Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq15400 143 3e-29 seq12094 132 5e-26 seq72952 122 9e-23 seq6456 109 5e-19 seq1691 104 2e-17 seq188143 98.7 1e-15 seq157178 93.3 4e-14 >seq15400 Length=3181 Score = 143 bits (158), Expect = 3e-29 Identities = 256/374 (68%), Gaps = 0/374 (0%) Strand=Plus/Plus Query 62341 AACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCAGGTGCGGGTGCGCT 62400 || ||||||| || ||||| || || || ||||| || | || | ||| | ||| Sbjct 999 AAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCT 1058 Query 62401 TTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGCTCCACGCGGTCACG 62460 | || | | ||| | ||||| |||||||| ||||| |||||| |||| | | || Sbjct 1059 TGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAAT 1118 Query 62461 CCCTTTTGCGGCTTTTGCACGGCCGCCCACGGGTCGTGCACCGCCAGTTTGAAGTCGTCG 62520 || ||||| || ||||| | || ||||| || ||||| | | | ||||||||| || Sbjct 1119 CCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCA 1178 Query 62521 CGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGGACTTGAGGCTGTCG 62580 ||||| || || || ||||| || | ||| ||||| |||| || | |||||| Sbjct 1179 CGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTCA 1238 Query 62581 TTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGATGCGTGAGGTTGGGC 62640 || |||||||| |||||||| || || | ||||| || |||| ||| || || || || Sbjct 1239 TTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGT 1298 Query 62641 ACGGGCACCTTGTCGGCGGGAAACTCGCGTCCGTACACGCCCCACTCGACGAAATAGGCG 62700 | || | || |||| || | | || || ||||| || ||||| |||||| Sbjct 1299 ATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCG 1358 Query 62701 CCCACCACCTTGCC 62714 ||||| || || || Sbjct 1359 CCCACAACTTTTCC 1372 >seq12094 Length=2216 Score = 132 bits (146), Expect = 5e-26 Identities = 144/190 (76%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| ||||| ||||| ||||| ||||||||||| || |||||||| | ||| ||||||| Sbjct 430 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTT 371 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | | ||||||||| | || || ||||| || || || | ||||| || ||||| |||| Sbjct 370 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAG 311 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 | | | || || || || ||||| |||||| ||||||| | | |||||| || | Sbjct 310 CGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 251 Query 133097 CCTT-TTCTT 133105 |||| ||||| Sbjct 250 CCTTCTTCTT 241 >seq72952 Length=1956 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || || ||||| || || | || || || ||| | Sbjct 1930 ATGCAAATTTTTGTTAAAACACTTACTGGAAAAACAATTACTTTAGAAGTAGAAGCCTCT 1871 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||||||| |||||||| || ||||| | || ||| Sbjct 1870 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 1811 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || |||| ||||||||| || |||| || | || || || ||||||||| Sbjct 1810 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 1751 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||| | || ||||||| || || ||||| ||||| || Sbjct 1750 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 1704 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || ||||| || ||||| || ||||| ||||| | || || || || | Sbjct 562 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 503 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| |||||| || |||| ||||||||||| |||||| | || ||| Sbjct 502 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 443 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || |||| ||| || || |||||||| || | || || ||| |||||||| Sbjct 442 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 383 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || || || | || |||| ||||| | ||| | ||||| || Sbjct 382 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTCTAAGAGGAGG 336 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || || || || || || ||||| || | || || ||| | | Sbjct 1018 ATGCAAATATTTGTCAAGACACTTACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 959 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | ||||| | || | || || | || |||||||| ||||| | || || Sbjct 958 GACACCATTGAAAACG-TAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCA 