Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq72952 143 6e-29 seq6456 131 4e-25 >seq72952 Length=1956 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||||||||||| ||||||||| | ||||| | |||||| Sbjct 807 AGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAAGTTCGCCCATCT 866 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||||||||| || || || ||| ||| || ||| || Sbjct 867 TCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGAATACCCTCTTTATCT 926 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| ||| | |||||| | || || || || | || || ||| Sbjct 927 TGAATCTTAGCCTTTACGTTTTCAATGGTGTCAGATGGCTCCACCTCTAGAGTTATGGTC 986 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||| Sbjct 987 TTTCCTGTAAGTGTCTTGACAAATATTTG 1015 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || ||||| || |||| ||||| |||| |||||| | |||||| Sbjct 579 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGACAAAGTGCGACCATCT 638 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| || || || ||||||||||| ||||| || ||| ||||| ||| Sbjct 639 TCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGAATGCCTTCCTTATCC 698 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || |||||| |||| ||||| | || |||||| |||| || || ||| Sbjct 699 TGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTC 758 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||||||||||| ||||| Sbjct 759 TTTCCTGTTAATGTTTTCACAAATATTTG 787 Score = 113 bits (124), Expect = 1e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || ||||| || || || || ||||| | |||||||||| | || | ||||| Sbjct 1034 CAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAGATAGGGTGCGACCATC 1093 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||| ||||| || || ||||||||||| || || || ||| ||| |||||| || Sbjct 1094 TTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTC 1153 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| || ||| || ||| | ||||| | | |||||| || || || || || Sbjct 1154 TTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGT 1213 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||||||||| Sbjct 1214 TTTTCCAGTAAGTGTTTTAACAAAAATTTG 1243 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || ||||| || |||||||| | || || |||| | || Sbjct 1254 CGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTA 1313 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| || ||||| || || || || | ||| ||||| || ||| ||| Sbjct 1314 CGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCT 1373 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || |||||| ||||||| ||| | ||||| | || |||||| || | Sbjct 1374 TCTTTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTACCTCTAGG 1433 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || ||||| || ||||| || || Sbjct 1434 GTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTG 1471 Score = 104 bits (114), Expect = 5e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || || ||||||| ||||||||||| | || | |||||||||| ||||| || Sbjct 1733 AGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCC 1792 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||| || ||||| || || || ||| ||| |||||| || || || || ||| Sbjct 1793 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTT 1852 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | ||||| | | |||||| || || || || || || || || || || Sbjct 1853 TACATTTTCAATTGTGTCAGAGGCTTCTACTTCTAAAGTAATTGTTTTTCCAGTAAGTGT 1912 Query 199612 TTTCACAAAAATTTG 199626 ||| ||||||||||| Sbjct 1913 TTTAACAAAAATTTG 1927 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| ||||| || || | |||||||||| | ||| | ||||| |||||||| Sbjct 359 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCCAGCTG 418 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || ||||| || ||||| || || || || ||| || ||| || || ||||| Sbjct 419 CTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 478 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||| | ||||||| | ||| || || || ||||| || || || || Sbjct 479 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTTTTCCCTGT 538 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||| || || ||||| || || Sbjct 539 GAGTGTCTTTACAAAGATCTG 559 Score = 87.8 bits (96), Expect = 4e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || ||||| | |||||| |||| | ||| | |||||||||| || Sbjct 1499 GTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAATTG 1558 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || ||||| ||||||||||| || || || || ||| || || || || Sbjct 1559 CTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGAT-TT 1617 Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | || || || ||| | || || | | ||| || || | || || ||||| || | Sbjct 1618 TAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCTAGAGTAATGGTCTTTCCAG 1677 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 | || ||||| |||||||| || Sbjct 1678 TTAGGGTTTTAACAAAAATCTG 1699 >seq6456 Length=2491 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || |||||||||||||| || || || || | ||||| |||| || || | | Sbjct 766 AGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGT 825 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || ||||| ||||| || || | | ||| ||||| || ||| |||||| Sbjct 826 CCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCTTCT 885 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| ||| ||| || ||| | || || | | |||||| ||||| ||| Sbjct 886 TTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTACTTCCAATGTG 945 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| |||||||| Sbjct 946 ATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTG 980 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| || |||||||| | || || |||| || ||| | ||||||||| | ||| Sbjct 1236 GTGCAAAGTAGATTCCTTTTGAATATTATAATCAGACAGAGTGCGTCCATCTTCTAACTG 1295 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || |||||||| || || | ||| ||||| ||| ||| ||||| |||||||| || Sbjct 1296 TTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATTTT 1355 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| || ||| | || || | | ||| || ||||| ||||| || || || || Sbjct 1356 TGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCTGT 1415 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||||||||| Sbjct 1416 CAGTGTTTTTACAAAAATTTG 1436 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | ||| || ||||| || | |||||||||| | || | ||||||| Sbjct 2140 AGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTACGTCCATCT 2199 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || || || || | ||||| || || ||| || ||| ||| Sbjct 2200 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCC 2259 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| ||| ||| || ||| | || || | | ||| || |||| ||||| ||| Sbjct 2260 TGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTC 2319 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||||||||| Sbjct 2320 TTGCCAGTCAGTGTCTTTACAAAAATTTG 2348 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| || || ||||| | || ||||| | || || | ||||||||| || || Sbjct 1464 GTGCAAAGTAGATTCTTTTTGTATATTATAGTCTGACAGTGTGCGTCCATCTTCAAGTTG 1523 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||| || || || || | || ||||| ||| ||| |||||| ||||||||||| Sbjct 1524 TTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTT 1583 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| || ||||| ||||| | | ||| || || || || || || || || || Sbjct 1584 TGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAAGTAATAGTTTTGCCAGT 1643 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||||||||| Sbjct 1644 CAGTGTTTTAACAAAAATTTG 1664 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || ||||| || | |||||||| | || || | ||||||||| ||||||||||| Sbjct 1699 GTAGATTCCTTCTGAATATTGTAGTCTGACAGTGTACGTCCATCTTCGAGCTGCTTTCCA 1758 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 || || || || | ||||| || || ||| || ||| |||||||| ||| ||| Sbjct 1759 GCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTA 1818 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || ||| | || || | | ||| || |||| ||||| ||||| || || || || Sbjct 1819 ACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTC 1878 Query 199613 TTCACAAAAATTTG 199626 || ||||||||||| Sbjct 1879 TTTACAAAAATTTG 1892 Score = 95.1 bits (104), Expect = 3e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| || || | ||| | || || |||||||| | |||||||| | || || | | Sbjct 994 AGTCTTAGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGACAGTGTGCGT 1053 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || || ||||| || || || || | ||| ||||| || ||| ||||| Sbjct 1054 CCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCTTCC 1113 Query 199532 CGCTCCTGAATCTTTTGCTTCA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || ||||| |||||||| | | ||| | || || | | || || || | || Sbjct 1114 TTATCTTGAAT-TTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCAAGAGT 1172 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || ||||||||||||||||| Sbjct 1173 AATAGTCTTGCCGGTAAGTGTTTTCACAAAAATTTG 1208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175049495740249