Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20xanthocles_20[genbank_20GCA_5F900068825.1_202017-04-27] 256,347 sequences; 198,611,823 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq82603 228 7e-54 seq43357 167 2e-35 seq3989 165 7e-35 seq6456 149 5e-30 seq124949 147 2e-29 seq72952 147 2e-29 seq47248 138 9e-27 seq15263 123 2e-22 seq24309 118 9e-21 seq56093 105 5e-17 >seq82603 Length=3401 Score = 228 bits (252), Expect = 7e-54 Identities = 385/550 (70%), Gaps = 8/550 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || |||||||| || |||||| |||||| ||||| ||||| | ||||| || Sbjct 2078 ATCGGGATTGATTTAGGTACAACATATTCTTGTGTCGGTGTGTGGCAGCACGGTAATGTG 2019 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || || || || |||||||| |||||||| || || ||||| ||| | ||||| || Sbjct 2018 GACATCATAGCGAACGATCAAGGGAACAGAACCACACCGTCTTACGTTGCCTTCACCGAT 1959 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 ||||||| || |||| || || || ||| | || | | || || | ||| || Sbjct 1958 ACTGAACGCCTAATTGGAGACGCGGCGAAAAACCAGGTTGCCTTAAACCCAATCAACACA 1899 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | ||||| || || || |||| || || | | | ||||| | | | ||| ||| Sbjct 1898 GTATTTGACGCAAAGCGGCTAATAGGCAGGAAATATGATGATCCTAAAATCCAGCAAGAC 1839 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 | || ||||||||||| || | || |||| ||| ||||| | || || |||| Sbjct 1838 CTAAAACATTGGCCTTTTAAAGTAGTAAATGAAAGTGGGAAACCAAAAATACAAATTACT 1779 Query 550295 CATGAAGGATCTGTTAAACAATTTTCACCAGAACAAAT-TTCATCTATGGTTTTAATGAA 550353 ||| ||||| ||||| ||| |||| ||| |||| || | |||||| |||| || Sbjct 1778 CATAAAGGAAAGACTAAACGTTTTGCACCTGAAGAAATAAGCAGC-ATGGTTCTAATAAA 1720 Query 550354 AATGAAACAAACAGC-CAGTGCTTTTGTTGGTCA--AGAAGTTACGGATGCAGTAATAAC 550410 ||||||| | || || | | | || ||||| | | || || || || || || Sbjct 1719 AATGAAAGAGACGGCAGAATCGTATTTGGGGTCATCCGTAAGTA--GA-GCGGTGATCAC 1663 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 || || || || || || ||||| ||||| ||||| || ||||||||||| |||||| Sbjct 1662 AGTTCCTGCCTACTTCAACGACTCTCAACGACAAGCAACAAAAGATGCTGGTACTATTGC 1603 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 ||||||||||||||||| || || || ||||||||||| || ||| | || || || | Sbjct 1602 CGGACTTAATGTTCTTCGAATCATAAACGAACCTACTGCAGCAGCATTGGCCTACGGGTT 1543 Query 550531 TGATAAACAT 550540 |||||| || Sbjct 1542 AGATAAAAAT 1533 Score = 223 bits (246), Expect = 3e-52 Identities = 538/804 (67%), Gaps = 18/804 (2%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGA 551848 ||| ||| |||||||||| || ||||| || || | | || || | | | ||| Sbjct 1425 TGGGGATACTCATCTTGGCGGAGAAGACTTCGACAGCCGCCTAGTCAACTTTTTAGCTGA 1366 Query 551849 AGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCT 551908 || |||||| ||||| | || || || | | | | ||||| || || || || Sbjct 1365 TGAGTTTAAAAGAAAACATAAGAAAGACCTCCATTCTAATTCAAAAGCGCTCCGCCGCCT 1306 Query 551909 AAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGA 551968 ||||| || || |||| || || | ||||| ||| |||| || | | || || Sbjct 1305 CAGAACAGCAGCAGAGCGAGCTAAGCGCACACTTTCTTCTAGTACGGAAGCTAACATCGA 1246 Query 551969 AGTAGATTCATTATTTGAGGGAATTGA-TTATAAT-ACGCCTATTTCGAGGGCCAAATTT 552026 | | || | |||| || || || || || || | | | ||| | ||| | | |||| Sbjct 1245 AATTGACGCTTTATACGAAGGCATAGACTTCTATTCAAGAGTATCTAGAG--CAAGATTT 1188 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 || || | | ||||| | ||| ||| ||| | || ||||||||| | | | | | | Sbjct 1187 GAGGAGCTGAATGCTGATTTATTTCGAACAACTTTAGATCCAGTAGAAAAGGCTCTTAAA 1128 Query 552087 GATTCAAAGATTGATAA--ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 || | || | || || || ||| || |||| |||||| | ||||| || || ||| Sbjct 