Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq72952 100 2e-16 >seq72952 Length=1956 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||| | ||| ||||||||||| || ||||| || || | || |||| Sbjct 351 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCC 410 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||||||| || || || || ||||| ||||| || ||| | || | ||||| ||||| Sbjct 411 TCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 470 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||||| ||| || | | || | || || || || || | || || ||| Sbjct 471 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCACTTCTAATGTGATAGTT 530 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| ||||||||||||||| Sbjct 531 TTCCCTGTGAGTGTCTTTACAAAGATCTGCATA 563 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || ||||| ||||| || || || | || |||| ||||| |||||||| ||||| Sbjct 1283 TTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAA 1342 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | || |||||| | || | || || ||||| ||||| || ||| Sbjct 1343 AATAAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACGTT 1402 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | || || || | ||| ||||||||||| || |||||||| || Sbjct 1403 TTCAATAGTGTCAGATGGTTCTACCTCTAGGGTGATGGTTTTTCCTGTAAGAGTCTTAAC 1462 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 1463 AAAGATCTGCAT 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323619370272216