || || | | ||| | | Sbjct 989 TAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTC 1048 Query 50804 CGGGTTGGCtttttttATCGCCATCAGTTGACCGAAATTTCCTTTGTACGGTTCGTTCCA 50863 ||| ||||| ||||| | ||| | ||| || || || |||||||| || |||||||| Sbjct 1049 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 1108 Query 50864 AGCCGAGACGCCCTTTTGTGGTTTCTGTACCGCAGCCCACGGGTCGTGAATGGACACTTT 50923 | || | || ||||||||||| |||| || ||||| || ||||| || || ||||| Sbjct 1109 TGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 1168 Query 50924 AAAATCGGCTCGGCCGGCGCACGAACGCTGCAGCGCCTCGAAACTGCCCGTGACGGTTTT 50983 || || | |||||| || || || ||||| || | ||||||||| || ||| Sbjct 1169 GAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTT 1228 Query 50984 CAACGCGTCGTTGACGCCTTCGCCGCCGCAAATCGGCACGAAACCGTACAGCAAATGCGA 51043 || ||| || | ||| || ||||||||||| || | || || || |||||||| | Sbjct 1229 TAAGCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGT 1288 Query 51044 CAAATTGGGGGCAGGAATTTTGTCAGCGGCGAACGCACGCGCGTACACTCCCCATTCTAC 51103 | ||| || ||| || || ||| ||| | | || || ||||||||||| Sbjct 1289 AAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTAC 1348 Query 51104 AAAATACGCG 51113 || || ||| Sbjct 1349 GAAGTAGGCG 1358 >seq42954 Length=2876 Score = 230 bits (254), Expect = 2e-55 Identities = 664/1019 (65%), Gaps = 6/1019 (1%) Strand=Plus/Minus Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGG 123372 |||| || ||||| | || | | || || ||| |||||||| |||| || || Sbjct 1887 TAGAGCCTTGGCATGCGGACATATTTGAGTTCTTAGATTTAAAAAAGAACACAGGTAAGG 1828 Query 123373 AAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGAC 123432 |||||| || ||| | || |||| || ||||||||| |||| ||| |||||||| | Sbjct 1827 AAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAA 1768 Query 123433 GCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCG 123492 | ||| || | || | | ||| ||||||||||| || ||||| ||| | | Sbjct 1767 GGGTAGAAAAGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTCGCTG 1708 Query 123493 ACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGG 123552 || |||||| | | || || | | || || |||| || |||| |||| | Sbjct 1707 ACTGTTACGGAGAGGAATTCGAAGCACTATATGCCAAATATGAA---GAAGAAAAACGGT 1651 Query 123553 TTAGTCA--GGTTCCG-GCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAA 123609 ||| | | || | || | || || | || | ||||| ||| | ||||| || | Sbjct 1650 TTATAAAACGAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCTCAAGTGGAGA 1591 Query 123610 CCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACT 123669 | || || || || ||| | || || || || ||||||||||| | ||||| | || Sbjct 1590 CTGGTACACCATATATGTTGTATAAGGATGCTTGCAACAGGAAGAGTAATCAAAAAAATC 1531 Query 123670 TGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATC 123729 | || || || |||||||| ||||||||| | || || | |||||| | ||| Sbjct 1530 TTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATG 1471 Query 123730 AAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAACGGCGCTT 123789 ||||||| ||||| || | ||||| || | || | || ||||| | Sbjct 1470 AAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGTTGAAAATAATCGAT 1411 Query 123790 TTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAAATTA 123849 ||||||| ||| | ||| || || || | ||| ||||||| |||||| | | Sbjct 1410 TTAATTTTAAAAAATTAAAAGAAATCACTAAGATTGTGACTCAGAATTTAAACAAAGTCA 1351 Query 123850 TCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGG 123909 | |||||||| ||||||||| | ||||| || ||| ||| ||| | || | Sbjct 1350 TTGATGTTAACTTTTATCCTGTCCCTGAAGCAAAAACTTCAAATATGAGGCACCGTCCTG 1291 Query 123910 TCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAA 123969 |||| | || |||| || |||| || | ||||| || || | || || ||||||| Sbjct 1290 TCGGTATTGGTGTTCAGGGTATGGCAGATACATTTGTGTTGATGAGAATACCTTACGAAA 1231 Query 123970 GCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGG 124029 | || |||||| | |||||| |||||| |||||||||||||| || || || | Sbjct 1230 GTGAGAAAGCAATACTCCTTAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAG 1171 Query 124030 AGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGG 124089 | || || || ||| | || ||| | || || ||| | || || || || | Sbjct 1170 AAGCTAGTTGTGAATTAGCAGAAAAAGAAGGTGCATACAGCACATATCAAGGAAGTCCAG 1111 Query 124090 CGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACT 124149 | |||| |||||| | ||||| || |||||||| || || ||| | | ||||||| Sbjct 1110 CTAGCCAAGGTATCCTCCAGTATGATATGTGGAACAAAACTCCTACAGACCTTTGGGACT 1051 Query 124150 GGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGT 124209 ||| || | ||| || ||| | | || |||||||| || || || ||| | || Sbjct 1050 GGACTGTCCTCAAAGAAAAGATAGCAAAACATGGTTTGCGCAATTCTCTATTGATAGCAC 991 Query 124210 ACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCA 124269 |||||||| || | ||||| |||||| | || |||| ||||| || || || || | Sbjct 990 CTATGCCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCATTTA 931 Query 124270 CTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCAT 124328 | ||| | ||| || |||| ||| | || || |||| || | || |||||| Sbjct 930 CATCAAATATTTACCAAAGAAGAGTCTTATCTGGAGAATTTCCTGTAGTGAACCATCAT 872 >seq6456 Length=2491 Score = 140 bits (154), Expect = 3e-28 Identities = 172/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | |||||||| |||| || ||||| ||||| |||||||| || Sbjct 1438 ATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCTTTTTGTATATTATAGTC- 1496 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| || | | ||| || | |||||||||||| | || | | ||| ||||| | Sbjct 1497 -TGACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGGTCAG 1555 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||||||||||||||| ||||| ||| || | ||| | ||||| |||| | Sbjct 1556 GAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTT 1615 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | ||||| | ||||| |||||||| || || ||||| ||||||||||||||| Sbjct 1616 CCACTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCATC 1668 Score = 131 bits (144), Expect = 2e-25 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 |||| || ||||||||||| ||||| || || |||| || | | ||| || | || Sbjct 1009 TGCAAGGTAGATTCCTTTTGAATATTGTAGTC--TGACAGTGTGCGTCCATCTTCAAGTT 1066 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 |||||||||| | || | | || ||||| || ||||| ||||| ||||||||||||| Sbjct 1067 GTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCTTCCTTATCTTGAATTT 1126 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 || ||| | ||| | || || |||| ||| ||||| ||||||| || ||||||| Sbjct 1127 TTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCAAGAGTAATAGTCTTGCCGG 1186 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| |||||||||||||| Sbjct 1187 TAAGTGTTTTCACAAAAATTTGCAT 1211 Score = 125 bits (138), Expect = 6e-24 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | |||||| | |||| ||||||||||| || ||||||||||| Sbjct 1894 ATTCCACCCCTAAGACGCAACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATC- 1952 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| | | || ||| || | ||||| ||||| | || | | || ||||| | Sbjct 1953 -TGACAGCGTACGACCATCTTCTAGCTGTTTCCCTGCAAAAATAAGCCTCTGTTGGTCGG 2011 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| |||||||| |||||||||||| || | ||||| || || |||| | Sbjct 2012 GAGGAATCCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTT 2071 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | |||| |||||||| || || || ||||||||||||||||| Sbjct 2072 CCACTTCTAATGTAATTGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 2123 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | ||| |||| |||| || ||||||||||| ||||||||||| Sbjct 1210 ATTCCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCA 1269 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || || ||||| || ||| | |||| | || ||||| | Sbjct 1270 --GACAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTG 1327 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||||||||| || || ||||||||| || | ||||| || || |||| | Sbjct 1328 GAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTT 1387 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | || | |||||||| || || |||||||||||||||||||| Sbjct 1388 CCACTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCAT 1439 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| ||| | || |||||||| || ||||| || || |||| || | | ||| | Sbjct 1687 ACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAGTC--TGACAGTGTACGTCCATCTT 1744 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | || ||||| || | || | || |||||| || || |||||||| |||||||| | Sbjct 1745 CGAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCT 1804 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||||||| || | ||| | || || |||| || ||||| || || | || | Sbjct 1805 GAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCT 1864 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || || || ||||||||||||||||| Sbjct 1865 TGCCAGTCAGTGTCTTTACAAAAATTTGCAT 1895 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || ||||| || || ||||| ||||| | ||| ||| || Sbjct 775 ACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCA 834 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || || | ||||| | || ||||| || |||||||||||||| || ||| Sbjct 835 AGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCTTCTTTGTCCTGA 894 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| || | ||||| || || |||| || ||||| | || | |||||| Sbjct 895 ATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTGATAGTTTTG 954 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| || ||||||||||| Sbjct 