1127 GACGCTAAACTAGACAAGAATTCAAT-TA-ATGACATTGTGTTAGTTGGAGGCTCGACAC 1070 Query 552145 GAATTCCTAAAATTCG---CGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 | ||||| ||||| | | || || || | ||||||| ||||| | ||| Sbjct 1069 GGATTCCCAAAATCCAGTCCCTTCTGCAAAATTTCT---TCAATGGAAAAAAGCTCAATT 1013 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 | | | |||||||| || || ||||| || || || ||| |||| |||||||| || Sbjct 1012 TATCTATAAATCCAGACGAAGCCGTTGCATACGGAGCTGCAGTTCAGGCAGCTATACTAA 953 Query 552262 CTGG--ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATC 552319 ||| |||||| || || | ||| | || | || || ||||| |||||| | || Sbjct 952 GTGGCGACAAAC--ATTCTAAGATCCAAGACGTTCTGCTAGTGGATGTGACTCCTTTGTC 895 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 |||||| |||| || | |||||| ||||||| || || | ||| |||| ||| || Sbjct 894 ACTTGGTATAGAGACGGCTGGAGGAGTTATGACAAAAATTGTAGATCGAAACGCTAAAAT 835 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 || || ||| | || | ||| | ||||| | |||||||| |||| || || || Sbjct 834 ACCCTGCAAACATTCCCAAACATTCACAACGTACGCTGATAATCAGCCTGCAGTCACTAT 775 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAA 552499 ||| ||| ||||||||||||| | | |||||||| || ||| | | || ||||| | Sbjct 774 ACAAGTTTATGAAGGAGAAAGAGCAATGACTAAAGACAACAATTTATTGGGGACTTTCGA 715 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559 ||| ||||| || || ||||| ||||| || || ||||| || ||||| || ||| | Sbjct 714 TTTGACGGGTATACCGCCAGCTCCACGTGGTGTTCCCCAAATAGACGTTACCTTTGATTT 655 Query 552560 CGATGCCAATGGAATTTTGAATGT 552583 ||||| |||||||| || ||||| Sbjct 654 AGATGCGAATGGAATATTAAATGT 631 >seq43357 Length=2543 Score = 167 bits (184), Expect = 2e-35 Identities = 367/548 (67%), Gaps = 4/548 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||||| || |||||||| |||||||| || |||||| |||| || Sbjct 484 GCGATTGGAATTGATTTGGGTACCACATACTCGTGTGTTGGAGTATGGCAACATGGAAAC 543 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || ||||| || || || || || | ||||| || || ||||| | ||||| Sbjct 544 GTGGAGATCATTGCTAACGACCAGGGCAATCGGACTACCCCTTCATATGTCGCGTTCACC 603 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | || || ||||| || | || | | || |||||||| || Sbjct 604 GACACAGAGCGACTCATCGGCGACGCAGCCAAGAACCAGGTCGCTCTTAATCCTAATAAC 663 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || || || || || | | | | | || | | |||| Sbjct 664 ACGGTGTTTGATGCAAAGCGATTGATCGGCCGCAAGTATGACGACCCCAAGATTCAACAG 723 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || ||| | || ||||| ||| | || | || | | ||||||||| | || ||| | Sbjct 724 GACATGCAACACTGGCCCTTCAAGGTTATCAACGACTGCGGAAAACCTAAGATCCAAGTT 783 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC--TATGGTTTTAA 550349 | ||||| | ||| |||| | || ||| || | || | ||||||| | | Sbjct 784 GATTTCAAAGGAGAGGCGAAAAAATTCGCCCCTGAAGAAGT--CAGCAGTATGGTTCTTA 841 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || ||||| ||| ||| |||| | | || |||| ||||| || | | Sbjct 842 CAAAGATGAAGGAAATAGCGGAGGCTTATCTGGGAACGCAAGTGCGCGATGCCGTCGTCA 901 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 ||||||| || || || || ||||| ||||| || || ||||||||||| ||| ||| | Sbjct 902 CTGTACCTGCTTACTTCAACGACTCTCAACGCCAGGCCACTAAAGATGCGGGAGCTATCG 961 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || || || |||||||| ||||| || ||||||||||| || || || | Sbjct 962 CAGGCCTCAACGTCCTGCGAATTATCAACGAACCCACAGCTGCTGCACTGGCCTACGGTC 1021 Query 550530 TTGATAAA 550537 |||| ||| Sbjct 1022 TTGACAAA 1029 >seq3989 Length=3941 Score = 165 bits (182), Expect = 7e-35 Identities = 253/355 (71%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 368790 AGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCC 368849 || ||| || ||||| |||||||| ||||| ||||||||||| | ||||| |||||||| Sbjct 2522 AGAAGTATTTGATTGTTGGTTTGAGTCAGGATCTATGCCTTACGCTCAAAATCATTATCC 2463 Query 368850 ATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGA 368909 ||||| || |||| | |||||| | || ||| | | | |||||| | || Sbjct 2462 CTTTGAAAATAAAAAAGAATTTGATGA-----AATATTCCCAG-CAAACTTTGTAGCTGA 2409 Query 368910 ATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTT 368969 | |||||||| || | ||||||||||| || || | || ||||| || || | || Sbjct 2408 AGGTATTGATCAGACTAGAGGTTGGTTTTACACATTAATTGTTTTATCTACTGCATTGTT 2349 Query 368970 CGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTG-TTAATGCATCTGATGGTC 369028 | ||||| | ||||||||| |||| | || ||| |||| || ||||| ||||| | Sbjct 2348 TAACAAACCTCCATTTAAAAATCTAATCGCAAATGG-ATTGATTCTGGCATCAGATGGGC 2290 Query 369029 AAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTG 369088 | || ||||| ||||| ||| |||||| | |||||| | | ||| |||| || Sbjct 2289 AGAAAATGTCCAAAAGAAAGAAAAATTATCCAGATCCTTTGGATGTTGTTGGAAAATATG 2230 Query 369089 GTGCTGATACTTTGAGATTATACCTATTGTCA--TCACCTGTAGTAAAAGCAGAA 369141 | |||||| |||| ||| | |||| |||| | ||||| || || ||||||||| Sbjct 2229 GCGCTGATGCTTTAAGACTGTACC--TTGTAAACTCACCAGTGGTTAAAGCAGAA 2177 >seq6456 Length=2491 Score = 149 bits (164), Expect = 5e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 ||||| | || | |||| ||| || ||||||||| || | || || | | |||| Sbjct 1000 AGTACCAAGTGCAAGGTAGATTCCTTTTGAATATTGTAGTCTGACAGTGTGCGTCCATCT 1059 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 |||||||||||||| ||||||||||| || || || || || ||||| ||||| |||||| Sbjct 1060 TCAAGTTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCTTCCTTATCT 1119 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTT 563442 ||||||||| ||| || ||||||||||||| | | ||| ||||||| ||| Sbjct 1120 TGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCAAGAGTAATAGTC 1179 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| ||||| || ||||||||||| Sbjct 1180 TTGCCGGTAAGTGTTTTCACAAAAATTTGCAT 1211 Score = 145 bits (160), Expect = 6e-29 Identities = 167/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || ||||| || || | ||| ||| || ||||||||| |||| ||| || Sbjct 2131 CTCAGCCGTAGTACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTA 2190 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||||||||| || ||||| ||||||||||||||||||||||| || ||||| || Sbjct 2191 CGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCC 2250 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 |||||||| ||||||||| || || ||||||||||||| | | || ||| || Sbjct 2251 TCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAG-AAGCTTCCACTTCCAG 2309 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||| || ||||| || || || || ||||||||||| Sbjct 2310 TGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 2351 Score = 141 bits (156), Expect = 7e-28 Identities = 166/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| ||||| || || ||| |||||| |||||||||||||| || ||| Sbjct 763 CTCAGTCTGAGAACAAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTT 822 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||||||||| || ||||||||||| | || || || || || ||||| ||| Sbjct 823 CGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGGGGAATGCCT 882 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432 ||||| || ||||||||| || || || |||||||||| | ||| ||| | Sbjct 883 TCTTTGTCCTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCTAC-TTCCAA 941 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | |||||| ||||| || ||||| |||||||||||||| Sbjct 