900 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||| | || ||||| |||||||| || | ||| || | |||||||| Sbjct 899 ACAACGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGGCGAACTTTATCGGACTACAA 840 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || ||| | || || ||| || |||| || Sbjct 839 CATCCAAAAGGAGTCTACCCTTCATCTTGTACTACGTCTGCGAGGTGG 792 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || |||||||||||| | || || || | | Sbjct 1475 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACCCTAGAGGTAGAACCATC 1416 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| || ||||| | || | ||| |||| |||||||| || |||||| | |||| Sbjct 1415 TGACACTATTGAAAACG-TGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACC 1357 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| |||| |||| || || ||||| ||||| || | || || || || || | Sbjct 1356 AACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATA 1297 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | || ||||||||| | || || ||||| || ||||| Sbjct 1296 ATATTCAAAAGGAATCTACTCTACATTTAGTATTGCGT 1259 >seq6456 Length=2491 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || ||||| || || || |||||||| || || | || || || || | Sbjct 2124 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACAATTACATTAGAAGTGGAAGCTTC 2065 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| |||| | |||||| | |||||||| || ||||| ||||||| Sbjct 2064 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGGATTCCTCCCGACCA 2005 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| |||| |||| || || |||||||| || || | || || || || || || Sbjct 2004 ACAGAGGCTTATTTTTGCAGGGAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 1945 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| | || |||| |||||| ||||| | || || || Sbjct 1944 TATTCAGAAGGAATCAACTTTGCACTTGGTGTTGCGTCTTAGGGGTGG 1897 >seq1691 Length=4586 Score = 104 bits (114), Expect = 2e-17 Identities = 171/247 (69%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 126654 GGGCAACCGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCC 126713 ||||| ||| | |||||||||||| | || ||||||||| ||| ||||||| || Sbjct 1861 GGGCACGCGGTGTGGTTGGCCGGGTGCGCACCCCCGCAGTTGACGCAGGTAGCCGCTGCT 1802 Query 126714 TCACGGGGGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGC 126773 ||| | || || |||| |||| ||| || | ||||| | ||||||||| || Sbjct 1801 TCAAGCGGCCGCGGGCAGTCGCGGGCGAGGTGCTCCTCCCCGCACCTCACACAGGCCAGG 1742 Query 126774 GGTCGGTGACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGG 126833 | ||||| || ||||| ||| || || |||||||||||||| ||||||||| Sbjct 1741 CGGCGGTGGCACCCGTGGCTTGAGTGCCGGAACGCCTGGCAGCGATGACACTGCGCGGGG 1682 Query 126834 CGGCGCTTGCCGCGCCACGCCTCAATGATGACGCCGGTGATGCCAAGCAATTCCGTCACT 126893 | ||||| |||||| || || || ||| || | ||| || |||||||| | Sbjct 1681 CCCTTCTTGCTGCGCCATGCTTCGATTTTGATACCCGGCATGTTGAGTAATTCCGTGAGG 1622 Query 126894 TGGTATA 126900 ||| ||| Sbjct 1621 TGGAATA 1615 >seq188143 Length=771 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATAC 133441 |||| || | ||| || || || | ||||||||||| || || |||||||||||||| Sbjct 479 CCTTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTGTACATCT 538 Query 133442 TCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501 ||| ||||| | |||||| || || || || || || || | |||||||| | ||||| Sbjct 539 GCCATATGTCTGGATATTGAATTGGGAATATAACGAATCGTCTAGGGTTTTCTCTCAACA 598 Query 133502 GCGGCTCCGCTTGGGGGTCGAACG 133525 | ||||| ||| ||||| |||| Sbjct 599 GAGGCTCAAGTTGTGGGTCAAACG 622 >seq157178 Length=885 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/157 (74%), Gaps = 9/157 (6%) Strand=Plus/Plus Query 132550 TAAAAGTCCGCATCCAAAGTAAAGGTGTCGTCC-----TTG-GCAAACATCACGCCAAAT 132603 ||||| || ||||| |||||||| | |||| ||| || |||||| || | Sbjct 445 TAAAATTCTGCATCTAAAGTAAACACATTGTCCATAGGTTGCGC---CATCACTCCCCAC 501 Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 ||||| ||||| || || || |||||||| || || ||||| || ||||| || ||||| Sbjct 502 TTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAGA 561 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCT 132700 |||||||||| || || || |||||||||||||| Sbjct 562 TTCATAAAATCGAATGGATTCTGTGTGTTGTAGTGCT 598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498570077540480