955 CCAGTCAGCGTTTTCACGAAAATTTGCAT 983 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | |||| | || || |||| || |||||||| || ||||| || || Sbjct 2122 ATTCCACCTCTCAGCCGTAGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCA 2181 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 || || | | ||| || | || ||||| || | || | || |||||| || | Sbjct 2182 --GATAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 2239 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | |||||||| |||||||| ||||||||| || | ||| | || || |||| | Sbjct 2240 GGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTT 2299 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || || | || ||||| || || || ||||||||||||||||| Sbjct 2300 CCACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 2351 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/144 (74%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | |||||| | |||| ||||||||||| || |||||||||| Sbjct 2350 ATTCCACCCCTAAGGCGCAACACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAAT-- 2407 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||||| || | || ||| || | ||||||||||| | || | | || ||||| | Sbjct 2408 CTGACAGTGTACGACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGG 2467 Query 45229 GCGGAATGCCTTCTTTATCTTGAA 45252 | ||||| |||||||| ||||||| Sbjct 2468 GAGGAATACCTTCTTTGTCTTGAA 2491 >seq72952 Length=1956 Score = 111 bits (122), Expect = 1e-19 Identities = 159/222 (72%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 |||| ||||| || ||||| |||||||| || || || || || | || ||| | Sbjct 1722 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA--GAAAGTGTACGACCATCTT 1779 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 ||||||| || || ||| | || | ||||| || || || |||||||||||||| |||| Sbjct 1780 CCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTT 1839 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 | ||||| || | ||| | ||||| || | || ||||| | ||||| |||| Sbjct 1840 GGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGTTT 1899 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACCAA 45351 | || || || ||||| |||||||||||||| ||| || || Sbjct 1900 TTCCAGTAAGTGTTTTAACAAAAATTTGCATACCGCCACGAA 1941 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | | || || || || || || ||||| ||||| ||||| || || Sbjct 1017 ATACCTCCTCGCAAACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCA 1076 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| |||||||| || || || | || | ||||| || || || Sbjct 1077 GATAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGA 1136 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||| ||||||||||| || | ||| | ||||| || | || Sbjct 1137 GGAATGCCTTCTTTGTCTTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCT 1196 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| ||||| || || || ||||| |||||||||||||| Sbjct 1197 ACTTCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1246 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | ||| |||| ||| || || ||||||||||| |||||||||| Sbjct 1245 ATACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAAT-- 1302 Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 | || || | | ||| |||| ||||||||| || | || | | || ||||| | Sbjct 1303 CAGATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTG 1362 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| |||||||| ||||| || ||| || | ||| | ||||| || | | Sbjct 1363 GGGGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTT 1422 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || || | ||||| || || ||||| || ||||| || ||||| Sbjct 1423 CTACCTCTAGGGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 1474 >seq57945 Length=292 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||| |||||||||||| || | ||||| || || |||| || Sbjct 292 GGAATACCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 233 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | |||| ||||||||| || || || ||||||||||||||||| Sbjct 232 ACTTCCAATGTAATCGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 183 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/149 (73%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | || | |||||| | |||| || |||||||| || |||||||| || Sbjct 184 ATTCCACCCCTAAGACGCAACACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTC- 126 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| || | | ||| |||| ||| ||||| ||| | || | || ||| || || | Sbjct 125 -TGACAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCGG 67 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTT 45257 | ||||||||||| || |||||||| ||| Sbjct 66 GAGGAATGCCTTCCTTGTCTTGAATCTTT 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450554829196120