942 TGTGATAGTTTTGCCAGTCAGCGTTTTCACGAAAATTTGCAT 983 Score = 138 bits (152), Expect = 9e-27 Identities = 142/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||| || || | || || | | |||||||||||||||||| ||||||||||| ||| Sbjct 1486 ATATTATAGTCTGACAGTGTGCGTCCATCTTCAAGTTGTTTTCCTGCAAAAATAAGCCTT 1545 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || || ||||||||||| ||||||||||| ||||| ||| || || || ||||| Sbjct 1546 TGTTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTAACATTTTCGATTGTG 1605 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | | || ||| | ||||| |||||| ||||| || |||||||| |||||||| Sbjct 1606 TCAG-AAGCTTCCACTTCTAAAGTAATAGTTTTGCCAGTCAGTGTTTTAACAAAAATTTG 1664 Query 563472 CAT 563474 ||| Sbjct 1665 CAT 1667 Score = 136 bits (150), Expect = 3e-26 Identities = 165/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| || || | ||| | |||| ||| || ||||||||| || | || || Sbjct 1675 CTCAGACGCAGAACTAAATGTAAGGTAGATTCCTTCTGAATATTGTAGTCTGACAGTGTA 1734 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| || || ||||| ||||||||||||||||||||||| || ||||| || Sbjct 1735 CGTCCATCTTCGAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCC 1794 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 |||||||| ||||||||| || || ||||||||||||| | | || ||| || Sbjct 1795 TCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAG-AAGCTTCCACTTCCAG 1853 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||| || ||||| || || || || ||||||||||| Sbjct 1854 TGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 1895 Score = 109 bits (120), Expect = 4e-18 Identities = 136/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||| ||||| | || || | |||||| || ||||| || ||||||||||| || Sbjct 1941 AATATTATAATCTGACAGCGTACGACCATCTTCTAGCTGTTTCCCTGCAAAAATAAGCCT 2000 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || || || |||||||| |||||||| |||||||||||| || || || ||||| Sbjct 2001 CTGTTGGTCGGGAGGAATCCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGT 2060 Query 563412 ATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 ||||| | | || ||| | |||| ||||| ||||| || || || || ||||||| Sbjct 2061 ATCAG-AAGCTTCCACTTCTAATGTAATTGTTTTGCCAGTCAGTGTCTTTACAAAAATTT 2119 Query 563471 GCAT 563474 |||| Sbjct 2120 GCAT 2123 Score = 105 bits (116), Expect = 5e-17 Identities = 142/194 (73%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | |||||| ||||||| ||||| | | |||||| | ||||| ||||| | Sbjct 1248 TTCCTTTTG-AATATTATAATCAGACAGAGTGCGTCCATCTTCTAACTGTTTGCCGGCGA 1306 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 |||| || || || || || |||||||| ||||| || || ||||||||| || || Sbjct 1307 AAATCAGCCTCTGTTGGTCTGGAGGAATGCCTTCCTTGTCCTGAATTTTTGCCTTAACAT 1366 Query 563402 CCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTA 563460 || |||||||||| | | || ||| | || | |||||| || || || ||||| Sbjct 1367 TTTCTATTGTATCAGAA-GCTTCCACTTCCAATGTGATAGTTTTGCCTGTCAGTGTTTTT 1425 Query 563461 ACGAAAATTTGCAT 563474 || ||||||||||| Sbjct 1426 ACAAAAATTTGCAT 1439 >seq124949 Length=1499 Score = 147 bits (162), Expect = 2e-29 Identities = 288/422 (68%), Gaps = 18/422 (4%) Strand=Plus/Plus Query 550160 AATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCG 550219 ||||| | ||||| |||||||||| |||||||||||||| | | ||| | ||| | Sbjct 156 AATCCAAATAATACAGTTTTTGATGCAAAACGTTTAATTGGCCGTAAATTTGAAGATCCA 215 Query 550220 ACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCT 550279 | |||| |||||| || ||||||||||| ||| |||| || || || || Sbjct 216 AAAATTCAACAAGATATAAAACATTGGCCTTTTCAAGTTGTCTCTGACGAGGGGAAGCCA 275 Query 550280 