Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq15400 178 1e-39 seq6456 118 1e-21 seq72952 95.1 1e-14 >seq15400 Length=3181 Score = 178 bits (196), Expect = 1e-39 Identities = 792/1239 (64%), Gaps = 64/1239 (5%) Strand=Plus/Minus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| || || || |||||||||||||| || | | ||||| || | ||| Sbjct 1369 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 1310 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || || | | ||||| ||||| ||||||||||| || Sbjct 1309 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1250 Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913 ||||| ||||| ||||| ||||| | | || ||| | | | ||| || Sbjct 1249 GACGGCATAAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1190 Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973 || | || || ||||| || ||||||||| | | || |||| ||| Sbjct 1189 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1130 Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031 |||||| | || ||||| | | |||||||| ||| ||||| || || || | | Sbjct 1129 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAA 1072 Query 99032 TGGCCATACGTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088 || | || ||||| | ||| | | || || || ||| || ||||| |||| Sbjct 1071 TGTCACTA---AAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGA 1015 Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148 | ||| ||| || |||| ||||| | || | | ||| | | | || || | | Sbjct 1014 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 955 Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208 | || || || || | |||||||| ||||| |||||||| ||||| ||||||| Sbjct 954 CAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGT 895 Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268 ||||||| || || || || |||||||| | || | || || || || | || Sbjct 894 TTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGTT 838 Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTG---GGTGTG---GCCA 99322 |||| | | || |||| | ||| |||||| || || | | | | | || Sbjct 837 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTTTCAGCTAAGAATGGCA 778 Query 99323 ATAAACGTGTTTACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGG 99382 | ||| ||||| |||| ||| | || | || | ||||||||| | || | Sbjct 777 AGAAA------TACGAGTTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTG 724 Query 99383 TCGATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACGA 99437 | || |||| || || |||| ||| |||| ||| | || || |||||||| || Sbjct 723 TTGA-----CTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGA 669 Query 99438 TTTTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCAT 99496 || ||||| |||||||| || ||| | || ||||||||||||||||| || || Sbjct 668 CTTCAAAGGAGCCTGGTCAAATGAT-ACTCTTGGACATCAAACACCATTGTACGCGCCTG 610 Query 99497 CGTGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAA 99556 | ||||| || | || | |||||| | || | | || ||| | | || | Sbjct 609 CATGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGG 550 Query 99557 AAGTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAG 99616 |||| | || | ||||||||| | || || |||||||| || | || |||| ||| | Sbjct 549 GAGTGAATCCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCG 490 Query 99617 TGCATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCA 99676 | ||||| ||| || | || | || || || || || ||||| || ||||| | Sbjct 489 TTCATGATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTA 430 Query 99677 CCTGGGAAAACGGTGTTGTTGATTATAGGCAGGT--CGAA-GA----GCTCAA---AAAC 99726 | ||| || |||| || ||||| || ||| || | |||| || |||||| || Sbjct 429 CTTGGCAAGACGGAGTGGTTGACTACAGGGAGATTGCGAATGAAATTGCTCAAGGCAAGT 370 Query 99727 AACAATTACACATACGCATACGACAAAGTGGCCGAGGCGGCATATATTTACGGTGGCGCC 99786 |||| || |||||||| || ||| | || | ||| | | | | | | Sbjct 369 GGGAATTTCA-------TTACGACAATGTCGCCCAAGCTCCTTATGTCTTCAG-ACCATC 318 Query 99787 GAC--CAGGCGTTGAATTTAATTTCTTACGACGACTCATCGTCTGTACTAGCAAAAGGTA 99844 || || | ||| ||| | || ||| | | || || | | ||| |||| Sbjct 317 AACTGGAGACCTTG----TAA---CCTATGACAATGCTAGATCAGTTATTGAAAAGGGTA 265 Query 99845 ATTACGTTTTACAAAACAATCTCGGAGGTTTATTTGCTTGGGAAATCGATGCCGACAACG 99904 | || || | | ||||| || || ||| | ||||||||||||||||| |||||||||| Sbjct 264 AATATGTGAGAAATAACAAACTAGGTGGTCTCTTTGCTTGGGAAATCGACGCCGACAACG 205 Query 99905 GTGACTTGTTAAACGCCATGAACACAGGTTTGGGTAACA 99943 |||| | | || |||||||||| ||| | ||||||| Sbjct 204 GTGATCTACTGAATGCCATGAACATGGGTCTCGGTAACA 166 >seq6456 Length=2491 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || |||| |||||| || | ||||| ||| |||||||| ||||| || || || Sbjct 1213 CCACCCCTTAGACGCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCAGAC 1272 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| | || || | ||| ||||||||||| |||| | ||| ||||| | || Sbjct 1273 AGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 1332 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| || || ||| | | | | || || | |||||| Sbjct 1333 ATGCCTTCCTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 1392 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| ||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct 1393 TCCAATGTGATAGTTTTGCCTGTCAGTGTTTTTACAAAAATTTGCATT 1440 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || |||| ||||||||| | ||||| ||| || ||||| ||||| ||||| || Sbjct 1441 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCTTTTTGTATATTATAGTCTGAC 1500 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || || || || || || || || | | || ||||| | || Sbjct 1501 AGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGAGGA 1560 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || || ||| ||||| ||| | | | | ||||| | |||||| Sbjct 1561 ATGCCTTCTTTATCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACT 1620 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || |||||||| ||||| ||||||||||| |||||||| Sbjct 1621 TCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTGCAT 1667 >seq72952 Length=1956 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||||| ||| || |||| ||||| || ||| || || ||||||||||| || Sbjct 336 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 395 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || |||||||| || ||||| || | || || || || | || Sbjct 396 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 455 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| |||||| || | | | | ||||| | |||||| Sbjct 456 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACT 515 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| ||||| || || || || || |||||||| ||||| Sbjct 516 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 562 Score = 86.0 bits (94), Expect = 7e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||||||| | || | |||||| ||| || |||||||| |||||||| || Sbjct 1704 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 1763 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || | |||||||| ||||| || | || || || || | || Sbjct 1764 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 1823 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || ||||| ||| || ||| | | | | ||||| | ||| || Sbjct 1824 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTACT 1883 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || ||||| || || || ||||||||||| |||||||| Sbjct 1884 TCTAAAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCAT 1930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563427185398440