TATATTGAAGCTACTCATGAAGGATCTGTTAAACA---ATTTTCA--CCAGAACAAATTT 550334 | || | || | | ||||| || || | |||| |||||| |||||| Sbjct 276 AAAATAGTAGTAAACTACAAAGGAG-----AATCACGCAGATTCAGCCCAGAAGAAATTT 330 Query 550335 CATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTA 550394 | || |||||||| | |||||||||| ||| || | | | ||| | || | Sbjct 331 CGTCAATGGTTTTGACGAAAATGAAAGAAATCGCTGAAACGTACCTCGGTGGAATGGTCA 390 Query 550395 CGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAG 550454 || || || |||| ||||||||||||||||||||| ||||||| || || || || | Sbjct 391 AAGACGCGGTCGTAACCGTACCAGCATATTTTAATGACGCACAACGCCAGGCAACGAAGG 450 Query 550455 ATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTG 550514 | || || |||||| | ||||||||| | | ||||| |||||||| || || || | Sbjct 451 ACGCCGGTGTTATTGCCGCACTTAATGTCTTGAGAATTATTAATGAACCAACAGCAGCAG 510 Query 550515 CACTTGCATATGGACTTGATAAACATAATGA----TCAAGAACTTAATGTACTCATCTTT 550570 | || |||||||| | |||| | | | ||| | || || ||||||||||| ||| Sbjct 511 CTCTCGCATATGGTTTAGATAGAGA-ATTGAGAGGTGAAAAA---AATGTACTCATTTTT 566 Query 550571 GA 550572 || Sbjct 567 GA 568 >seq72952 Length=1956 Score = 147 bits (162), Expect = 2e-29 Identities = 165/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA 563318 ||| ||||| || |||||||| |||||| ||||||||| |||| ||| || | Sbjct 1031 ACGCAGTACCAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCAGATAGGGTGCGACC 1090 Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| | ||| || || ||||| || || | ||| ||||| |||||||| |||||||| Sbjct 1091 ATCTTCCAATTGCTTACCAGCAAAGATGAGACGTTGTTGATCTGGAGGAATGCCTTCTTT 1150 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAA 563437 ||||||||||| ||||| |||||||| |||| | ||| ||| | ||||| Sbjct 1151 GTCTTGAATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTAC-TTCTAAAGTAA 1209 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| |||||||| |||||||| |||||||||||| Sbjct 1210 TTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCATA 1247 Score = 132 bits (146), Expect = 4e-25 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | ||| | ||||| ||| |||||| ||| |||||||||| ||||| | Sbjct 1485 AGACGTAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAATCAGAAAGAGTGCGA 1544 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||| || || ||||| ||||| | ||||||||||| || || || ||| Sbjct 1545 CCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCT 1604 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || ||||| ||||| |||||| ||||| ||||||| | | | || ||| ||||| Sbjct 1605 TTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAG-GGTTCCACTTCTAGAGT 1663 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || ||||| || |||||||| ||||| |||||| Sbjct 1664 AATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 1703 Score = 125 bits (138), Expect = 6e-23 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA 563318 ||| ||||| | ||| | ||| |||||| || ||||| |||| || || | Sbjct 1715 ACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACC 1774 Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| | ||| || || || |||||||| | ||| ||||| |||||||| |||||||| Sbjct 1775 ATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTT 1834 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAG-TACATTCGAGAGTAA 563437 ||||| ||||| ||||| |||||||| |||| | ||| ||| | ||||| Sbjct 1835 GTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCTAC-TTCTAAAGTAA 1893 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| |||||||| |||||||| |||||||||||| Sbjct 1894 TTGTTTTTCCAGTAAGTGTTTTAACAAAAATTTGCATA 1931 Score = 122 bits (134), Expect = 7e-22 Identities = 163/222 (73%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| ||||||||||||||||| ||| ||||| || ||||| || | || ||||| Sbjct 801 AGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGG--ATGTTGTAGTCCGATAAAGTTC 858 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||| || || || |||||||| || || | ||| ||||| |||||||| || | Sbjct 859 GCCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGAATACCCT 918 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 ||||||||||||| || ||||| ||||| || |||| || | || || ||| Sbjct 919 CTTTATCTTGAATCTTAGCCTTTACGTTTTCAATGGTGTCAG-ATGGCTCCACCTCTAGA 977 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || || ||||| || || || || ||||||||| Sbjct 978 GTTATGGTCTTTCCTGTAAGTGTCTTGACAAATATTTGCATA 1019 Score = 118 bits (130), Expect = 9e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | ||| | ||| || ||| ||| || |||||| ||||||| ||| || | Sbjct 1257 AGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGG 1316 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||||||||| ||||||||||| || || || || || ||||| |||||| Sbjct 1317 CCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGGTCTGGGGGAATACCTTCT 1376 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| || ||| || || ||||| || |||| || ||| || || || Sbjct 1377 TTGTCTTGGATCTTTGCCTTCACGTTTTCAATAGTGTCAGATGGTTCTAC-CTCTAGGGT 1435 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| || |||||||| ||||| || || ||||| Sbjct 1436 GATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 1474 Score = 100 bits (110), Expect = 2e-15 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||||||||| | |||||||| ||| | | ||| ||||||||||||| | ||| | Sbjct 573 AGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGG--ATATTGTAATCAGACAAAGTGC 630 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||| | ||| || || |||||||| || | || || || || ||||| |||| Sbjct 631 GACCATCTTCCAATTGCTTACCAGCAAAAATGAGACGCTGTTGGTCTGGGGGAATGCCTT 690 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGA 563433 | ||||| || ||||| || || ||| ||||| |||| || ||| ||| || Sbjct 691 CCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTAC-TTCCAGG 749 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| || || || || | ||||| || || ||||||||| Sbjct 750 GTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTGCATA 791 >seq47248 Length=2295 Score = 138 bits (152), Expect = 9e-27 Identities = 392/597 (66%), Gaps = 14/597 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||| | || |||||||| ||||||||||| |||||| ||||||| Sbjct 1909 GCTATTGGAATTGATCTTGGCACCACATACTCCTGTGTTGGTGTGTGGCAACATGGTAAC 1850 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| || |||||||| ||||||||| | || || || || || || |||| || Sbjct 1849 GTGGAAATCATCGCCAATGACCAAGGTAACCGTACAACACCTTCATACGTCGCTTTTACT 1790 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | || |||| ||||| || ||| |||| || || || | ||| Sbjct 1789 GACACCGAGCGCTTGATTGGCGATGCGGCGAAAAGCCAAGTGGCTTTGAACCCCAACAAC 1730 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| || || ||| | | || ||| | | || | || | |||| Sbjct 1729 ACGGTTTTCGACGCGAAAAGGCTGATCGGACGCAAATTCGACGACGAAAAGATTCAACAG 1670 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 |||||||| || ||||| || | | | |||| || | || || | || | | | Sbjct 1669 GATATGAAACACTGGCCATTTAAGGTGATCAATGATTGCAGTAAGCCAAAAATCCAGGTT 1610 Query 550292 --ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAAT-TTCATCTATGGTTTTA 550348 | ||| |||| || |||| |||| | || ||| | || || | |||||||| Sbjct 1609 GAATTCA--AAGGCGAAGTCAAACGATTTGCCCCTGAAGAGATCAGCAGC-ATGGTTTTG 1553 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || ||||| ||||||| || | | |||| | || || || || || Sbjct 1552 ACAAAGATGAAGGAAACAGCAGAGGCATATCTTGGCACATCTATTCGAGACGCCGTCATC 1493 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || || || || || || || || || ||||||||| || Sbjct 1492 ACAGTTCCCGCTTACTTCAACGATTCCCAGCGACAGGCAACGAAGGATGCTGGAGCCATA 1433 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | || || || | || ||||| ||||| || ||||| || | |||||||| Sbjct 1432 GCTGGCTTAAACGTCCTCAGAATCATCAACGAACCCACAGCTGCAGCTTTGGCATATGGC 1373 Query 550529 CTTGATAAACAT----AATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 | ||||| || || | |||| |||||||| ||||||||| |||||| Sbjct 1372 TTGGATAAGAATTTAAAAGGCGAAAGA----AATGTACTAATCTTTGATCTTGGAGG 1320 >seq15263 Length=1266 Score = 123 bits (136), Expect = 2e-22 Identities = 125/160 (78%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| |||| |||||| | || ||||| || ||||| || |||| ||| |||| || Sbjct 338 AGCTGTAGGAATAGATCTTGGCACCACGTACTCCTGTGTAGGAGTTTTCCAACATGGAAA 279 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||||||||||||| || ||||| || ||||| || ||||| |||||| |||| | Sbjct 278 AGTTGAAATTATTGCCAACGACCAAGGAAATAGAACCACACCATCGTATGTTGCTTTTAA 219 Query 550111 GGAAACTGAAC-ATTTAGTTGGTGATGCAGCAAAATATCA 550149 || ||||||| | ||| | || |||||||| ||| |||| Sbjct 218 TGATACTGAACGACTTA-TCGGAGATGCAGCCAAAAATCA 180 >seq24309 Length=2694 Score = 118 bits (130), Expect = 9e-21 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| | || ||| ||||||| ||||||| | | |||||||| |||| || ||| Sbjct 681 TTTGCTCCTGAAGAAATTTCGGCTATGGTCCTTACTAAAATGAAGGAAACCGCTGAAGCT 740 Query 550376 TTTGTTGGTCAAGAAGTT-ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTC 550434 | | |||| ||||||| | || | || || | ||||||||||| || || || ||| | Sbjct 741 TATCTTGG-CAAGAAGGTCACTCACGCTGTTGTCACTGTACCAGCCTACTTCAACGACGC 799 Query 550435 ACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTAT 550494 ||||||||||| || ||||| ||||| ||| || || |||||||| | | || || Sbjct 800 TCAACGTCAAGCCACCAAAGACGCTGGTGTTATCGCCGGTCTTAATGTGATGAGAATCAT 859 Query 550495 CAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||| || ||||||||||| || | || || || ||||| || Sbjct 860 CAACGAGCCTACTGCTGCCGCTATCGCTTACGGTCTTGACAA 901 >seq56093 Length=3271 Score = 105 bits (116), Expect = 5e-17 Identities = 237/356 (67%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| ||||| | || || | | || | ||| | |||||||| || || |||||| Sbjct 1277 GATGCCAAACGACTTATCGGTCGCAAATTCGAGGATGCTACTGTTCAAGCTGACATGAAG 1336 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAA 550300 || ||||| ||| || | || | || | || ||||| | ||| | | || | || Sbjct 1337 CACTGGCCATTCGAAGTGGTCAGTGATGGAGGCAAACCAAAGATTCAGGTATCTTACAAA 1396 Query 550301 GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAA 550360 || | ||| || | || ||| || | || ||||| | | || ||||| Sbjct 1397 GGTGAAGACAAAACCTTCTTCCCTGAAGAAGTAAGCTCAATGGTGCTTACAAAGATGAAG 1456 Query 550361 CAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCA 550420 ||||||| || | | || || ||| | ||||||| || || || |||||| Sbjct 1457 GAAACAGCTGAGGCGTACCTCGGCAAAACAGTGCAGAATGCAGTCATCACGGTTCCAGCA 1516 Query 550421 TATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAAT 550480 ||||| | ||||| ||| | || || || |||||||| || || |||| || || Sbjct 1517 TATTTCAGCGACTCGCAAAGACAGGCCACAAAAGATGCAGGCACCATCTCTGGTCTGAAC 1576 Query 550481 GTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| || |||||||||||||| ||||||||||| |||| || || || || || Sbjct 1577 GTTCTCCGAATTATCAATGAACCCACTGCTGCTGCGATTGCGTACGGTCTAGACAA 1632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4015739214515030